RNA–Protein interactions for RNA: ENST00000244815.9

LRRFIP1-201, Transcript of LRR binding FLII interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRRFIP1, Length 4,370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-201ENST00000244815 PTMAP06454 111 aaKnown RBP20.49■□□□□ 0.87
LRRFIP1-201ENST00000244815 HSP90AB1P08238 724 aaKnown RBP20.49■□□□□ 0.87
LRRFIP1-201ENST00000244815 ROCK2O75116 1388 aaKnown RBP20.49■□□□□ 0.87
LRRFIP1-201ENST00000244815 NLRP13Q86W25 1043 aa20.48■□□□□ 0.87
LRRFIP1-201ENST00000244815 PRKRIP1Q9H875 184 aaPredicted RBP20.48■□□□□ 0.87
LRRFIP1-201ENST00000244815 CHMP4BQ9H444 224 aaKnown RBP20.47■□□□□ 0.87
LRRFIP1-201ENST00000244815 ZBTB7CA1YPR0 619 aa20.47■□□□□ 0.87
LRRFIP1-201ENST00000244815 SPRYD3Q8NCJ5 442 aa20.45■□□□□ 0.86
LRRFIP1-201ENST00000244815 ANKRD30AQ9BXX3 1397 aa20.44■□□□□ 0.86
LRRFIP1-201ENST00000244815 TPRNQ4KMQ1 711 aa20.44■□□□□ 0.86
LRRFIP1-201ENST00000244815 HSCBQ8IWL3 235 aa20.43■□□□□ 0.86
LRRFIP1-201ENST00000244815 PDE3BQ13370 1112 aa20.41■□□□□ 0.86
LRRFIP1-201ENST00000244815 DNTTIP2Q5QJE6 756 aaKnown RBP20.41■□□□□ 0.86
LRRFIP1-201ENST00000244815 SAFB2Q14151 953 aaKnown RBP eCLIP20.4■□□□□ 0.86
LRRFIP1-201ENST00000244815 SLKQ9H2G2 1235 aaPredicted RBP20.4■□□□□ 0.86
LRRFIP1-201ENST00000244815 PNNQ9H307 717 aaKnown RBP20.4■□□□□ 0.86
LRRFIP1-201ENST00000244815 SRPK2P78362 688 aaKnown RBP20.39■□□□□ 0.86
LRRFIP1-201ENST00000244815 ATAD2BQ9ULI0 1458 aa20.39■□□□□ 0.86
LRRFIP1-201ENST00000244815 CADPSQ9ULU8 1353 aa20.39■□□□□ 0.85
LRRFIP1-201ENST00000244815 ST20-MTHFSA0A0A6YYL1 179 aa20.39■□□□□ 0.85
LRRFIP1-201ENST00000244815 KANK1Q14678 1352 aa20.38■□□□□ 0.85
LRRFIP1-201ENST00000244815 GOLGA2Q08379 1002 aa20.38■□□□□ 0.85
LRRFIP1-201ENST00000244815 L1TD1Q5T7N2 865 aaKnown RBP20.37■□□□□ 0.85
LRRFIP1-201ENST00000244815 ERCC6Q03468 1493 aa20.36■□□□□ 0.85
LRRFIP1-201ENST00000244815 ZBED9Q6R2W3 1325 aa20.36■□□□□ 0.85
LRRFIP1-201ENST00000244815 U2AF1L5P0DN76 240 aaPredicted RBP20.36■□□□□ 0.85
LRRFIP1-201ENST00000244815 U2AF1Q01081 240 aaKnown RBP eCLIP20.36■□□□□ 0.85
LRRFIP1-201ENST00000244815 CARMIL2Q6F5E8 1435 aa20.34■□□□□ 0.85
LRRFIP1-201ENST00000244815 HNRNPMP52272 730 aaKnown RBP eCLIP20.33■□□□□ 0.855e-6■■■■□ 20.7
LRRFIP1-201ENST00000244815 SMARCA4P51532 1647 aa20.33■□□□□ 0.85
LRRFIP1-201ENST00000244815 PLCB2Q00722 1185 aa20.33■□□□□ 0.84
LRRFIP1-201ENST00000244815 RWDD1Q9H446 243 aaPredicted RBP20.33■□□□□ 0.84
LRRFIP1-201ENST00000244815 GGT6Q6P531 493 aa20.32■□□□□ 0.84
LRRFIP1-201ENST00000244815 PDS5BQ9NTI5 1447 aa20.31■□□□□ 0.84
LRRFIP1-201ENST00000244815 MYBBP1AQ9BQG0 1328 aaKnown RBP20.3■□□□□ 0.84
LRRFIP1-201ENST00000244815 IPO8O15397 1037 aaKnown RBP20.3■□□□□ 0.84
LRRFIP1-201ENST00000244815 CCDC146Q8IYE0 955 aa20.3■□□□□ 0.84
LRRFIP1-201ENST00000244815 GZF1Q9H116 711 aaPredicted RBP20.29■□□□□ 0.84
LRRFIP1-201ENST00000244815 KIF15Q9NS87 1388 aa20.29■□□□□ 0.84
LRRFIP1-201ENST00000244815 CCDC18Q5T9S5 1454 aa20.29■□□□□ 0.84
LRRFIP1-201ENST00000244815 EFCAB2Q5VUJ9 269 aa20.29■□□□□ 0.84
LRRFIP1-201ENST00000244815 CLUAP1Q96AJ1 413 aa20.29■□□□□ 0.84
LRRFIP1-201ENST00000244815 FANCIQ9NVI1 1328 aa20.29■□□□□ 0.84
LRRFIP1-201ENST00000244815 STK26Q9P289 416 aa20.29■□□□□ 0.84
LRRFIP1-201ENST00000244815 EXOC6Q8TAG9 804 aa20.28■□□□□ 0.84
LRRFIP1-201ENST00000244815 PDE4AP27815 886 aa20.28■□□□□ 0.84
LRRFIP1-201ENST00000244815 ARID4BQ4LE39 1312 aaPredicted RBP20.27■□□□□ 0.83
LRRFIP1-201ENST00000244815 PLIN1O60240 522 aa20.27■□□□□ 0.83
LRRFIP1-201ENST00000244815 ZRSR1Q15695 479 aaKnown RBP20.26■□□□□ 0.83
LRRFIP1-201ENST00000244815 ITPRIPQ8IWB1 547 aa20.26■□□□□ 0.83
LRRFIP1-201ENST00000244815 PANK3Q9H999 370 aa20.25■□□□□ 0.83
LRRFIP1-201ENST00000244815 SOX12O15370 315 aa20.25■□□□□ 0.83
LRRFIP1-201ENST00000244815 PMFBP1Q8TBY8 1022 aa20.24■□□□□ 0.83
LRRFIP1-201ENST00000244815 IGF1RP08069 1367 aa20.24■□□□□ 0.83
LRRFIP1-201ENST00000244815 RRP1P56182 461 aaKnown RBP20.24■□□□□ 0.83
LRRFIP1-201ENST00000244815 PHLDB1Q86UU1 1377 aa20.23■□□□□ 0.83
LRRFIP1-201ENST00000244815 APBB1O00213 710 aa20.23■□□□□ 0.83
LRRFIP1-201ENST00000244815 OS9Q13438 667 aaPredicted RBP20.23■□□□□ 0.83
LRRFIP1-201ENST00000244815 USP47Q96K76 1375 aa20.23■□□□□ 0.83
LRRFIP1-201ENST00000244815 A0A0G2JS52 829 aa20.23■□□□□ 0.83
LRRFIP1-201ENST00000244815 CENPJQ9HC77 1338 aaPredicted RBP20.22■□□□□ 0.83
LRRFIP1-201ENST00000244815 HAP1P54257 671 aaPredicted RBP20.22■□□□□ 0.83
LRRFIP1-201ENST00000244815 RSPH4AQ5TD94 716 aa20.22■□□□□ 0.83
LRRFIP1-201ENST00000244815 KCNJ4P48050 445 aa20.21■□□□□ 0.83
LRRFIP1-201ENST00000244815 KIF21BO75037 1637 aa20.2■□□□□ 0.82
LRRFIP1-201ENST00000244815 KIF3BO15066 747 aa20.2■□□□□ 0.82
LRRFIP1-201ENST00000244815 MFAP1P55081 439 aaKnown RBP20.2■□□□□ 0.82
LRRFIP1-201ENST00000244815 SMC4Q9NTJ3 1288 aa20.2■□□□□ 0.82
LRRFIP1-201ENST00000244815 GBP4Q96PP9 640 aa20.2■□□□□ 0.82
LRRFIP1-201ENST00000244815 USP35Q9P2H5 1018 aa20.2■□□□□ 0.82
LRRFIP1-201ENST00000244815 MSNP26038 577 aaKnown RBP20.19■□□□□ 0.82
LRRFIP1-201ENST00000244815 HDGFL2Q7Z4V5 671 aaPredicted RBP20.19■□□□□ 0.82
LRRFIP1-201ENST00000244815 SLC4A3P48751 1232 aa20.19■□□□□ 0.82
LRRFIP1-201ENST00000244815 LMOD2Q6P5Q4 547 aa20.18■□□□□ 0.82
LRRFIP1-201ENST00000244815 JPH4Q96JJ6 628 aa20.18■□□□□ 0.82
LRRFIP1-201ENST00000244815 CFAP44Q96MT7 982 aa20.18■□□□□ 0.82
LRRFIP1-201ENST00000244815 FGD1P98174 961 aa20.17■□□□□ 0.82
LRRFIP1-201ENST00000244815 CENPQQ7L2Z9 268 aaPredicted RBP20.17■□□□□ 0.82
LRRFIP1-201ENST00000244815 CRBNQ96SW2 442 aa20.17■□□□□ 0.82
LRRFIP1-201ENST00000244815 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.16■□□□□ 0.82
LRRFIP1-201ENST00000244815 MCCP23508 829 aa20.15■□□□□ 0.82
LRRFIP1-201ENST00000244815 KIF7Q2M1P5 1343 aa20.15■□□□□ 0.82
LRRFIP1-201ENST00000244815 CCDC7Q96M83 1385 aa20.15■□□□□ 0.82
LRRFIP1-201ENST00000244815 FAM161AQ3B820 660 aa20.15■□□□□ 0.82
LRRFIP1-201ENST00000244815 EIF3AQ14152 1382 aaKnown RBP20.15■□□□□ 0.82
LRRFIP1-201ENST00000244815 FGD6Q6ZV73 1430 aa20.14■□□□□ 0.81
LRRFIP1-201ENST00000244815 CCDC144AA2RUR9 1427 aa20.13■□□□□ 0.81
LRRFIP1-201ENST00000244815 CALD1Q05682 793 aaKnown RBP20.13■□□□□ 0.81
LRRFIP1-201ENST00000244815 MLECQ14165 292 aa20.13■□□□□ 0.81
LRRFIP1-201ENST00000244815 RRP7AQ9Y3A4 280 aaKnown RBP20.13■□□□□ 0.81
LRRFIP1-201ENST00000244815 GOLGA6L4A6NEF3 574 aa20.13■□□□□ 0.81
LRRFIP1-201ENST00000244815 WASHC2AQ641Q2 1341 aa20.12■□□□□ 0.81
LRRFIP1-201ENST00000244815 UACAQ9BZF9 1416 aa20.12■□□□□ 0.81
LRRFIP1-201ENST00000244815 GOLGA6L3A6NEY3 463 aa20.12■□□□□ 0.81
LRRFIP1-201ENST00000244815 RTF1Q92541 710 aaKnown RBP20.11■□□□□ 0.81
LRRFIP1-201ENST00000244815 SPAG9O60271 1321 aaKnown RBP20.11■□□□□ 0.81
LRRFIP1-201ENST00000244815 BCL2L13Q9BXK5 485 aa20.11■□□□□ 0.81
LRRFIP1-201ENST00000244815 APAF1O14727 1248 aa20.09■□□□□ 0.81
LRRFIP1-201ENST00000244815 TRAK1Q9UPV9 953 aa20.09■□□□□ 0.81
LRRFIP1-201ENST00000244815 LRRC9Q6ZRR7 1453 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms