RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 ATXN8OSP0DMR3 200 aa5.74□□□□□ -1.49
UFM1-201ENST00000239878 DIP2BQ9P265 1576 aa5.74□□□□□ -1.49
UFM1-201ENST00000239878 MAP3K4Q9Y6R4 1608 aa5.74□□□□□ -1.49
UFM1-201ENST00000239878 UACAQ9BZF9 1416 aa5.73□□□□□ -1.49
UFM1-201ENST00000239878 PCF11O94913 1555 aaKnown RBP5.73□□□□□ -1.49
UFM1-201ENST00000239878 CFAP43Q8NDM7 1665 aa5.73□□□□□ -1.49
UFM1-201ENST00000239878 PKD2Q13563 968 aa5.73□□□□□ -1.49
UFM1-201ENST00000239878 PLB1Q6P1J6 1458 aa5.72□□□□□ -1.49
UFM1-201ENST00000239878 HECW1Q76N89 1606 aa5.72□□□□□ -1.49
UFM1-201ENST00000239878 PLSCR2Q9NRY7 297 aa5.72□□□□□ -1.49
UFM1-201ENST00000239878 FYCO1Q9BQS8 1478 aa5.72□□□□□ -1.49
UFM1-201ENST00000239878 C14orf37Q86TY3 774 aa5.71□□□□□ -1.5
UFM1-201ENST00000239878 ZNF219Q9P2Y4 722 aaPredicted RBP5.71□□□□□ -1.5
UFM1-201ENST00000239878 MAP3K1Q13233 1512 aa5.71□□□□□ -1.5
UFM1-201ENST00000239878 CASKIN1Q8WXD9 1431 aa5.71□□□□□ -1.5
UFM1-201ENST00000239878 PTPRGP23470 1445 aa5.71□□□□□ -1.5
UFM1-201ENST00000239878 FHOD3Q2V2M9 1422 aa5.71□□□□□ -1.5
UFM1-201ENST00000239878 ABCA9Q8IUA7 1624 aa5.7□□□□□ -1.5
UFM1-201ENST00000239878 NPM1P06748 294 aaKnown RBP eCLIP5.7□□□□□ -1.5
UFM1-201ENST00000239878 ATP10BO94823 1461 aa5.7□□□□□ -1.5
UFM1-201ENST00000239878 ABCC10Q5T3U5 1492 aa5.7□□□□□ -1.5
UFM1-201ENST00000239878 CEP162Q5TB80 1403 aa5.7□□□□□ -1.5
UFM1-201ENST00000239878 MAGI3Q5TCQ9 1506 aa5.7□□□□□ -1.5
UFM1-201ENST00000239878 SLC4A2P04920 1241 aa5.69□□□□□ -1.5
UFM1-201ENST00000239878 FMN1Q68DA7 1419 aa5.69□□□□□ -1.5
UFM1-201ENST00000239878 EPRSP07814 1512 aaKnown RBP5.68□□□□□ -1.5
UFM1-201ENST00000239878 ARAP3Q8WWN8 1544 aa5.68□□□□□ -1.5
UFM1-201ENST00000239878 CLIP1P30622 1438 aa5.68□□□□□ -1.5
UFM1-201ENST00000239878 WDR7Q9Y4E6 1490 aa5.68□□□□□ -1.5
UFM1-201ENST00000239878 BBXQ8WY36 941 aaPredicted RBP5.68□□□□□ -1.5
UFM1-201ENST00000239878 CCDC18Q5T9S5 1454 aa5.67□□□□□ -1.5
UFM1-201ENST00000239878 ABCB7O75027 752 aa5.67□□□□□ -1.5
UFM1-201ENST00000239878 ASXL2Q76L83 1435 aa5.67□□□□□ -1.5
UFM1-201ENST00000239878 TRIM26Q12899 539 aaPredicted RBP5.66□□□□□ -1.5
UFM1-201ENST00000239878 TTC37Q6PGP7 1564 aa5.66□□□□□ -1.5
UFM1-201ENST00000239878 CDK13Q14004 1512 aaKnown RBP5.66□□□□□ -1.5
UFM1-201ENST00000239878 TSHZ2Q9NRE2 1034 aa5.65□□□□□ -1.5
UFM1-201ENST00000239878 VPS8Q8N3P4 1428 aa5.65□□□□□ -1.5
UFM1-201ENST00000239878 TIAM1Q13009 1591 aa5.65□□□□□ -1.5
UFM1-201ENST00000239878 HAX1O00165 279 aa5.65□□□□□ -1.5
UFM1-201ENST00000239878 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.65□□□□□ -1.51
UFM1-201ENST00000239878 FRMPD1Q5SYB0 1578 aa5.64□□□□□ -1.51
UFM1-201ENST00000239878 KIF14Q15058 1648 aa5.64□□□□□ -1.51
UFM1-201ENST00000239878 PREX2Q70Z35 1606 aa5.64□□□□□ -1.51
UFM1-201ENST00000239878 NPM2Q86SE8 214 aaKnown RBP5.64□□□□□ -1.51
UFM1-201ENST00000239878 LHX8Q68G74 356 aa5.64□□□□□ -1.51
UFM1-201ENST00000239878 EHBP1L1Q8N3D4 1523 aa5.63□□□□□ -1.51
UFM1-201ENST00000239878 TRHP20396 242 aaPredicted RBP5.63□□□□□ -1.51
UFM1-201ENST00000239878 PAXIP1Q6ZW49 1069 aaPredicted RBP5.63□□□□□ -1.51
UFM1-201ENST00000239878 IFNLR1Q8IU57 520 aaPredicted RBP5.63□□□□□ -1.51
UFM1-201ENST00000239878 UBTFP17480 764 aaKnown RBP5.63□□□□□ -1.51
UFM1-201ENST00000239878 CDC42BPAQ5VT25 1732 aa5.62□□□□□ -1.51
UFM1-201ENST00000239878 CDC42BPBQ9Y5S2 1711 aa5.62□□□□□ -1.51
UFM1-201ENST00000239878 TROQ12816 1431 aaPredicted RBP5.62□□□□□ -1.51
UFM1-201ENST00000239878 PIP4P2Q8N4L2 257 aa5.62□□□□□ -1.51
UFM1-201ENST00000239878 CFAP74Q9C0B2 1584 aa5.62□□□□□ -1.51
UFM1-201ENST00000239878 CYB5RLQ6IPT4 315 aa5.61□□□□□ -1.51
UFM1-201ENST00000239878 PCGF6Q9BYE7 350 aa5.61□□□□□ -1.51
UFM1-201ENST00000239878 ZMYM4Q5VZL5 1548 aa5.61□□□□□ -1.51
UFM1-201ENST00000239878 MYO5CQ9NQX4 1742 aa5.61□□□□□ -1.51
UFM1-201ENST00000239878 RICTORQ6R327 1708 aa5.61□□□□□ -1.51
UFM1-201ENST00000239878 FBXO3Q9UK99 471 aa5.61□□□□□ -1.51
UFM1-201ENST00000239878 KDM5CP41229 1560 aa5.6□□□□□ -1.51
UFM1-201ENST00000239878 ITSN2Q9NZM3 1697 aa5.6□□□□□ -1.51
UFM1-201ENST00000239878 LRRC9Q6ZRR7 1453 aa5.59□□□□□ -1.51
UFM1-201ENST00000239878 NEO1Q92859 1461 aa5.59□□□□□ -1.51
UFM1-201ENST00000239878 CENPBP07199 599 aaPredicted RBP5.59□□□□□ -1.51
UFM1-201ENST00000239878 ABCC1P33527 1531 aa5.59□□□□□ -1.51
UFM1-201ENST00000239878 ACIN1Q9UKV3 1341 aaKnown RBP5.59□□□□□ -1.52
UFM1-201ENST00000239878 NEUROD1Q13562 356 aa5.59□□□□□ -1.52
UFM1-201ENST00000239878 SUPT6HQ7KZ85 1726 aaKnown RBP5.58□□□□□ -1.52
UFM1-201ENST00000239878 SAMD9LQ8IVG5 1584 aa5.58□□□□□ -1.52
UFM1-201ENST00000239878 AKT1S1Q96B36 256 aa5.58□□□□□ -1.52
UFM1-201ENST00000239878 LOC105371045A0A1W2PR82 267 aa5.58□□□□□ -1.52
UFM1-201ENST00000239878 CFAP44Q96MT7 982 aa5.58□□□□□ -1.52
UFM1-201ENST00000239878 REREQ9P2R6 1566 aa5.58□□□□□ -1.52
UFM1-201ENST00000239878 CROCC2H7BZ55 1655 aa5.57□□□□□ -1.52
UFM1-201ENST00000239878 PLCH2O75038 1416 aa5.57□□□□□ -1.52
UFM1-201ENST00000239878 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.57□□□□□ -1.52
UFM1-201ENST00000239878 BCORL1Q5H9F3 1711 aa5.57□□□□□ -1.52
UFM1-201ENST00000239878 TCOF1Q13428 1488 aaKnown RBP5.57□□□□□ -1.52
UFM1-201ENST00000239878 PROM2Q8N271 834 aa5.57□□□□□ -1.52
UFM1-201ENST00000239878 COL17A1Q9UMD9 1497 aaPredicted RBP5.57□□□□□ -1.52
UFM1-201ENST00000239878 INO80Q9ULG1 1556 aaPredicted RBP5.57□□□□□ -1.52
UFM1-201ENST00000239878 GPATCH8Q9UKJ3 1502 aaKnown RBP5.57□□□□□ -1.52
UFM1-201ENST00000239878 TEX14Q8IWB6 1497 aa5.57□□□□□ -1.52
UFM1-201ENST00000239878 VASPP50552 380 aaPredicted RBP5.57□□□□□ -1.52
UFM1-201ENST00000239878 SIGLEC1Q9BZZ2 1709 aa5.56□□□□□ -1.52
UFM1-201ENST00000239878 ARHGEF5Q12774 1597 aa5.56□□□□□ -1.52
UFM1-201ENST00000239878 MAST1Q9Y2H9 1570 aa5.56□□□□□ -1.52
UFM1-201ENST00000239878 PHLDB1Q86UU1 1377 aa5.56□□□□□ -1.52
UFM1-201ENST00000239878 MYCNP04198 464 aaPredicted RBP5.56□□□□□ -1.52
UFM1-201ENST00000239878 ARHGEF12Q9NZN5 1544 aa5.56□□□□□ -1.52
UFM1-201ENST00000239878 ARHGEF40Q8TER5 1519 aa5.55□□□□□ -1.52
UFM1-201ENST00000239878 PLXNC1O60486 1568 aa5.55□□□□□ -1.52
UFM1-201ENST00000239878 NBR1Q14596 966 aa5.55□□□□□ -1.52
UFM1-201ENST00000239878 NCOA2Q15596 1464 aa5.55□□□□□ -1.52
UFM1-201ENST00000239878 MBD5Q9P267 1494 aa5.54□□□□□ -1.52
UFM1-201ENST00000239878 KIAA1107Q9UPP5 1409 aa5.54□□□□□ -1.52
UFM1-201ENST00000239878 P3H3Q8IVL6 736 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms