RNA–Protein interactions for RNA: ENST00000247005.7

GDF1-201, Transcript of growth differentiation factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDF1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1-201ENST00000247005 AKNAQ7Z591 1439 aa34.21■■■■□ 3.07
GDF1-201ENST00000247005 ABCC5O15440 1437 aa34.19■■■■□ 3.06
GDF1-201ENST00000247005 MPHOSPH9Q99550 1183 aa34.19■■■■□ 3.06
GDF1-201ENST00000247005 CARMIL2Q6F5E8 1435 aa34.17■■■■□ 3.06
GDF1-201ENST00000247005 TROQ12816 1431 aaPredicted RBP34.16■■■■□ 3.06
GDF1-201ENST00000247005 ZNF777Q9ULD5 760 aaPredicted RBP34.14■■■■□ 3.06
GDF1-201ENST00000247005 CFDP1Q9UEE9 299 aaPredicted RBP34.13■■■■□ 3.05
GDF1-201ENST00000247005 KDM5BQ9UGL1 1544 aa34.12■■■■□ 3.05
GDF1-201ENST00000247005 DNMT1P26358 1616 aaKnown RBP34.1■■■■□ 3.05
GDF1-201ENST00000247005 KIF14Q15058 1648 aa34.08■■■■□ 3.05
GDF1-201ENST00000247005 ROCK1Q13464 1354 aa34.07■■■■□ 3.04
GDF1-201ENST00000247005 GPATCH8Q9UKJ3 1502 aaKnown RBP34.04■■■■□ 3.04
GDF1-201ENST00000247005 CAMSAP2Q08AD1 1489 aa34.03■■■■□ 3.04
GDF1-201ENST00000247005 PLEKHD1A6NEE1 506 aa33.97■■■■□ 3.03
GDF1-201ENST00000247005 L3MBTL2Q969R5 705 aa33.97■■■■□ 3.03
GDF1-201ENST00000247005 SLC4A1APQ9BWU0 796 aaKnown RBP33.96■■■■□ 3.03
GDF1-201ENST00000247005 ATP10BO94823 1461 aa33.94■■■■□ 3.02
GDF1-201ENST00000247005 ABCA8O94911 1581 aa33.93■■■■□ 3.02
GDF1-201ENST00000247005 MYT1Q01538 1121 aa33.91■■■■□ 3.02
GDF1-201ENST00000247005 ANKRD30BQ9BXX2 1392 aa33.9■■■■□ 3.02
GDF1-201ENST00000247005 ADCY10Q96PN6 1610 aa33.9■■■■□ 3.02
GDF1-201ENST00000247005 ITSN2Q9NZM3 1697 aa33.9■■■■□ 3.02
GDF1-201ENST00000247005 NCOA1Q15788 1441 aa33.89■■■■□ 3.02
GDF1-201ENST00000247005 HSPA5P11021 654 aaKnown RBP33.88■■■■□ 3.01
GDF1-201ENST00000247005 ANP32CO43423 234 aa33.88■■■■□ 3.01
GDF1-201ENST00000247005 PTPRGP23470 1445 aa33.84■■■■□ 3.01
GDF1-201ENST00000247005 ABCC10Q5T3U5 1492 aa33.79■■■■□ 3
GDF1-201ENST00000247005 RPRD2Q5VT52 1461 aaKnown RBP33.78■■■■□ 3
GDF1-201ENST00000247005 NBPF8Q3BBV2 869 aa33.78■■■■□ 3
GDF1-201ENST00000247005 PZPP20742 1482 aa33.78■■■■□ 3
GDF1-201ENST00000247005 CDC42BPAQ5VT25 1732 aa33.77■■■■□ 3
GDF1-201ENST00000247005 WASHC2AQ641Q2 1341 aa33.76■■■□□ 2.99
GDF1-201ENST00000247005 EIF4G2P78344 907 aaKnown RBP eCLIP33.76■■■□□ 2.99
GDF1-201ENST00000247005 ANKRD30AQ9BXX3 1397 aa33.75■■■□□ 2.99
GDF1-201ENST00000247005 ADGBQ8N7X0 1667 aa33.74■■■□□ 2.99
GDF1-201ENST00000247005 CHD1O14646 1710 aa33.73■■■□□ 2.99
GDF1-201ENST00000247005 ADGRL2O95490 1459 aa33.72■■■□□ 2.99
GDF1-201ENST00000247005 CCER2I3L3R5 266 aa33.72■■■□□ 2.99
GDF1-201ENST00000247005 HNRNPMP52272 730 aaKnown RBP eCLIP33.72■■■□□ 2.99
GDF1-201ENST00000247005 CROCC2H7BZ55 1655 aa33.72■■■□□ 2.99
GDF1-201ENST00000247005 TEX14Q8IWB6 1497 aa33.7■■■□□ 2.98
GDF1-201ENST00000247005 PKD2Q13563 968 aa33.69■■■□□ 2.98
GDF1-201ENST00000247005 ANKRD50Q9ULJ7 1429 aa33.68■■■□□ 2.98
GDF1-201ENST00000247005 SUPT16HQ9Y5B9 1047 aaKnown RBP33.68■■■□□ 2.98
GDF1-201ENST00000247005 C11orf95C9JLR9 678 aaPredicted RBP33.66■■■□□ 2.98
GDF1-201ENST00000247005 C9orf84Q5VXU9 1444 aa33.65■■■□□ 2.98
GDF1-201ENST00000247005 TSPY4P0CV99 314 aa33.63■■■□□ 2.97
GDF1-201ENST00000247005 TSPY10P0CW01 314 aa33.63■■■□□ 2.97
GDF1-201ENST00000247005 KIAA1107Q9UPP5 1409 aa33.6■■■□□ 2.97
GDF1-201ENST00000247005 ERCC6L2Q5T890 1561 aa33.58■■■□□ 2.97
GDF1-201ENST00000247005 NUP155O75694 1391 aa33.58■■■□□ 2.97
GDF1-201ENST00000247005 ZNF326Q5BKZ1 582 aaKnown RBP33.55■■■□□ 2.96
GDF1-201ENST00000247005 SHANK2Q9UPX8 1470 aa33.53■■■□□ 2.96
GDF1-201ENST00000247005 MBD5Q9P267 1494 aa33.52■■■□□ 2.96
GDF1-201ENST00000247005 KIF15Q9NS87 1388 aa33.51■■■□□ 2.96
GDF1-201ENST00000247005 CCDC7Q96M83 1385 aa33.48■■■□□ 2.95
GDF1-201ENST00000247005 SHROOM2Q13796 1616 aa33.48■■■□□ 2.95
GDF1-201ENST00000247005 CDC42BPBQ9Y5S2 1711 aa33.48■■■□□ 2.95
GDF1-201ENST00000247005 SAMD9LQ8IVG5 1584 aa33.47■■■□□ 2.95
GDF1-201ENST00000247005 SPATA31E1Q6ZUB1 1445 aa33.44■■■□□ 2.94
GDF1-201ENST00000247005 CNTLNQ9NXG0 1405 aa33.43■■■□□ 2.94
GDF1-201ENST00000247005 ARHGEF5Q12774 1597 aa33.41■■■□□ 2.94
GDF1-201ENST00000247005 PREX2Q70Z35 1606 aa33.41■■■□□ 2.94
GDF1-201ENST00000247005 TTC37Q6PGP7 1564 aa33.41■■■□□ 2.94
GDF1-201ENST00000247005 CCDC141Q6ZP82 1450 aa33.4■■■□□ 2.94
GDF1-201ENST00000247005 KIF7Q2M1P5 1343 aa33.4■■■□□ 2.94
GDF1-201ENST00000247005 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.37■■■□□ 2.93
GDF1-201ENST00000247005 CCDC184Q52MB2 194 aa33.37■■■□□ 2.93
GDF1-201ENST00000247005 ARHGAP5Q13017 1502 aa33.36■■■□□ 2.93
GDF1-201ENST00000247005 SYCP2Q9BX26 1530 aa33.36■■■□□ 2.93
GDF1-201ENST00000247005 ABCC2Q92887 1545 aa33.35■■■□□ 2.93
GDF1-201ENST00000247005 BCANQ96GW7 911 aa33.33■■■□□ 2.93
GDF1-201ENST00000247005 KDM2AQ9Y2K7 1162 aa33.33■■■□□ 2.93
GDF1-201ENST00000247005 FKBP8Q14318 412 aa33.32■■■□□ 2.92
GDF1-201ENST00000247005 HNRNPUQ00839 825 aaKnown RBP eCLIP33.3■■■□□ 2.92
GDF1-201ENST00000247005 RSPH4AQ5TD94 716 aa33.3■■■□□ 2.92
GDF1-201ENST00000247005 KDM5DQ9BY66 1539 aa33.29■■■□□ 2.92
GDF1-201ENST00000247005 POLR3GLQ9BT43 218 aa33.29■■■□□ 2.92
GDF1-201ENST00000247005 PRKRIP1Q9H875 184 aaPredicted RBP33.29■■■□□ 2.92
GDF1-201ENST00000247005 USP47Q96K76 1375 aa33.29■■■□□ 2.92
GDF1-201ENST00000247005 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.28■■■□□ 2.92
GDF1-201ENST00000247005 CNGB1Q14028 1251 aaPredicted RBP33.24■■■□□ 2.91
GDF1-201ENST00000247005 DCAF11Q8TEB1 546 aa33.24■■■□□ 2.91
GDF1-201ENST00000247005 FAM135AQ9P2D6 1515 aa33.22■■■□□ 2.91
GDF1-201ENST00000247005 CLASP1Q7Z460 1538 aa33.2■■■□□ 2.9
GDF1-201ENST00000247005 ARHGEF12Q9NZN5 1544 aa33.19■■■□□ 2.9
GDF1-201ENST00000247005 CARD11Q9BXL7 1154 aa33.18■■■□□ 2.9
GDF1-201ENST00000247005 BCORL1Q5H9F3 1711 aa33.18■■■□□ 2.9
GDF1-201ENST00000247005 MYO5CQ9NQX4 1742 aa33.18■■■□□ 2.9
GDF1-201ENST00000247005 UHRF1BP1Q6BDS2 1440 aa33.17■■■□□ 2.9
GDF1-201ENST00000247005 ZCCHC11Q5TAX3 1644 aaKnown RBP33.16■■■□□ 2.9
GDF1-201ENST00000247005 FAM9BQ8IZU0 186 aa33.16■■■□□ 2.9
GDF1-201ENST00000247005 MRS2Q9HD23 443 aa33.15■■■□□ 2.9
GDF1-201ENST00000247005 PLEKHH2Q8IVE3 1493 aa33.14■■■□□ 2.9
GDF1-201ENST00000247005 POLR1AO95602 1720 aaPredicted RBP33.13■■■□□ 2.89
GDF1-201ENST00000247005 KDM5CP41229 1560 aa33.13■■■□□ 2.89
GDF1-201ENST00000247005 RGL3Q3MIN7 710 aa33.12■■■□□ 2.89
GDF1-201ENST00000247005 RALGAPBQ86X10 1494 aa33.11■■■□□ 2.89
GDF1-201ENST00000247005 PLCH2O75038 1416 aa33.11■■■□□ 2.89
GDF1-201ENST00000247005 MAST1Q9Y2H9 1570 aa33.1■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms