RNA–Protein interactions for RNA: ENST00000239852.10

MTRF1-201, Transcript of mitochondrial translation release factor 1, humanhuman

TSL 1 (best)

Gene MTRF1, Length 1,561 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTRF1-201ENST00000239852 RNF39Q9H2S5 420 aa12.16□□□□□ -0.46
MTRF1-201ENST00000239852 ZNF335Q9H4Z2 1342 aaPredicted RBP12.15□□□□□ -0.46
MTRF1-201ENST00000239852 RANGAP1P46060 587 aaPredicted RBP12.14□□□□□ -0.47
MTRF1-201ENST00000239852 MAPK8IP2Q13387 824 aaPredicted RBP12.14□□□□□ -0.47
MTRF1-201ENST00000239852 FRMPD1Q5SYB0 1578 aa12.13□□□□□ -0.47
MTRF1-201ENST00000239852 NCOA1Q15788 1441 aa12.13□□□□□ -0.47
MTRF1-201ENST00000239852 IFFO2Q5TF58 517 aa12.12□□□□□ -0.47
MTRF1-201ENST00000239852 CEBPAP49715 358 aaPredicted RBP12.11□□□□□ -0.47
MTRF1-201ENST00000239852 POTEAQ6S8J7 498 aa12.11□□□□□ -0.47
MTRF1-201ENST00000239852 AKNAQ7Z591 1439 aa12.11□□□□□ -0.47
MTRF1-201ENST00000239852 NEO1Q92859 1461 aa12.11□□□□□ -0.47
MTRF1-201ENST00000239852 MLECQ14165 292 aa12.1□□□□□ -0.47
MTRF1-201ENST00000239852 UPF1Q92900 1129 aaKnown RBP eCLIP12.09□□□□□ -0.47
MTRF1-201ENST00000239852 SETD1AO15047 1707 aaKnown RBP12.06□□□□□ -0.48
MTRF1-201ENST00000239852 ARHGEF12Q9NZN5 1544 aa12.06□□□□□ -0.48
MTRF1-201ENST00000239852 KIAA0556O60303 1618 aa12.05□□□□□ -0.48
MTRF1-201ENST00000239852 SIGLEC1Q9BZZ2 1709 aa12.04□□□□□ -0.48
MTRF1-201ENST00000239852 DISP1Q96F81 1524 aa12.03□□□□□ -0.48
MTRF1-201ENST00000239852 EIF5BO60841 1220 aaKnown RBP12.02□□□□□ -0.49
MTRF1-201ENST00000239852 FHOD3Q2V2M9 1422 aa12□□□□□ -0.49
MTRF1-201ENST00000239852 PTPRKQ15262 1439 aa11.99□□□□□ -0.49
MTRF1-201ENST00000239852 DENND4BO75064 1496 aaPredicted RBP11.99□□□□□ -0.49
MTRF1-201ENST00000239852 BIVM-ERCC5R4GMW8 1640 aa11.99□□□□□ -0.49
MTRF1-201ENST00000239852 EFCAB5A4FU69 1503 aa11.99□□□□□ -0.49
MTRF1-201ENST00000239852 IQGAP2Q13576 1575 aa11.99□□□□□ -0.49
MTRF1-201ENST00000239852 ABCA9Q8IUA7 1624 aa11.99□□□□□ -0.49
MTRF1-201ENST00000239852 ZFYVE16Q7Z3T8 1539 aa11.98□□□□□ -0.49
MTRF1-201ENST00000239852 RICTORQ6R327 1708 aa11.98□□□□□ -0.49
MTRF1-201ENST00000239852 CAMSAP1Q5T5Y3 1602 aa11.97□□□□□ -0.49
MTRF1-201ENST00000239852 ZMYM4Q5VZL5 1548 aa11.97□□□□□ -0.49
MTRF1-201ENST00000239852 MAGI2Q86UL8 1455 aa11.97□□□□□ -0.49
MTRF1-201ENST00000239852 NCKAP5LQ9HCH0 1330 aa11.97□□□□□ -0.49
MTRF1-201ENST00000239852 CPS1P31327 1500 aa11.95□□□□□ -0.5
MTRF1-201ENST00000239852 TRAPPC8Q9Y2L5 1435 aa11.95□□□□□ -0.5
MTRF1-201ENST00000239852 PKD2Q13563 968 aa11.95□□□□□ -0.5
MTRF1-201ENST00000239852 ALKQ9UM73 1620 aa11.93□□□□□ -0.5
MTRF1-201ENST00000239852 IGF1RP08069 1367 aa11.92□□□□□ -0.5
MTRF1-201ENST00000239852 C1QBPQ07021 282 aaKnown RBP11.9□□□□□ -0.5
MTRF1-201ENST00000239852 PLA2R1Q13018 1463 aa11.9□□□□□ -0.51
MTRF1-201ENST00000239852 UGGT2Q9NYU1 1516 aa11.89□□□□□ -0.51
MTRF1-201ENST00000239852 C3P01024 1663 aa11.89□□□□□ -0.51
MTRF1-201ENST00000239852 ATP10AO60312 1499 aa11.87□□□□□ -0.51
MTRF1-201ENST00000239852 ABCA8O94911 1581 aa11.87□□□□□ -0.51
MTRF1-201ENST00000239852 C9orf84Q5VXU9 1444 aa11.87□□□□□ -0.51
MTRF1-201ENST00000239852 TCOF1Q13428 1488 aaKnown RBP11.87□□□□□ -0.51
MTRF1-201ENST00000239852 HOMEZQ8IX15 550 aa11.86□□□□□ -0.51
MTRF1-201ENST00000239852 SHANK2Q9UPX8 1470 aa11.85□□□□□ -0.51
MTRF1-201ENST00000239852 RAPGEF2Q9Y4G8 1499 aa11.84□□□□□ -0.51
MTRF1-201ENST00000239852 RBM33Q96EV2 1170 aaKnown RBP11.84□□□□□ -0.51
MTRF1-201ENST00000239852 HECW1Q76N89 1606 aa11.83□□□□□ -0.52
MTRF1-201ENST00000239852 ZRANB1Q9UGI0 708 aa11.82□□□□□ -0.52
MTRF1-201ENST00000239852 CARMIL1Q5VZK9 1371 aa11.81□□□□□ -0.52
MTRF1-201ENST00000239852 NPATQ14207 1427 aa11.81□□□□□ -0.52
MTRF1-201ENST00000239852 ESF1Q9H501 851 aaKnown RBP11.8□□□□□ -0.52
MTRF1-201ENST00000239852 CFAP74Q9C0B2 1584 aa11.8□□□□□ -0.52
MTRF1-201ENST00000239852 TRIM52Q96A61 297 aa11.79□□□□□ -0.52
MTRF1-201ENST00000239852 TIMELESSQ9UNS1 1208 aa11.78□□□□□ -0.52
MTRF1-201ENST00000239852 ATP10BO94823 1461 aa11.78□□□□□ -0.52
MTRF1-201ENST00000239852 KIF27Q86VH2 1401 aa11.76□□□□□ -0.53
MTRF1-201ENST00000239852 SETBP1Q9Y6X0 1596 aa11.76□□□□□ -0.53
MTRF1-201ENST00000239852 LRRC7Q96NW7 1537 aa11.76□□□□□ -0.53
MTRF1-201ENST00000239852 CNTLNQ9NXG0 1405 aa11.76□□□□□ -0.53
MTRF1-201ENST00000239852 ZNF142P52746 1687 aaPredicted RBP11.74□□□□□ -0.53
MTRF1-201ENST00000239852 DCAF8L1A6NGE4 600 aa11.74□□□□□ -0.53
MTRF1-201ENST00000239852 RNF17Q9BXT8 1623 aaKnown RBP11.74□□□□□ -0.53
MTRF1-201ENST00000239852 SUPT6HQ7KZ85 1726 aaKnown RBP11.73□□□□□ -0.53
MTRF1-201ENST00000239852 ZNF772Q68DY9 489 aaPredicted RBP11.73□□□□□ -0.53
MTRF1-201ENST00000239852 AGLP35573 1532 aa11.72□□□□□ -0.53
MTRF1-201ENST00000239852 ARID3CA6NKF2 412 aa11.72□□□□□ -0.53
MTRF1-201ENST00000239852 CDK12Q9NYV4 1490 aaPredicted RBP11.72□□□□□ -0.53
MTRF1-201ENST00000239852 VWDEQ8N2E2 1590 aa11.7□□□□□ -0.54
MTRF1-201ENST00000239852 CEP170BQ9Y4F5 1589 aaPredicted RBP11.7□□□□□ -0.54
MTRF1-201ENST00000239852 GOLGA3Q08378 1498 aa11.7□□□□□ -0.54
MTRF1-201ENST00000239852 RXRBP28702 533 aa11.7□□□□□ -0.54
MTRF1-201ENST00000239852 SCAPERQ9BY12 1400 aa11.69□□□□□ -0.54
MTRF1-201ENST00000239852 FAM135BQ49AJ0 1406 aa11.68□□□□□ -0.54
MTRF1-201ENST00000239852 REREQ9P2R6 1566 aa11.68□□□□□ -0.54
MTRF1-201ENST00000239852 FAM9AQ8IZU1 332 aaPredicted RBP11.67□□□□□ -0.54
MTRF1-201ENST00000239852 MYO3AQ8NEV4 1616 aa11.67□□□□□ -0.54
MTRF1-201ENST00000239852 MROH2AA6NES4 1674 aa11.65□□□□□ -0.55
MTRF1-201ENST00000239852 NEURL4Q96JN8 1562 aa11.65□□□□□ -0.55
MTRF1-201ENST00000239852 YY1P25490 414 aa11.64□□□□□ -0.55
MTRF1-201ENST00000239852 BCL11AQ9H165 835 aa11.64□□□□□ -0.55
MTRF1-201ENST00000239852 POLR1AO95602 1720 aaPredicted RBP11.64□□□□□ -0.55
MTRF1-201ENST00000239852 ZMYM3Q14202 1370 aa11.64□□□□□ -0.55
MTRF1-201ENST00000239852 SYNMO15061 1565 aa11.63□□□□□ -0.55
MTRF1-201ENST00000239852 LRP5O75197 1615 aa11.63□□□□□ -0.55
MTRF1-201ENST00000239852 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.63□□□□□ -0.55
MTRF1-201ENST00000239852 TULP1O00294 542 aaPredicted RBP11.62□□□□□ -0.55
MTRF1-201ENST00000239852 JCADQ9P266 1359 aa11.61□□□□□ -0.55
MTRF1-201ENST00000239852 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.6□□□□□ -0.55
MTRF1-201ENST00000239852 HNRNPUL2Q1KMD3 747 aaKnown RBP11.6□□□□□ -0.55
MTRF1-201ENST00000239852 DIP2CQ9Y2E4 1556 aa11.6□□□□□ -0.55
MTRF1-201ENST00000239852 A2ML1A8K2U0 1454 aa11.6□□□□□ -0.55
MTRF1-201ENST00000239852 CDK13Q14004 1512 aaKnown RBP11.59□□□□□ -0.55
MTRF1-201ENST00000239852 RAPGEF6Q8TEU7 1601 aa11.59□□□□□ -0.55
MTRF1-201ENST00000239852 KCNA4P22459 653 aa11.58□□□□□ -0.55
MTRF1-201ENST00000239852 TAOK2Q9UL54 1235 aa11.58□□□□□ -0.55
MTRF1-201ENST00000239852 ZNF518AQ6AHZ1 1483 aa11.58□□□□□ -0.56
MTRF1-201ENST00000239852 DNMT1P26358 1616 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms