RNA–Protein interactions for RNA: ENST00000245441.9

NIN-201, Transcript of ninein, humanhuman

APPRIS P5 TSL 5 BASIC

Gene NIN, Length 10,293 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-201ENST00000245441 ARID4BQ4LE39 1312 aaPredicted RBP14.61□□□□□ -0.07
NIN-201ENST00000245441 PTMSP20962 102 aa14.6□□□□□ -0.07
NIN-201ENST00000245441 DEKP35659 375 aaKnown RBP14.6□□□□□ -0.07
NIN-201ENST00000245441 FMN1Q68DA7 1419 aa14.59□□□□□ -0.07
NIN-201ENST00000245441 WIZO95785 1651 aa14.59□□□□□ -0.07
NIN-201ENST00000245441 IPO8O15397 1037 aaKnown RBP14.57□□□□□ -0.08
NIN-201ENST00000245441 CECR2Q9BXF3 1484 aa14.56□□□□□ -0.08
NIN-201ENST00000245441 RALBP1Q15311 655 aa14.56□□□□□ -0.08
NIN-201ENST00000245441 ROCK2O75116 1388 aaKnown RBP14.56□□□□□ -0.08
NIN-201ENST00000245441 MORC1Q86VD1 984 aa14.55□□□□□ -0.08
NIN-201ENST00000245441 GBP4Q96PP9 640 aa14.55□□□□□ -0.08
NIN-201ENST00000245441 RAB3GAP2Q9H2M9 1393 aa14.55□□□□□ -0.08
NIN-201ENST00000245441 RCAN3Q9UKA8 241 aa14.55□□□□□ -0.08
NIN-201ENST00000245441 EIF3AQ14152 1382 aaKnown RBP14.54□□□□□ -0.08
NIN-201ENST00000245441 TCERG1O14776 1098 aaKnown RBP14.54□□□□□ -0.08
NIN-201ENST00000245441 HSPA5P11021 654 aaKnown RBP14.53□□□□□ -0.08
NIN-201ENST00000245441 CALD1Q05682 793 aaKnown RBP14.53□□□□□ -0.08
NIN-201ENST00000245441 CCDC88BA6NC98 1476 aa14.53□□□□□ -0.08
NIN-201ENST00000245441 NAP1L2Q9ULW6 460 aaPredicted RBP14.52□□□□□ -0.08
NIN-201ENST00000245441 GOLGA2Q08379 1002 aa14.52□□□□□ -0.08
NIN-201ENST00000245441 SRPK2P78362 688 aaKnown RBP14.52□□□□□ -0.09
NIN-201ENST00000245441 TOP2AP11388 1531 aaKnown RBP14.51□□□□□ -0.09
NIN-201ENST00000245441 HDGFP51858 240 aaKnown RBP14.5□□□□□ -0.09
NIN-201ENST00000245441 DRC7Q8IY82 874 aa14.5□□□□□ -0.09
NIN-201ENST00000245441 MROH2BQ7Z745 1585 aa14.5□□□□□ -0.09
NIN-201ENST00000245441 KIAA1211Q6ZU35 1233 aa14.5□□□□□ -0.09
NIN-201ENST00000245441 LMOD2Q6P5Q4 547 aa14.49□□□□□ -0.09
NIN-201ENST00000245441 RWDD1Q9H446 243 aaPredicted RBP14.49□□□□□ -0.09
NIN-201ENST00000245441 SYAP1Q96A49 352 aaPredicted RBP14.48□□□□□ -0.09
NIN-201ENST00000245441 NPHP1O15259 732 aa14.48□□□□□ -0.09
NIN-201ENST00000245441 CARMIL2Q6F5E8 1435 aa14.48□□□□□ -0.09
NIN-201ENST00000245441 PKD2Q13563 968 aa14.48□□□□□ -0.09
NIN-201ENST00000245441 PHLDB1Q86UU1 1377 aa14.47□□□□□ -0.09
NIN-201ENST00000245441 RTF1Q92541 710 aaKnown RBP14.47□□□□□ -0.09
NIN-201ENST00000245441 KIAA2012Q0VF49 1180 aa14.47□□□□□ -0.09
NIN-201ENST00000245441 SPRYD3Q8NCJ5 442 aa14.47□□□□□ -0.09
NIN-201ENST00000245441 TAOK2Q9UL54 1235 aa14.45□□□□□ -0.1
NIN-201ENST00000245441 ANKRD30AQ9BXX3 1397 aa14.45□□□□□ -0.1
NIN-201ENST00000245441 CCDC18Q5T9S5 1454 aa14.45□□□□□ -0.1
NIN-201ENST00000245441 PMFBP1Q8TBY8 1022 aa14.44□□□□□ -0.1
NIN-201ENST00000245441 GNL2Q13823 731 aaKnown RBP14.44□□□□□ -0.1
NIN-201ENST00000245441 HDGFL2Q7Z4V5 671 aaPredicted RBP14.44□□□□□ -0.1
NIN-201ENST00000245441 NUP155O75694 1391 aa14.44□□□□□ -0.1
NIN-201ENST00000245441 IPO9Q96P70 1041 aaKnown RBP14.44□□□□□ -0.1
NIN-201ENST00000245441 CHMP4AQ9BY43 222 aa14.43□□□□□ -0.1
NIN-201ENST00000245441 ITPRIPQ8IWB1 547 aa14.43□□□□□ -0.1
NIN-201ENST00000245441 MPHOSPH9Q99550 1183 aa14.43□□□□□ -0.1
NIN-201ENST00000245441 TULP1O00294 542 aaPredicted RBP14.42□□□□□ -0.1
NIN-201ENST00000245441 HTATSF1O43719 755 aaKnown RBP14.42□□□□□ -0.1
NIN-201ENST00000245441 SLKQ9H2G2 1235 aaPredicted RBP14.42□□□□□ -0.1
NIN-201ENST00000245441 KANK4Q5T7N3 995 aaPredicted RBP14.41□□□□□ -0.1
NIN-201ENST00000245441 PDE3BQ13370 1112 aa14.41□□□□□ -0.1
NIN-201ENST00000245441 U2AF1L5P0DN76 240 aaPredicted RBP14.41□□□□□ -0.1
NIN-201ENST00000245441 U2AF1Q01081 240 aaKnown RBP eCLIP14.41□□□□□ -0.1
NIN-201ENST00000245441 FOXD1Q16676 465 aa14.41□□□□□ -0.1
NIN-201ENST00000245441 NLRP13Q86W25 1043 aa14.4□□□□□ -0.1
NIN-201ENST00000245441 GZF1Q9H116 711 aaPredicted RBP14.39□□□□□ -0.11
NIN-201ENST00000245441 SPAG9O60271 1321 aaKnown RBP14.38□□□□□ -0.11
NIN-201ENST00000245441 GPATCH3Q96I76 525 aa14.38□□□□□ -0.11
NIN-201ENST00000245441 KIF15Q9NS87 1388 aa14.38□□□□□ -0.11
NIN-201ENST00000245441 SAFB2Q14151 953 aaKnown RBP eCLIP14.38□□□□□ -0.11
NIN-201ENST00000245441 GOLGA6L3A6NEY3 463 aa14.37□□□□□ -0.11
NIN-201ENST00000245441 USP35Q9P2H5 1018 aa14.37□□□□□ -0.11
NIN-201ENST00000245441 PHF14O94880 888 aa14.37□□□□□ -0.11
NIN-201ENST00000245441 SMARCA4P51532 1647 aa14.36□□□□□ -0.11
NIN-201ENST00000245441 KAT6BQ8WYB5 2073 aa14.36□□□□□ -0.11
NIN-201ENST00000245441 HMMRO75330 724 aa14.36□□□□□ -0.11
NIN-201ENST00000245441 SOX12O15370 315 aa14.36□□□□□ -0.11
NIN-201ENST00000245441 APBB1O00213 710 aa14.36□□□□□ -0.11
NIN-201ENST00000245441 TSHZ2Q9NRE2 1034 aa14.36□□□□□ -0.11
NIN-201ENST00000245441 HDAC5Q9UQL6 1122 aa14.36□□□□□ -0.11
NIN-201ENST00000245441 PDS5BQ9NTI5 1447 aa14.36□□□□□ -0.11
NIN-201ENST00000245441 CSPP1Q1MSJ5 1256 aa14.35□□□□□ -0.11
NIN-201ENST00000245441 SMC4Q9NTJ3 1288 aa14.35□□□□□ -0.11
NIN-201ENST00000245441 PRDM2Q13029 1718 aa14.35□□□□□ -0.11
NIN-201ENST00000245441 RAPGEF2Q9Y4G8 1499 aa14.35□□□□□ -0.11
NIN-201ENST00000245441 CCDC34Q96HJ3 373 aa14.35□□□□□ -0.11
NIN-201ENST00000245441 CENPJQ9HC77 1338 aaPredicted RBP14.34□□□□□ -0.11
NIN-201ENST00000245441 TERF2IPQ9NYB0 399 aa14.33□□□□□ -0.11
NIN-201ENST00000245441 STK31Q9BXU1 1019 aa14.33□□□□□ -0.12
NIN-201ENST00000245441 MFAP1P55081 439 aaKnown RBP14.32□□□□□ -0.12
NIN-201ENST00000245441 TPM4P67936 248 aa14.32□□□□□ -0.12
NIN-201ENST00000245441 STK26Q9P289 416 aa14.32□□□□□ -0.12
NIN-201ENST00000245441 ST18O60284 1047 aa14.31□□□□□ -0.12
NIN-201ENST00000245441 DDX11L8A8MPP1 907 aa14.31□□□□□ -0.12
NIN-201ENST00000245441 LMOD3Q0VAK6 560 aa14.3□□□□□ -0.12
NIN-201ENST00000245441 ZBED9Q6R2W3 1325 aa14.3□□□□□ -0.12
NIN-201ENST00000245441 L3MBTL2Q969R5 705 aa14.3□□□□□ -0.12
NIN-201ENST00000245441 RSPH4AQ5TD94 716 aa14.3□□□□□ -0.12
NIN-201ENST00000245441 MYBBP1AQ9BQG0 1328 aaKnown RBP14.3□□□□□ -0.12
NIN-201ENST00000245441 TRIM6-TRIM34B2RNG4 842 aa14.29□□□□□ -0.12
NIN-201ENST00000245441 GGT6Q6P531 493 aa14.29□□□□□ -0.12
NIN-201ENST00000245441 CCDC144AA2RUR9 1427 aa14.28□□□□□ -0.12
NIN-201ENST00000245441 EFCAB2Q5VUJ9 269 aa14.28□□□□□ -0.12
NIN-201ENST00000245441 CENPQQ7L2Z9 268 aaPredicted RBP14.28□□□□□ -0.12
NIN-201ENST00000245441 UACAQ9BZF9 1416 aa14.28□□□□□ -0.12
NIN-201ENST00000245441 FHOD3Q2V2M9 1422 aa14.28□□□□□ -0.12
NIN-201ENST00000245441 KIF3AQ9Y496 699 aa14.26□□□□□ -0.13
NIN-201ENST00000245441 NOC3LQ8WTT2 800 aaKnown RBP14.26□□□□□ -0.13
NIN-201ENST00000245441 CLSTN1O94985 981 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms