RNA–Protein interactions for RNA: ENST00000248484.8

TNFRSF19-201, Transcript of TNF receptor superfamily member 19, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF19, Length 3,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF19-201ENST00000248484 IRX6P78412 446 aaPredicted RBP13.32□□□□□ -0.28
TNFRSF19-201ENST00000248484 HECW1Q76N89 1606 aa13.31□□□□□ -0.28
TNFRSF19-201ENST00000248484 NPM1P06748 294 aaKnown RBP eCLIP13.31□□□□□ -0.28
TNFRSF19-201ENST00000248484 ERCC6L2Q5T890 1561 aa13.31□□□□□ -0.28
TNFRSF19-201ENST00000248484 MAP3K1Q13233 1512 aa13.3□□□□□ -0.28
TNFRSF19-201ENST00000248484 TONSLQ96HA7 1378 aa13.3□□□□□ -0.28
TNFRSF19-201ENST00000248484 SENP3Q9H4L4 574 aaPredicted RBP13.3□□□□□ -0.28
TNFRSF19-201ENST00000248484 MPHOSPH9Q99550 1183 aa13.28□□□□□ -0.28
TNFRSF19-201ENST00000248484 ARHGEF11O15085 1522 aa13.28□□□□□ -0.28
TNFRSF19-201ENST00000248484 EHBP1L1Q8N3D4 1523 aa13.28□□□□□ -0.28
TNFRSF19-201ENST00000248484 CFAP43Q8NDM7 1665 aa13.28□□□□□ -0.28
TNFRSF19-201ENST00000248484 KDM2AQ9Y2K7 1162 aa13.28□□□□□ -0.28
TNFRSF19-201ENST00000248484 ATP10BO94823 1461 aa13.27□□□□□ -0.28
TNFRSF19-201ENST00000248484 LRRIQ1Q96JM4 1722 aa13.27□□□□□ -0.28
TNFRSF19-201ENST00000248484 TROQ12816 1431 aaPredicted RBP13.26□□□□□ -0.29
TNFRSF19-201ENST00000248484 ANP32CO43423 234 aa13.26□□□□□ -0.29
TNFRSF19-201ENST00000248484 SUPT6HQ7KZ85 1726 aaKnown RBP13.26□□□□□ -0.29
TNFRSF19-201ENST00000248484 RAPGEF6Q8TEU7 1601 aa13.25□□□□□ -0.29
TNFRSF19-201ENST00000248484 CHD1O14646 1710 aa13.25□□□□□ -0.29
TNFRSF19-201ENST00000248484 RGL3Q3MIN7 710 aa13.24□□□□□ -0.29
TNFRSF19-201ENST00000248484 NAIPQ13075 1403 aa13.23□□□□□ -0.29
TNFRSF19-201ENST00000248484 UACAQ9BZF9 1416 aa13.23□□□□□ -0.29
TNFRSF19-201ENST00000248484 AFAP1Q8N556 730 aa13.23□□□□□ -0.29
TNFRSF19-201ENST00000248484 PTPN23Q9H3S7 1636 aa13.23□□□□□ -0.29
TNFRSF19-201ENST00000248484 PKD2Q13563 968 aa13.23□□□□□ -0.29
TNFRSF19-201ENST00000248484 RBM19Q9Y4C8 960 aaKnown RBP13.23□□□□□ -0.29
TNFRSF19-201ENST00000248484 BCL11AQ9H165 835 aa13.19□□□□□ -0.3
TNFRSF19-201ENST00000248484 ABCC5O15440 1437 aa13.19□□□□□ -0.3
TNFRSF19-201ENST00000248484 KIF14Q15058 1648 aa13.19□□□□□ -0.3
TNFRSF19-201ENST00000248484 HNRNPUQ00839 825 aaKnown RBP eCLIP13.19□□□□□ -0.3
TNFRSF19-201ENST00000248484 GPATCH8Q9UKJ3 1502 aaKnown RBP13.18□□□□□ -0.3
TNFRSF19-201ENST00000248484 L3MBTL2Q969R5 705 aa13.18□□□□□ -0.3
TNFRSF19-201ENST00000248484 DAPK1P53355 1430 aa13.18□□□□□ -0.3
TNFRSF19-201ENST00000248484 NUP155O75694 1391 aa13.18□□□□□ -0.3
TNFRSF19-201ENST00000248484 HFM1A2PYH4 1435 aa13.17□□□□□ -0.3
TNFRSF19-201ENST00000248484 PPP1R15AO75807 674 aaPredicted RBP13.17□□□□□ -0.3
TNFRSF19-201ENST00000248484 ERICH6Q7L0X2 663 aa13.16□□□□□ -0.3
TNFRSF19-201ENST00000248484 EFCAB2Q5VUJ9 269 aa13.16□□□□□ -0.3
TNFRSF19-201ENST00000248484 MAPKBP1O60336 1514 aa13.15□□□□□ -0.3
TNFRSF19-201ENST00000248484 CAMSAP2Q08AD1 1489 aa13.15□□□□□ -0.3
TNFRSF19-201ENST00000248484 ANKRD30AQ9BXX3 1397 aa13.14□□□□□ -0.31
TNFRSF19-201ENST00000248484 MIA2Q96PC5 1412 aa13.14□□□□□ -0.31
TNFRSF19-201ENST00000248484 SENP3-EIF4A1A0A087X0R7 540 aa13.12□□□□□ -0.31
TNFRSF19-201ENST00000248484 ARHGAP5Q13017 1502 aa13.12□□□□□ -0.31
TNFRSF19-201ENST00000248484 PLPPR3Q6T4P5 718 aa13.12□□□□□ -0.31
TNFRSF19-201ENST00000248484 KDM6BO15054 1643 aa13.11□□□□□ -0.31
TNFRSF19-201ENST00000248484 CHGAP10645 457 aaKnown RBP13.11□□□□□ -0.31
TNFRSF19-201ENST00000248484 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.11□□□□□ -0.31
TNFRSF19-201ENST00000248484 KIF15Q9NS87 1388 aa13.1□□□□□ -0.31
TNFRSF19-201ENST00000248484 GGT6Q6P531 493 aa13.08□□□□□ -0.31
TNFRSF19-201ENST00000248484 DCAF11Q8TEB1 546 aa13.08□□□□□ -0.31
TNFRSF19-201ENST00000248484 ANKRD50Q9ULJ7 1429 aa13.08□□□□□ -0.32
TNFRSF19-201ENST00000248484 SPAG9O60271 1321 aaKnown RBP13.08□□□□□ -0.32
TNFRSF19-201ENST00000248484 C9orf84Q5VXU9 1444 aa13.08□□□□□ -0.32
TNFRSF19-201ENST00000248484 ABCA8O94911 1581 aa13.08□□□□□ -0.32
TNFRSF19-201ENST00000248484 KIF3BO15066 747 aa13.08□□□□□ -0.32
TNFRSF19-201ENST00000248484 NCOA1Q15788 1441 aa13.07□□□□□ -0.32
TNFRSF19-201ENST00000248484 RAPGEF3O95398 923 aa13.07□□□□□ -0.32
TNFRSF19-201ENST00000248484 FAM9BQ8IZU0 186 aa13.06□□□□□ -0.32
TNFRSF19-201ENST00000248484 HSPA5P11021 654 aaKnown RBP13.06□□□□□ -0.32
TNFRSF19-201ENST00000248484 MSH5O43196 834 aa13.05□□□□□ -0.32
TNFRSF19-201ENST00000248484 NBPF8Q3BBV2 869 aa13.05□□□□□ -0.32
TNFRSF19-201ENST00000248484 CCER2I3L3R5 266 aa13.04□□□□□ -0.32
TNFRSF19-201ENST00000248484 MLECQ14165 292 aa13.04□□□□□ -0.32
TNFRSF19-201ENST00000248484 AKNAQ7Z591 1439 aa13.03□□□□□ -0.32
TNFRSF19-201ENST00000248484 TCOF1Q13428 1488 aaKnown RBP13.03□□□□□ -0.32
TNFRSF19-201ENST00000248484 FAM69CQ0P6D2 419 aa13.02□□□□□ -0.32
TNFRSF19-201ENST00000248484 EIF4G2P78344 907 aaKnown RBP eCLIP13.01□□□□□ -0.33
TNFRSF19-201ENST00000248484 SCAPERQ9BY12 1400 aa13.01□□□□□ -0.33
TNFRSF19-201ENST00000248484 ABCC2Q92887 1545 aa13.01□□□□□ -0.33
TNFRSF19-201ENST00000248484 NUTM2DQ5VT03 806 aaPredicted RBP13□□□□□ -0.33
TNFRSF19-201ENST00000248484 B4GALNT3Q6L9W6 998 aa13□□□□□ -0.33
TNFRSF19-201ENST00000248484 SYCP2Q9BX26 1530 aa13□□□□□ -0.33
TNFRSF19-201ENST00000248484 ABCC10Q5T3U5 1492 aa13□□□□□ -0.33
TNFRSF19-201ENST00000248484 ASXL2Q76L83 1435 aa12.99□□□□□ -0.33
TNFRSF19-201ENST00000248484 TRAPPC8Q9Y2L5 1435 aa12.99□□□□□ -0.33
TNFRSF19-201ENST00000248484 CCDC184Q52MB2 194 aa12.99□□□□□ -0.33
TNFRSF19-201ENST00000248484 CARD11Q9BXL7 1154 aa12.97□□□□□ -0.33
TNFRSF19-201ENST00000248484 TTC37Q6PGP7 1564 aa12.97□□□□□ -0.33
TNFRSF19-201ENST00000248484 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.97□□□□□ -0.33
TNFRSF19-201ENST00000248484 ROCK1Q13464 1354 aa12.97□□□□□ -0.33
TNFRSF19-201ENST00000248484 PLEKHH2Q8IVE3 1493 aa12.97□□□□□ -0.33
TNFRSF19-201ENST00000248484 RSPH4AQ5TD94 716 aa12.96□□□□□ -0.33
TNFRSF19-201ENST00000248484 ANKRD30BQ9BXX2 1392 aa12.95□□□□□ -0.34
TNFRSF19-201ENST00000248484 MRS2Q9HD23 443 aa12.95□□□□□ -0.34
TNFRSF19-201ENST00000248484 CLASP1Q7Z460 1538 aa12.95□□□□□ -0.34
TNFRSF19-201ENST00000248484 CCDC141Q6ZP82 1450 aa12.95□□□□□ -0.34
TNFRSF19-201ENST00000248484 C11orf95C9JLR9 678 aaPredicted RBP12.94□□□□□ -0.34
TNFRSF19-201ENST00000248484 TIMELESSQ9UNS1 1208 aa12.94□□□□□ -0.34
TNFRSF19-201ENST00000248484 TRHP20396 242 aaPredicted RBP12.94□□□□□ -0.34
TNFRSF19-201ENST00000248484 NBR1Q14596 966 aa12.94□□□□□ -0.34
TNFRSF19-201ENST00000248484 DNMT1P26358 1616 aaKnown RBP12.94□□□□□ -0.34
TNFRSF19-201ENST00000248484 DENND4BO75064 1496 aaPredicted RBP12.93□□□□□ -0.34
TNFRSF19-201ENST00000248484 PLCH2O75038 1416 aa12.93□□□□□ -0.34
TNFRSF19-201ENST00000248484 MBD5Q9P267 1494 aa12.92□□□□□ -0.34
TNFRSF19-201ENST00000248484 ARHGEF12Q9NZN5 1544 aa12.92□□□□□ -0.34
TNFRSF19-201ENST00000248484 CDC42BPAQ5VT25 1732 aa12.92□□□□□ -0.34
TNFRSF19-201ENST00000248484 NBPF1Q3BBV0 1214 aa12.91□□□□□ -0.34
TNFRSF19-201ENST00000248484 WASHC2AQ641Q2 1341 aa12.91□□□□□ -0.34
TNFRSF19-201ENST00000248484 FANCAO15360 1455 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms