RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 SENP3-EIF4A1A0A087X0R7 540 aa23.5■■□□□ 1.35
SSPN-201ENST00000242729 CHMP7Q8WUX9 453 aaPredicted RBP23.5■■□□□ 1.35
SSPN-201ENST00000242729 WDR62O43379 1518 aa23.48■■□□□ 1.35
SSPN-201ENST00000242729 TCOF1Q13428 1488 aaKnown RBP23.47■■□□□ 1.35
SSPN-201ENST00000242729 PRG4Q92954 1404 aaPredicted RBP23.47■■□□□ 1.35
SSPN-201ENST00000242729 FAM9BQ8IZU0 186 aa23.46■■□□□ 1.35
SSPN-201ENST00000242729 CFDP1Q9UEE9 299 aaPredicted RBP23.45■■□□□ 1.34
SSPN-201ENST00000242729 DAPK1P53355 1430 aa23.43■■□□□ 1.34
SSPN-201ENST00000242729 DISP1Q96F81 1524 aa23.42■■□□□ 1.34
SSPN-201ENST00000242729 ABCC5O15440 1437 aa23.42■■□□□ 1.34
SSPN-201ENST00000242729 NUP153P49790 1475 aaKnown RBP23.42■■□□□ 1.34
SSPN-201ENST00000242729 MIA2Q96PC5 1412 aa23.4■■□□□ 1.34
SSPN-201ENST00000242729 CDK11AQ9UQ88 783 aaPredicted RBP23.4■■□□□ 1.34
SSPN-201ENST00000242729 PLB1Q6P1J6 1458 aa23.4■■□□□ 1.34
SSPN-201ENST00000242729 GCC2Q8IWJ2 1684 aa23.37■■□□□ 1.33
SSPN-201ENST00000242729 ERCC6Q03468 1493 aa23.36■■□□□ 1.33
SSPN-201ENST00000242729 KIAA0586Q9BVV6 1533 aa23.36■■□□□ 1.33
SSPN-201ENST00000242729 IFT140Q96RY7 1462 aa23.36■■□□□ 1.33
SSPN-201ENST00000242729 ANKRD30BQ9BXX2 1392 aa23.35■■□□□ 1.33
SSPN-201ENST00000242729 KIAA0556O60303 1618 aa23.35■■□□□ 1.33
SSPN-201ENST00000242729 GRIN2AQ12879 1464 aa23.34■■□□□ 1.33
SSPN-201ENST00000242729 MRS2Q9HD23 443 aa23.33■■□□□ 1.33
SSPN-201ENST00000242729 PKD2Q13563 968 aa23.31■■□□□ 1.32
SSPN-201ENST00000242729 JPH4Q96JJ6 628 aa23.31■■□□□ 1.32
SSPN-201ENST00000242729 CCDC7Q96M83 1385 aa23.3■■□□□ 1.32
SSPN-201ENST00000242729 PRKRIP1Q9H875 184 aaPredicted RBP23.29■■□□□ 1.32
SSPN-201ENST00000242729 EIF4G3O43432 1585 aaKnown RBP23.29■■□□□ 1.32
SSPN-201ENST00000242729 KIF7Q2M1P5 1343 aa23.29■■□□□ 1.32
SSPN-201ENST00000242729 KDM2AQ9Y2K7 1162 aa23.28■■□□□ 1.32
SSPN-201ENST00000242729 AKNAQ7Z591 1439 aa23.27■■□□□ 1.32
SSPN-201ENST00000242729 RAPGEF6Q8TEU7 1601 aa23.27■■□□□ 1.32
SSPN-201ENST00000242729 CNTLNQ9NXG0 1405 aa23.26■■□□□ 1.31
SSPN-201ENST00000242729 RPRD2Q5VT52 1461 aaKnown RBP23.25■■□□□ 1.31
SSPN-201ENST00000242729 CAMSAP2Q08AD1 1489 aa23.24■■□□□ 1.31
SSPN-201ENST00000242729 ROCK1Q13464 1354 aa23.23■■□□□ 1.31
SSPN-201ENST00000242729 KIF14Q15058 1648 aa23.23■■□□□ 1.31
SSPN-201ENST00000242729 DNMT1P26358 1616 aaKnown RBP23.22■■□□□ 1.31
SSPN-201ENST00000242729 TROQ12816 1431 aaPredicted RBP23.22■■□□□ 1.31
SSPN-201ENST00000242729 HNRNPMP52272 730 aaKnown RBP eCLIP23.22■■□□□ 1.31
SSPN-201ENST00000242729 RBM19Q9Y4C8 960 aaKnown RBP23.22■■□□□ 1.31
SSPN-201ENST00000242729 TEX14Q8IWB6 1497 aa23.21■■□□□ 1.31
SSPN-201ENST00000242729 PLEKHD1A6NEE1 506 aa23.2■■□□□ 1.3
SSPN-201ENST00000242729 NCOA1Q15788 1441 aa23.2■■□□□ 1.3
SSPN-201ENST00000242729 GPATCH8Q9UKJ3 1502 aaKnown RBP23.2■■□□□ 1.3
SSPN-201ENST00000242729 CEP170Q5SW79 1584 aa23.19■■□□□ 1.3
SSPN-201ENST00000242729 PZPP20742 1482 aa23.18■■□□□ 1.3
SSPN-201ENST00000242729 NUP155O75694 1391 aa23.15■■□□□ 1.3
SSPN-201ENST00000242729 SYNJ2O15056 1496 aa23.11■■□□□ 1.29
SSPN-201ENST00000242729 USP47Q96K76 1375 aa23.1■■□□□ 1.29
SSPN-201ENST00000242729 ANKRD30AQ9BXX3 1397 aa23.1■■□□□ 1.29
SSPN-201ENST00000242729 CARMIL2Q6F5E8 1435 aa23.1■■□□□ 1.29
SSPN-201ENST00000242729 ANKRD50Q9ULJ7 1429 aa23.1■■□□□ 1.29
SSPN-201ENST00000242729 TSPY4P0CV99 314 aa23.1■■□□□ 1.29
SSPN-201ENST00000242729 TSPY10P0CW01 314 aa23.1■■□□□ 1.29
SSPN-201ENST00000242729 B4GALNT3Q6L9W6 998 aa23.09■■□□□ 1.29
SSPN-201ENST00000242729 SPATA31E1Q6ZUB1 1445 aa23.09■■□□□ 1.29
SSPN-201ENST00000242729 DCAF11Q8TEB1 546 aa23.09■■□□□ 1.29
SSPN-201ENST00000242729 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.09■■□□□ 1.29
SSPN-201ENST00000242729 RGL3Q3MIN7 710 aa23.08■■□□□ 1.29
SSPN-201ENST00000242729 CARD11Q9BXL7 1154 aa23.08■■□□□ 1.29
SSPN-201ENST00000242729 KIAA1107Q9UPP5 1409 aa23.07■■□□□ 1.28
SSPN-201ENST00000242729 MYT1Q01538 1121 aa23.07■■□□□ 1.28
SSPN-201ENST00000242729 MAGI1Q96QZ7 1491 aaPredicted RBP23.06■■□□□ 1.28
SSPN-201ENST00000242729 ANP32EQ9BTT0 268 aa23.04■■□□□ 1.28
SSPN-201ENST00000242729 ATP10BO94823 1461 aa23.03■■□□□ 1.28
SSPN-201ENST00000242729 ST20-MTHFSA0A0A6YYL1 179 aa23.02■■□□□ 1.28
SSPN-201ENST00000242729 SALL2Q9Y467 1007 aaPredicted RBP23.02■■□□□ 1.28
SSPN-201ENST00000242729 C9orf84Q5VXU9 1444 aa23.01■■□□□ 1.27
SSPN-201ENST00000242729 KIF15Q9NS87 1388 aa22.98■■□□□ 1.27
SSPN-201ENST00000242729 ZBED9Q6R2W3 1325 aa22.97■■□□□ 1.27
SSPN-201ENST00000242729 BCORL1Q5H9F3 1711 aa22.97■■□□□ 1.27
SSPN-201ENST00000242729 DHX29Q7Z478 1369 aaKnown RBP22.96■■□□□ 1.27
SSPN-201ENST00000242729 ITSN2Q9NZM3 1697 aa22.95■■□□□ 1.26
SSPN-201ENST00000242729 NUP160Q12769 1436 aa22.95■■□□□ 1.26
SSPN-201ENST00000242729 TMC1Q8TDI8 760 aa22.94■■□□□ 1.26
SSPN-201ENST00000242729 PTPRGP23470 1445 aa22.93■■□□□ 1.26
SSPN-201ENST00000242729 MSH5O43196 834 aa22.92■■□□□ 1.26
SSPN-201ENST00000242729 PPP4R2Q9NY27 417 aa22.92■■□□□ 1.26
SSPN-201ENST00000242729 ADGRL2O95490 1459 aa22.91■■□□□ 1.26
SSPN-201ENST00000242729 ADGBQ8N7X0 1667 aa22.91■■□□□ 1.26
SSPN-201ENST00000242729 MBD5Q9P267 1494 aa22.9■■□□□ 1.26
SSPN-201ENST00000242729 NBPF1Q3BBV0 1214 aa22.9■■□□□ 1.26
SSPN-201ENST00000242729 CDC42BPAQ5VT25 1732 aa22.9■■□□□ 1.26
SSPN-201ENST00000242729 ABCC10Q5T3U5 1492 aa22.9■■□□□ 1.26
SSPN-201ENST00000242729 ROCK2O75116 1388 aaKnown RBP22.87■■□□□ 1.25
SSPN-201ENST00000242729 CROCC2H7BZ55 1655 aa22.86■■□□□ 1.25
SSPN-201ENST00000242729 ABCA8O94911 1581 aa22.86■■□□□ 1.25
SSPN-201ENST00000242729 ADCY10Q96PN6 1610 aa22.84■■□□□ 1.25
SSPN-201ENST00000242729 PNISRQ8TF01 805 aaKnown RBP22.82■■□□□ 1.24
SSPN-201ENST00000242729 KDM5CP41229 1560 aa22.82■■□□□ 1.24
SSPN-201ENST00000242729 CC2D1BQ5T0F9 858 aaKnown RBP22.79■■□□□ 1.24
SSPN-201ENST00000242729 NUDCQ9Y266 331 aa22.77■■□□□ 1.24
SSPN-201ENST00000242729 RALGAPBQ86X10 1494 aa22.76■■□□□ 1.23
SSPN-201ENST00000242729 CCDC144AA2RUR9 1427 aa22.74■■□□□ 1.23
SSPN-201ENST00000242729 SYCP2Q9BX26 1530 aa22.74■■□□□ 1.23
SSPN-201ENST00000242729 SAMD9LQ8IVG5 1584 aa22.74■■□□□ 1.23
SSPN-201ENST00000242729 ARHGAP5Q13017 1502 aa22.73■■□□□ 1.23
SSPN-201ENST00000242729 CCDC141Q6ZP82 1450 aa22.73■■□□□ 1.23
SSPN-201ENST00000242729 CCDC136Q96JN2 1154 aa22.72■■□□□ 1.23
SSPN-201ENST00000242729 POLR1AO95602 1720 aaPredicted RBP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms