RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 GPATCH8Q9UKJ3 1502 aaKnown RBP21.19■□□□□ 0.98
MBD4-201ENST00000249910 CHD1O14646 1710 aa21.19■□□□□ 0.98
MBD4-201ENST00000249910 ABCA8O94911 1581 aa21.18■□□□□ 0.98
MBD4-201ENST00000249910 TONSLQ96HA7 1378 aa21.17■□□□□ 0.98
MBD4-201ENST00000249910 MPHOSPH9Q99550 1183 aa21.16■□□□□ 0.98
MBD4-201ENST00000249910 TIMELESSQ9UNS1 1208 aa21.16■□□□□ 0.98
MBD4-201ENST00000249910 DENND4BO75064 1496 aaPredicted RBP21.13■□□□□ 0.97
MBD4-201ENST00000249910 SCAF1Q9H7N4 1312 aaKnown RBP21.13■□□□□ 0.97
MBD4-201ENST00000249910 CAMSAP2Q08AD1 1489 aa21.13■□□□□ 0.97
MBD4-201ENST00000249910 AKNAQ7Z591 1439 aa21.12■□□□□ 0.97
MBD4-201ENST00000249910 ERCC6L2Q5T890 1561 aa21.12■□□□□ 0.97
MBD4-201ENST00000249910 ACIN1Q9UKV3 1341 aaKnown RBP21.12■□□□□ 0.97
MBD4-201ENST00000249910 ROCK1Q13464 1354 aa21.09■□□□□ 0.97
MBD4-201ENST00000249910 DNMT1P26358 1616 aaKnown RBP21.09■□□□□ 0.97
MBD4-201ENST00000249910 GCC2Q8IWJ2 1684 aa21.07■□□□□ 0.96
MBD4-201ENST00000249910 CENPBP07199 599 aaPredicted RBP21.06■□□□□ 0.96
MBD4-201ENST00000249910 HNRNPMP52272 730 aaKnown RBP eCLIP21.06■□□□□ 0.96
MBD4-201ENST00000249910 SLC4A1APQ9BWU0 796 aaKnown RBP21.06■□□□□ 0.96
MBD4-201ENST00000249910 NCOA1Q15788 1441 aa21.05■□□□□ 0.96
MBD4-201ENST00000249910 ABCC10Q5T3U5 1492 aa21.05■□□□□ 0.96
MBD4-201ENST00000249910 DDX10Q13206 875 aaKnown RBP21.04■□□□□ 0.96
MBD4-201ENST00000249910 KCNH8Q96L42 1107 aa21.04■□□□□ 0.96
MBD4-201ENST00000249910 ADCY10Q96PN6 1610 aa21.03■□□□□ 0.96
MBD4-201ENST00000249910 ITSN2Q9NZM3 1697 aa21■□□□□ 0.95
MBD4-201ENST00000249910 SHROOM2Q13796 1616 aa20.99■□□□□ 0.95
MBD4-201ENST00000249910 TSPY4P0CV99 314 aa20.98■□□□□ 0.95
MBD4-201ENST00000249910 TSPY10P0CW01 314 aa20.98■□□□□ 0.95
MBD4-201ENST00000249910 L3MBTL2Q969R5 705 aa20.98■□□□□ 0.95
MBD4-201ENST00000249910 CDC42BPAQ5VT25 1732 aa20.97■□□□□ 0.95
MBD4-201ENST00000249910 ANKRD30AQ9BXX3 1397 aa20.96■□□□□ 0.95
MBD4-201ENST00000249910 ANKRD30BQ9BXX2 1392 aa20.95■□□□□ 0.94
MBD4-201ENST00000249910 KDM5BQ9UGL1 1544 aa20.94■□□□□ 0.94
MBD4-201ENST00000249910 C9orf84Q5VXU9 1444 aa20.93■□□□□ 0.94
MBD4-201ENST00000249910 ANKRD50Q9ULJ7 1429 aa20.93■□□□□ 0.94
MBD4-201ENST00000249910 GTF3C3Q9Y5Q9 886 aa20.91■□□□□ 0.94
MBD4-201ENST00000249910 PKD2Q13563 968 aa20.9■□□□□ 0.94
MBD4-201ENST00000249910 ABCC2Q92887 1545 aa20.9■□□□□ 0.94
MBD4-201ENST00000249910 ADGRL2O95490 1459 aa20.89■□□□□ 0.94
MBD4-201ENST00000249910 CLASP1Q7Z460 1538 aa20.89■□□□□ 0.93
MBD4-201ENST00000249910 PZPP20742 1482 aa20.88■□□□□ 0.93
MBD4-201ENST00000249910 MBD5Q9P267 1494 aa20.88■□□□□ 0.93
MBD4-201ENST00000249910 NUP155O75694 1391 aa20.87■□□□□ 0.93
MBD4-201ENST00000249910 KIF15Q9NS87 1388 aa20.86■□□□□ 0.93
MBD4-201ENST00000249910 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.85■□□□□ 0.932e-7■■■□□ 19.1
MBD4-201ENST00000249910 NBPF8Q3BBV2 869 aa20.84■□□□□ 0.93
MBD4-201ENST00000249910 TTC37Q6PGP7 1564 aa20.84■□□□□ 0.93
MBD4-201ENST00000249910 CROCC2H7BZ55 1655 aa20.83■□□□□ 0.93
MBD4-201ENST00000249910 CDC42BPBQ9Y5S2 1711 aa20.83■□□□□ 0.92
MBD4-201ENST00000249910 RPRD2Q5VT52 1461 aaKnown RBP20.83■□□□□ 0.92
MBD4-201ENST00000249910 SAMD9LQ8IVG5 1584 aa20.83■□□□□ 0.92
MBD4-201ENST00000249910 ARHGAP5Q13017 1502 aa20.82■□□□□ 0.92
MBD4-201ENST00000249910 HSPA5P11021 654 aaKnown RBP20.82■□□□□ 0.92
MBD4-201ENST00000249910 ADGBQ8N7X0 1667 aa20.81■□□□□ 0.92
MBD4-201ENST00000249910 SHANK2Q9UPX8 1470 aa20.8■□□□□ 0.92
MBD4-201ENST00000249910 CCDC141Q6ZP82 1450 aa20.79■□□□□ 0.92
MBD4-201ENST00000249910 SYCP2Q9BX26 1530 aa20.79■□□□□ 0.92
MBD4-201ENST00000249910 ZNF326Q5BKZ1 582 aaKnown RBP20.78■□□□□ 0.92
MBD4-201ENST00000249910 KIAA1107Q9UPP5 1409 aa20.78■□□□□ 0.92
MBD4-201ENST00000249910 RSPH4AQ5TD94 716 aa20.78■□□□□ 0.92
MBD4-201ENST00000249910 PREX2Q70Z35 1606 aa20.78■□□□□ 0.92
MBD4-201ENST00000249910 PRKCSHP14314 528 aaPredicted RBP20.77■□□□□ 0.92
MBD4-201ENST00000249910 EIF4G2P78344 907 aaKnown RBP eCLIP20.77■□□□□ 0.91
MBD4-201ENST00000249910 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.76■□□□□ 0.911e-9■■■□□ 16.7
MBD4-201ENST00000249910 TEX14Q8IWB6 1497 aa20.75■□□□□ 0.91
MBD4-201ENST00000249910 ZCCHC11Q5TAX3 1644 aaKnown RBP20.74■□□□□ 0.91
MBD4-201ENST00000249910 ARHGEF5Q12774 1597 aa20.74■□□□□ 0.91
MBD4-201ENST00000249910 WASHC2AQ641Q2 1341 aa20.73■□□□□ 0.91
MBD4-201ENST00000249910 EFCAB2Q5VUJ9 269 aa20.73■□□□□ 0.91
MBD4-201ENST00000249910 ARHGEF12Q9NZN5 1544 aa20.72■□□□□ 0.91
MBD4-201ENST00000249910 UHRF1BP1LA0JNW5 1464 aa20.72■□□□□ 0.91
MBD4-201ENST00000249910 C11orf95C9JLR9 678 aaPredicted RBP20.71■□□□□ 0.91
MBD4-201ENST00000249910 OSCARQ8IYS5 282 aa20.71■□□□□ 0.91
MBD4-201ENST00000249910 PLCH2O75038 1416 aa20.71■□□□□ 0.91
MBD4-201ENST00000249910 ANP32CO43423 234 aa20.7■□□□□ 0.9
MBD4-201ENST00000249910 AFAP1Q8N556 730 aa20.7■□□□□ 0.9
MBD4-201ENST00000249910 KDM2AQ9Y2K7 1162 aa20.67■□□□□ 0.9
MBD4-201ENST00000249910 MYO5CQ9NQX4 1742 aa20.65■□□□□ 0.9
MBD4-201ENST00000249910 TRAPPC8Q9Y2L5 1435 aa20.65■□□□□ 0.9
MBD4-201ENST00000249910 PLEKHH2Q8IVE3 1493 aa20.64■□□□□ 0.9
MBD4-201ENST00000249910 DCAF11Q8TEB1 546 aa20.61■□□□□ 0.89
MBD4-201ENST00000249910 RGL3Q3MIN7 710 aa20.6■□□□□ 0.89
MBD4-201ENST00000249910 FAM135AQ9P2D6 1515 aa20.6■□□□□ 0.89
MBD4-201ENST00000249910 WDR7Q9Y4E6 1490 aa20.6■□□□□ 0.89
MBD4-201ENST00000249910 SPAG9O60271 1321 aaKnown RBP20.58■□□□□ 0.88
MBD4-201ENST00000249910 MYT1LQ9UL68 1186 aa20.58■□□□□ 0.88
MBD4-201ENST00000249910 KDM5DQ9BY66 1539 aa20.57■□□□□ 0.88
MBD4-201ENST00000249910 SPATA31E1Q6ZUB1 1445 aa20.56■□□□□ 0.88
MBD4-201ENST00000249910 ASXL2Q76L83 1435 aa20.56■□□□□ 0.88
MBD4-201ENST00000249910 POLR3GLQ9BT43 218 aa20.55■□□□□ 0.88
MBD4-201ENST00000249910 CCDC7Q96M83 1385 aa20.54■□□□□ 0.88
MBD4-201ENST00000249910 NPM1P06748 294 aaKnown RBP eCLIP20.54■□□□□ 0.88
MBD4-201ENST00000249910 BCL11AQ9H165 835 aa20.54■□□□□ 0.88
MBD4-201ENST00000249910 ABCC1P33527 1531 aa20.54■□□□□ 0.88
MBD4-201ENST00000249910 CCER2I3L3R5 266 aa20.53■□□□□ 0.88
MBD4-201ENST00000249910 KIF7Q2M1P5 1343 aa20.53■□□□□ 0.88
MBD4-201ENST00000249910 MAST1Q9Y2H9 1570 aa20.53■□□□□ 0.88
MBD4-201ENST00000249910 FANCAO15360 1455 aa20.52■□□□□ 0.88
MBD4-201ENST00000249910 USP47Q96K76 1375 aa20.52■□□□□ 0.87
MBD4-201ENST00000249910 CARD11Q9BXL7 1154 aa20.51■□□□□ 0.87
MBD4-201ENST00000249910 CCDC144AA2RUR9 1427 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms