RNA–Protein interactions for RNA: ENST00000250066.6

USP6-201, Transcript of ubiquitin specific peptidase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP6, Length 7,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-201ENST00000250066 HSP90B1P14625 803 aaKnown RBP10.89□□□□□ -0.67
USP6-201ENST00000250066 ZNF771Q7L3S4 317 aaPredicted RBP10.89□□□□□ -0.67
USP6-201ENST00000250066 PHF14O94880 888 aa10.89□□□□□ -0.67
USP6-201ENST00000250066 CSPP1Q1MSJ5 1256 aa10.88□□□□□ -0.67
USP6-201ENST00000250066 CCAR2Q8N163 923 aaKnown RBP10.88□□□□□ -0.67
USP6-201ENST00000250066 PES1O00541 588 aaKnown RBP10.87□□□□□ -0.67
USP6-201ENST00000250066 APPP05067 770 aa10.87□□□□□ -0.67
USP6-201ENST00000250066 GOLGA6L3A6NEY3 463 aa10.86□□□□□ -0.67
USP6-201ENST00000250066 SCRIBQ14160 1630 aa10.86□□□□□ -0.67
USP6-201ENST00000250066 WWC1Q8IX03 1113 aa10.86□□□□□ -0.67
USP6-201ENST00000250066 B4GALNT3Q6L9W6 998 aa10.86□□□□□ -0.67
USP6-201ENST00000250066 HMMRO75330 724 aa10.85□□□□□ -0.67
USP6-201ENST00000250066 TEX35Q5T0J7 233 aa10.85□□□□□ -0.67
USP6-201ENST00000250066 CALD1Q05682 793 aaKnown RBP10.85□□□□□ -0.67
USP6-201ENST00000250066 VSIG10Q8N0Z9 540 aa10.85□□□□□ -0.67
USP6-201ENST00000250066 TMX4Q9H1E5 349 aaPredicted RBP10.84□□□□□ -0.67
USP6-201ENST00000250066 TPD52L1Q16890 204 aaPredicted RBP10.84□□□□□ -0.67
USP6-201ENST00000250066 U2SURPO15042 1029 aaKnown RBP10.84□□□□□ -0.67
USP6-201ENST00000250066 MAP7D2Q96T17 732 aa10.83□□□□□ -0.68
USP6-201ENST00000250066 NOM1Q5C9Z4 860 aaKnown RBP10.83□□□□□ -0.68
USP6-201ENST00000250066 TPM1P09493 284 aa10.82□□□□□ -0.68
USP6-201ENST00000250066 VPS53Q5VIR6 699 aa10.82□□□□□ -0.68
USP6-201ENST00000250066 SLKQ9H2G2 1235 aaPredicted RBP10.82□□□□□ -0.68
USP6-201ENST00000250066 RSPH6AQ9H0K4 717 aa10.81□□□□□ -0.68
USP6-201ENST00000250066 APBB1O00213 710 aa10.81□□□□□ -0.68
USP6-201ENST00000250066 MARCH6O60337 910 aa10.81□□□□□ -0.68
USP6-201ENST00000250066 RGL3Q3MIN7 710 aa10.81□□□□□ -0.68
USP6-201ENST00000250066 CNKSR2Q8WXI2 1034 aa10.8□□□□□ -0.68
USP6-201ENST00000250066 TPM2P07951 284 aa10.8□□□□□ -0.68
USP6-201ENST00000250066 GOLGA6L19H0YKK7 550 aa10.8□□□□□ -0.68
USP6-201ENST00000250066 CCDC191Q8NCU4 936 aa10.8□□□□□ -0.68
USP6-201ENST00000250066 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.79□□□□□ -0.68
USP6-201ENST00000250066 GPATCH3Q96I76 525 aa10.79□□□□□ -0.68
USP6-201ENST00000250066 SF3A1Q15459 793 aaKnown RBP10.79□□□□□ -0.68
USP6-201ENST00000250066 CSRNP3Q8WYN3 585 aa10.79□□□□□ -0.68
USP6-201ENST00000250066 GORABQ5T7V8 394 aa10.79□□□□□ -0.68
USP6-201ENST00000250066 POGKQ9P215 609 aa10.78□□□□□ -0.68
USP6-201ENST00000250066 IPO7O95373 1038 aaKnown RBP10.77□□□□□ -0.68
USP6-201ENST00000250066 KIF3AQ9Y496 699 aa10.77□□□□□ -0.69
USP6-201ENST00000250066 CDR1P51861 262 aa10.77□□□□□ -0.69
USP6-201ENST00000250066 RTF1Q92541 710 aaKnown RBP10.77□□□□□ -0.69
USP6-201ENST00000250066 RUFY1Q96T51 708 aa10.77□□□□□ -0.69
USP6-201ENST00000250066 STK11IPQ8N1F8 1099 aa10.76□□□□□ -0.69
USP6-201ENST00000250066 IPO8O15397 1037 aaKnown RBP10.75□□□□□ -0.69
USP6-201ENST00000250066 AK7Q96M32 723 aa10.75□□□□□ -0.69
USP6-201ENST00000250066 MTUS2Q5JR59 1369 aa10.75□□□□□ -0.69
USP6-201ENST00000250066 RDXP35241 583 aaKnown RBP10.75□□□□□ -0.69
USP6-201ENST00000250066 TRIM6-TRIM34B2RNG4 842 aa10.75□□□□□ -0.69
USP6-201ENST00000250066 G3V3G9 751 aa10.75□□□□□ -0.69
USP6-201ENST00000250066 DCAF8Q5TAQ9 597 aa10.75□□□□□ -0.69
USP6-201ENST00000250066 ZNF592Q92610 1267 aa10.75□□□□□ -0.69
USP6-201ENST00000250066 KIF16BQ96L93 1317 aa10.74□□□□□ -0.69
USP6-201ENST00000250066 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.74□□□□□ -0.69
USP6-201ENST00000250066 NACADO15069 1562 aa10.74□□□□□ -0.69
USP6-201ENST00000250066 BECN2A8MW95 431 aa10.74□□□□□ -0.69
USP6-201ENST00000250066 CARD11Q9BXL7 1154 aa10.74□□□□□ -0.69
USP6-201ENST00000250066 CC2D1BQ5T0F9 858 aaKnown RBP10.74□□□□□ -0.69
USP6-201ENST00000250066 TCEAL9Q9UHQ7 104 aa10.74□□□□□ -0.69
USP6-201ENST00000250066 DCTN1Q14203 1278 aa10.73□□□□□ -0.69
USP6-201ENST00000250066 TCERG1O14776 1098 aaKnown RBP10.73□□□□□ -0.69
USP6-201ENST00000250066 H0YHG0 523 aa10.72□□□□□ -0.69
USP6-201ENST00000250066 CHMP3Q9Y3E7 222 aa10.72□□□□□ -0.69
USP6-201ENST00000250066 RBM19Q9Y4C8 960 aaKnown RBP10.72□□□□□ -0.69
USP6-201ENST00000250066 PCMTD1Q96MG8 357 aaPredicted RBP10.72□□□□□ -0.69
USP6-201ENST00000250066 H3BQV1 296 aa10.71□□□□□ -0.69
USP6-201ENST00000250066 IFFO2Q5TF58 517 aa10.71□□□□□ -0.69
USP6-201ENST00000250066 ZNF330Q9Y3S2 320 aaPredicted RBP10.71□□□□□ -0.69
USP6-201ENST00000250066 ODF2Q5BJF6 829 aa10.71□□□□□ -0.69
USP6-201ENST00000250066 PLCD4Q9BRC7 762 aa10.71□□□□□ -0.7
USP6-201ENST00000250066 RRP7BPQ9NSQ0 103 aa10.71□□□□□ -0.7
USP6-201ENST00000250066 HOMER1Q86YM7 354 aa10.71□□□□□ -0.7
USP6-201ENST00000250066 SOX12O15370 315 aa10.7□□□□□ -0.7
USP6-201ENST00000250066 ST18O60284 1047 aa10.7□□□□□ -0.7
USP6-201ENST00000250066 ACBD3Q9H3P7 528 aa10.7□□□□□ -0.7
USP6-201ENST00000250066 ANKRD20A12PQ8NF67 263 aa10.7□□□□□ -0.7
USP6-201ENST00000250066 HSP90B2PQ58FF3 399 aa10.7□□□□□ -0.7
USP6-201ENST00000250066 DDX11L8A8MPP1 907 aa10.69□□□□□ -0.7
USP6-201ENST00000250066 RWDD1Q9H446 243 aaPredicted RBP10.69□□□□□ -0.7
USP6-201ENST00000250066 MFAP1P55081 439 aaKnown RBP10.69□□□□□ -0.7
USP6-201ENST00000250066 CWC15Q9P013 229 aaKnown RBP10.69□□□□□ -0.7
USP6-201ENST00000250066 TOMM22Q9NS69 142 aa10.69□□□□□ -0.7
USP6-201ENST00000250066 NOL8Q76FK4 1167 aaKnown RBP10.68□□□□□ -0.7
USP6-201ENST00000250066 CT47A1Q5JQC4 288 aaPredicted RBP10.68□□□□□ -0.7
USP6-201ENST00000250066 AKAP17AQ02040 695 aaKnown RBP10.68□□□□□ -0.7
USP6-201ENST00000250066 ZRSR2Q15696 482 aaKnown RBP10.68□□□□□ -0.7
USP6-201ENST00000250066 FAM13BQ9NYF5 915 aa10.68□□□□□ -0.7
USP6-201ENST00000250066 ITPRIPQ8IWB1 547 aa10.68□□□□□ -0.7
USP6-201ENST00000250066 FRAT2O75474 233 aaPredicted RBP10.67□□□□□ -0.7
USP6-201ENST00000250066 ATP6V1DQ9Y5K8 247 aa10.67□□□□□ -0.7
USP6-201ENST00000250066 MEX3CQ5U5Q3 659 aaKnown RBP10.67□□□□□ -0.7
USP6-201ENST00000250066 HDAC5Q9UQL6 1122 aa10.67□□□□□ -0.7
USP6-201ENST00000250066 FAM184AQ8NB25 1140 aa10.67□□□□□ -0.7
USP6-201ENST00000250066 ARGLU1Q9NWB6 273 aaPredicted RBP10.67□□□□□ -0.7
USP6-201ENST00000250066 CHMP4AQ9BY43 222 aa10.67□□□□□ -0.7
USP6-201ENST00000250066 FOXD4L5Q5VV16 416 aaPredicted RBP10.66□□□□□ -0.7
USP6-201ENST00000250066 FOXD4L4Q8WXT5 416 aaPredicted RBP10.66□□□□□ -0.7
USP6-201ENST00000250066 FOXD4L1Q9NU39 408 aa10.66□□□□□ -0.7
USP6-201ENST00000250066 NEXNQ0ZGT2 675 aa10.66□□□□□ -0.7
USP6-201ENST00000250066 HSP90AB3PQ58FF7 597 aa10.66□□□□□ -0.7
USP6-201ENST00000250066 NAP1L1P55209 391 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms