RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 RAD54L2Q9Y4B4 1467 aa12.11□□□□□ -0.47
COL21A1-201ENST00000244728 HSP90AA1P07900 732 aaKnown RBP12.11□□□□□ -0.47
COL21A1-201ENST00000244728 UPF2Q9HAU5 1272 aaKnown RBP12.11□□□□□ -0.47
COL21A1-201ENST00000244728 LRRC9Q6ZRR7 1453 aa12.1□□□□□ -0.47
COL21A1-201ENST00000244728 RGS3P49796 1198 aa12.1□□□□□ -0.47
COL21A1-201ENST00000244728 STK26Q9P289 416 aa12.1□□□□□ -0.47
COL21A1-201ENST00000244728 ERICH3Q5RHP9 1530 aa12.09□□□□□ -0.47
COL21A1-201ENST00000244728 PRXQ9BXM0 1461 aa12.09□□□□□ -0.47
COL21A1-201ENST00000244728 WASHC2AQ641Q2 1341 aa12.09□□□□□ -0.47
COL21A1-201ENST00000244728 SOX12O15370 315 aa12.09□□□□□ -0.47
COL21A1-201ENST00000244728 CDCA8Q53HL2 280 aa12.09□□□□□ -0.47
COL21A1-201ENST00000244728 CARMIL2Q6F5E8 1435 aa12.08□□□□□ -0.48
COL21A1-201ENST00000244728 RCAN3Q9UKA8 241 aa12.08□□□□□ -0.48
COL21A1-201ENST00000244728 TCERG1O14776 1098 aaKnown RBP12.08□□□□□ -0.48
COL21A1-201ENST00000244728 NUTM2DQ5VT03 806 aaPredicted RBP12.07□□□□□ -0.48
COL21A1-201ENST00000244728 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.07□□□□□ -0.48
COL21A1-201ENST00000244728 FRAT1Q92837 279 aaPredicted RBP12.07□□□□□ -0.48
COL21A1-201ENST00000244728 A0A0G2JS52 829 aa12.07□□□□□ -0.48
COL21A1-201ENST00000244728 U2SURPO15042 1029 aaKnown RBP12.07□□□□□ -0.48
COL21A1-201ENST00000244728 KIF3BO15066 747 aa12.07□□□□□ -0.48
COL21A1-201ENST00000244728 ZNF644Q9H582 1327 aaPredicted RBP12.07□□□□□ -0.48
COL21A1-201ENST00000244728 TMF1P82094 1093 aa12.07□□□□□ -0.48
COL21A1-201ENST00000244728 EFCAB2Q5VUJ9 269 aa12.07□□□□□ -0.48
COL21A1-201ENST00000244728 LMOD2Q6P5Q4 547 aa12.05□□□□□ -0.48
COL21A1-201ENST00000244728 CFAP53Q96M91 514 aa12.05□□□□□ -0.48
COL21A1-201ENST00000244728 FGD5Q6ZNL6 1462 aa12.05□□□□□ -0.48
COL21A1-201ENST00000244728 PAK3O75914 559 aaPredicted RBP12.05□□□□□ -0.48
COL21A1-201ENST00000244728 CCDC184Q52MB2 194 aa12.04□□□□□ -0.48
COL21A1-201ENST00000244728 UACAQ9BZF9 1416 aa12.04□□□□□ -0.48
COL21A1-201ENST00000244728 TRHP20396 242 aaPredicted RBP12.03□□□□□ -0.48
COL21A1-201ENST00000244728 DNAJC5BQ9UF47 199 aa12.03□□□□□ -0.48
COL21A1-201ENST00000244728 SRPK2P78362 688 aaKnown RBP12.03□□□□□ -0.48
COL21A1-201ENST00000244728 FGD6Q6ZV73 1430 aa12.03□□□□□ -0.48
COL21A1-201ENST00000244728 BECN1Q14457 450 aa12.02□□□□□ -0.49
COL21A1-201ENST00000244728 CNTLNQ9NXG0 1405 aa12.02□□□□□ -0.49
COL21A1-201ENST00000244728 CCDC7Q96M83 1385 aa12.02□□□□□ -0.49
COL21A1-201ENST00000244728 ANKRD30AQ9BXX3 1397 aa12.01□□□□□ -0.49
COL21A1-201ENST00000244728 EXOC6Q8TAG9 804 aa12.01□□□□□ -0.49
COL21A1-201ENST00000244728 PDE4AP27815 886 aa12.01□□□□□ -0.49
COL21A1-201ENST00000244728 TOP2BQ02880 1626 aa12□□□□□ -0.49
COL21A1-201ENST00000244728 GLIPR1L2Q4G1C9 344 aa12□□□□□ -0.49
COL21A1-201ENST00000244728 AQRO60306 1485 aaKnown RBP eCLIP12□□□□□ -0.49
COL21A1-201ENST00000244728 ST20-MTHFSA0A0A6YYL1 179 aa12□□□□□ -0.49
COL21A1-201ENST00000244728 KIF7Q2M1P5 1343 aa11.99□□□□□ -0.49
COL21A1-201ENST00000244728 ROCK2O75116 1388 aaKnown RBP11.99□□□□□ -0.49
COL21A1-201ENST00000244728 TIAM1Q13009 1591 aa11.98□□□□□ -0.49
COL21A1-201ENST00000244728 RALBP1Q15311 655 aa11.97□□□□□ -0.49
COL21A1-201ENST00000244728 MAPK8IP3Q9UPT6 1336 aa11.97□□□□□ -0.49
COL21A1-201ENST00000244728 KANK1Q14678 1352 aa11.97□□□□□ -0.49
COL21A1-201ENST00000244728 MORC1Q86VD1 984 aa11.97□□□□□ -0.49
COL21A1-201ENST00000244728 NCAPD3P42695 1498 aa11.97□□□□□ -0.49
COL21A1-201ENST00000244728 NESP48681 1621 aa11.97□□□□□ -0.49
COL21A1-201ENST00000244728 RRP1P56182 461 aaKnown RBP11.97□□□□□ -0.49
COL21A1-201ENST00000244728 SPAG9O60271 1321 aaKnown RBP11.97□□□□□ -0.49
COL21A1-201ENST00000244728 FTSJ3Q8IY81 847 aaKnown RBP11.97□□□□□ -0.49
COL21A1-201ENST00000244728 KTN1Q86UP2 1357 aaKnown RBP11.96□□□□□ -0.49
COL21A1-201ENST00000244728 SLC4A3P48751 1232 aa11.96□□□□□ -0.49
COL21A1-201ENST00000244728 GAPVD1Q14C86 1478 aa11.96□□□□□ -0.49
COL21A1-201ENST00000244728 PLIN1O60240 522 aa11.96□□□□□ -0.49
COL21A1-201ENST00000244728 USP35Q9P2H5 1018 aa11.96□□□□□ -0.5
COL21A1-201ENST00000244728 AKNAQ7Z591 1439 aa11.96□□□□□ -0.5
COL21A1-201ENST00000244728 MAPKBP1O60336 1514 aa11.94□□□□□ -0.5
COL21A1-201ENST00000244728 NLRP13Q86W25 1043 aa11.94□□□□□ -0.5
COL21A1-201ENST00000244728 ANP32BQ92688 251 aaKnown RBP11.94□□□□□ -0.5
COL21A1-201ENST00000244728 MYH16Q9H6N6 1097 aa11.94□□□□□ -0.5
COL21A1-201ENST00000244728 CYB5RLQ6IPT4 315 aa11.93□□□□□ -0.5
COL21A1-201ENST00000244728 PTPRGP23470 1445 aa11.93□□□□□ -0.5
COL21A1-201ENST00000244728 MYOM3Q5VTT5 1437 aa11.93□□□□□ -0.5
COL21A1-201ENST00000244728 USP47Q96K76 1375 aa11.93□□□□□ -0.5
COL21A1-201ENST00000244728 NUTM2FA1L443 756 aa11.93□□□□□ -0.5
COL21A1-201ENST00000244728 TRAK1Q9UPV9 953 aa11.93□□□□□ -0.5
COL21A1-201ENST00000244728 CUX1P39880 1505 aa11.92□□□□□ -0.5
COL21A1-201ENST00000244728 PDE3BQ13370 1112 aa11.92□□□□□ -0.5
COL21A1-201ENST00000244728 MYBBP1AQ9BQG0 1328 aaKnown RBP11.92□□□□□ -0.5
COL21A1-201ENST00000244728 IL27Q8NEV9 243 aa11.92□□□□□ -0.5
COL21A1-201ENST00000244728 ANO8Q9HCE9 1232 aaPredicted RBP11.92□□□□□ -0.5
COL21A1-201ENST00000244728 KIF15Q9NS87 1388 aa11.91□□□□□ -0.5
COL21A1-201ENST00000244728 WASHC2CQ9Y4E1 1318 aa11.91□□□□□ -0.5
COL21A1-201ENST00000244728 CCDC146Q8IYE0 955 aa11.91□□□□□ -0.5
COL21A1-201ENST00000244728 CASKIN1Q8WXD9 1431 aa11.91□□□□□ -0.5
COL21A1-201ENST00000244728 U2AF1L5P0DN76 240 aaPredicted RBP11.91□□□□□ -0.5
COL21A1-201ENST00000244728 U2AF1Q01081 240 aaKnown RBP eCLIP11.91□□□□□ -0.5
COL21A1-201ENST00000244728 NAP1L5Q96NT1 182 aaPredicted RBP11.9□□□□□ -0.5
COL21A1-201ENST00000244728 GSE1Q14687 1217 aa11.9□□□□□ -0.5
COL21A1-201ENST00000244728 NBPF8Q3BBV2 869 aa11.9□□□□□ -0.5
COL21A1-201ENST00000244728 SLKQ9H2G2 1235 aaPredicted RBP11.9□□□□□ -0.5
COL21A1-201ENST00000244728 HFM1A2PYH4 1435 aa11.9□□□□□ -0.51
COL21A1-201ENST00000244728 HAP1P54257 671 aaPredicted RBP11.9□□□□□ -0.51
COL21A1-201ENST00000244728 CRBNQ96SW2 442 aa11.9□□□□□ -0.51
COL21A1-201ENST00000244728 NCOA2Q15596 1464 aa11.89□□□□□ -0.51
COL21A1-201ENST00000244728 C11orf95C9JLR9 678 aaPredicted RBP11.89□□□□□ -0.51
COL21A1-201ENST00000244728 MS4A1P11836 297 aa11.88□□□□□ -0.51
COL21A1-201ENST00000244728 PANK3Q9H999 370 aa11.88□□□□□ -0.51
COL21A1-201ENST00000244728 FYCO1Q9BQS8 1478 aa11.87□□□□□ -0.51
COL21A1-201ENST00000244728 SPRYD3Q8NCJ5 442 aa11.87□□□□□ -0.51
COL21A1-201ENST00000244728 TRIM44Q96DX7 344 aaPredicted RBP11.87□□□□□ -0.51
COL21A1-201ENST00000244728 RSPH4AQ5TD94 716 aa11.86□□□□□ -0.51
COL21A1-201ENST00000244728 CFTRP13569 1480 aa11.86□□□□□ -0.51
COL21A1-201ENST00000244728 TPRNQ4KMQ1 711 aa11.86□□□□□ -0.51
COL21A1-201ENST00000244728 CLUAP1Q96AJ1 413 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms