RNA–Protein interactions for RNA: ENST00000239690.8

NUDCD1-201, Transcript of NudC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD1, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-201ENST00000239690 FTSJ3Q8IY81 847 aaKnown RBP12.21□□□□□ -0.45
NUDCD1-201ENST00000239690 PKNOX2Q96KN3 472 aa12.21□□□□□ -0.45
NUDCD1-201ENST00000239690 CDCA8Q53HL2 280 aa12.21□□□□□ -0.46
NUDCD1-201ENST00000239690 RGL3Q3MIN7 710 aa12.2□□□□□ -0.46
NUDCD1-201ENST00000239690 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.2□□□□□ -0.464e-6■■□□□ 11.7
NUDCD1-201ENST00000239690 FOXD1Q16676 465 aa12.2□□□□□ -0.46
NUDCD1-201ENST00000239690 CENPQQ7L2Z9 268 aaPredicted RBP12.2□□□□□ -0.46
NUDCD1-201ENST00000239690 NLRP13Q86W25 1043 aa12.19□□□□□ -0.46
NUDCD1-201ENST00000239690 GBP4Q96PP9 640 aa12.19□□□□□ -0.46
NUDCD1-201ENST00000239690 KIF21BO75037 1637 aa12.18□□□□□ -0.46
NUDCD1-201ENST00000239690 ROCK2O75116 1388 aaKnown RBP12.18□□□□□ -0.46
NUDCD1-201ENST00000239690 PTMSP20962 102 aa12.18□□□□□ -0.46
NUDCD1-201ENST00000239690 CNTLNQ9NXG0 1405 aa12.17□□□□□ -0.46
NUDCD1-201ENST00000239690 RRBP1Q9P2E9 1410 aaKnown RBP12.17□□□□□ -0.46
NUDCD1-201ENST00000239690 FAM43AQ8N2R8 423 aa12.17□□□□□ -0.46
NUDCD1-201ENST00000239690 FBLN2P98095 1184 aa12.16□□□□□ -0.46
NUDCD1-201ENST00000239690 CUX2O14529 1486 aa12.16□□□□□ -0.46
NUDCD1-201ENST00000239690 CDK11BP21127 795 aaKnown RBP12.16□□□□□ -0.46
NUDCD1-201ENST00000239690 NEUROD2Q15784 382 aa12.16□□□□□ -0.46
NUDCD1-201ENST00000239690 WASHC2AQ641Q2 1341 aa12.15□□□□□ -0.46
NUDCD1-201ENST00000239690 CFDP1Q9UEE9 299 aaPredicted RBP12.15□□□□□ -0.46
NUDCD1-201ENST00000239690 MYBBP1AQ9BQG0 1328 aaKnown RBP12.14□□□□□ -0.47
NUDCD1-201ENST00000239690 PLIN1O60240 522 aa12.14□□□□□ -0.47
NUDCD1-201ENST00000239690 DCAF11Q8TEB1 546 aa12.14□□□□□ -0.47
NUDCD1-201ENST00000239690 CRBNQ96SW2 442 aa12.14□□□□□ -0.47
NUDCD1-201ENST00000239690 CCDC7Q96M83 1385 aa12.14□□□□□ -0.47
NUDCD1-201ENST00000239690 CCDC18Q5T9S5 1454 aa12.14□□□□□ -0.47
NUDCD1-201ENST00000239690 KIF15Q9NS87 1388 aa12.14□□□□□ -0.47
NUDCD1-201ENST00000239690 TMF1P82094 1093 aa12.14□□□□□ -0.47
NUDCD1-201ENST00000239690 UBE2Q2Q8WVN8 375 aa12.13□□□□□ -0.47
NUDCD1-201ENST00000239690 BACH2Q9BYV9 841 aa12.13□□□□□ -0.47
NUDCD1-201ENST00000239690 CFAP53Q96M91 514 aa12.12□□□□□ -0.47
NUDCD1-201ENST00000239690 GOLGA2Q08379 1002 aa12.12□□□□□ -0.47
NUDCD1-201ENST00000239690 PHLDB1Q86UU1 1377 aa12.11□□□□□ -0.47
NUDCD1-201ENST00000239690 DDX11L8A8MPP1 907 aa12.11□□□□□ -0.47
NUDCD1-201ENST00000239690 ARID3AQ99856 593 aa12.11□□□□□ -0.47
NUDCD1-201ENST00000239690 WDR97A6NE52 1622 aa12.1□□□□□ -0.47
NUDCD1-201ENST00000239690 MAPK8IP3Q9UPT6 1336 aa12.1□□□□□ -0.47
NUDCD1-201ENST00000239690 AKNAQ7Z591 1439 aa12.1□□□□□ -0.47
NUDCD1-201ENST00000239690 RWDD1Q9H446 243 aaPredicted RBP12.1□□□□□ -0.47
NUDCD1-201ENST00000239690 PMFBP1Q8TBY8 1022 aa12.1□□□□□ -0.47
NUDCD1-201ENST00000239690 FRAT2O75474 233 aaPredicted RBP12.1□□□□□ -0.47
NUDCD1-201ENST00000239690 CHAF1AQ13111 956 aaPredicted RBP12.09□□□□□ -0.47
NUDCD1-201ENST00000239690 PKD2Q13563 968 aa12.09□□□□□ -0.47
NUDCD1-201ENST00000239690 CASC1Q6TDU7 716 aa12.09□□□□□ -0.47
NUDCD1-201ENST00000239690 KIF7Q2M1P5 1343 aa12.08□□□□□ -0.48
NUDCD1-201ENST00000239690 UACAQ9BZF9 1416 aa12.08□□□□□ -0.48
NUDCD1-201ENST00000239690 CHGAP10645 457 aaKnown RBP12.08□□□□□ -0.48
NUDCD1-201ENST00000239690 SMG6Q86US8 1419 aaKnown RBP12.07□□□□□ -0.48
NUDCD1-201ENST00000239690 MFAP1P55081 439 aaKnown RBP12.07□□□□□ -0.48
NUDCD1-201ENST00000239690 PLCB2Q00722 1185 aa12.07□□□□□ -0.48
NUDCD1-201ENST00000239690 SLC24A1O60721 1099 aa12.07□□□□□ -0.48
NUDCD1-201ENST00000239690 CHMP4BQ9H444 224 aaKnown RBP12.06□□□□□ -0.48
NUDCD1-201ENST00000239690 SMARCA2P51531 1590 aa12.05□□□□□ -0.48
NUDCD1-201ENST00000239690 KIAA2012Q0VF49 1180 aa12.05□□□□□ -0.48
NUDCD1-201ENST00000239690 CCDC184Q52MB2 194 aa12.05□□□□□ -0.48
NUDCD1-201ENST00000239690 USP47Q96K76 1375 aa12.04□□□□□ -0.48
NUDCD1-201ENST00000239690 FHOD3Q2V2M9 1422 aa12.04□□□□□ -0.48
NUDCD1-201ENST00000239690 CALD1Q05682 793 aaKnown RBP12.03□□□□□ -0.48
NUDCD1-201ENST00000239690 SKOR2Q2VWA4 1001 aaPredicted RBP12.03□□□□□ -0.48
NUDCD1-201ENST00000239690 MRE11P49959 708 aa12.03□□□□□ -0.48
NUDCD1-201ENST00000239690 CHMP5Q9NZZ3 219 aa12.03□□□□□ -0.48
NUDCD1-201ENST00000239690 PLEKHD1A6NEE1 506 aa12.02□□□□□ -0.48
NUDCD1-201ENST00000239690 CGNL1Q0VF96 1302 aa12.02□□□□□ -0.48
NUDCD1-201ENST00000239690 ST20-MTHFSA0A0A6YYL1 179 aa12.02□□□□□ -0.49
NUDCD1-201ENST00000239690 RRP9O43818 475 aaKnown RBP12.02□□□□□ -0.49
NUDCD1-201ENST00000239690 CFAP44Q96MT7 982 aa12.01□□□□□ -0.49
NUDCD1-201ENST00000239690 CENPJQ9HC77 1338 aaPredicted RBP12.01□□□□□ -0.49
NUDCD1-201ENST00000239690 ARAP1Q96P48 1450 aa12.01□□□□□ -0.49
NUDCD1-201ENST00000239690 LRRC9Q6ZRR7 1453 aa12.01□□□□□ -0.49
NUDCD1-201ENST00000239690 TPRNQ4KMQ1 711 aa12.01□□□□□ -0.49
NUDCD1-201ENST00000239690 SMARCA4P51532 1647 aa12□□□□□ -0.49
NUDCD1-201ENST00000239690 FAM13BQ9NYF5 915 aa12□□□□□ -0.49
NUDCD1-201ENST00000239690 PDZRN4Q6ZMN7 1036 aaPredicted RBP12□□□□□ -0.49
NUDCD1-201ENST00000239690 TPM2P07951 284 aa11.99□□□□□ -0.49
NUDCD1-201ENST00000239690 BRD4O60885 1362 aaPredicted RBP11.99□□□□□ -0.49
NUDCD1-201ENST00000239690 FGD6Q6ZV73 1430 aa11.99□□□□□ -0.49
NUDCD1-201ENST00000239690 ZBTB7CA1YPR0 619 aa11.98□□□□□ -0.49
NUDCD1-201ENST00000239690 DDX49Q9Y6V7 483 aaKnown RBP11.98□□□□□ -0.49
NUDCD1-201ENST00000239690 MAP7D2Q96T17 732 aa11.98□□□□□ -0.49
NUDCD1-201ENST00000239690 C11orf95C9JLR9 678 aaPredicted RBP11.97□□□□□ -0.49
NUDCD1-201ENST00000239690 CLUAP1Q96AJ1 413 aa11.97□□□□□ -0.49
NUDCD1-201ENST00000239690 PNISRQ8TF01 805 aaKnown RBP11.97□□□□□ -0.49
NUDCD1-201ENST00000239690 SYAP1Q96A49 352 aaPredicted RBP11.97□□□□□ -0.49
NUDCD1-201ENST00000239690 NUP155O75694 1391 aa11.96□□□□□ -0.49
NUDCD1-201ENST00000239690 AMER1Q5JTC6 1135 aaPredicted RBP11.96□□□□□ -0.49
NUDCD1-201ENST00000239690 CCDC146Q8IYE0 955 aa11.96□□□□□ -0.5
NUDCD1-201ENST00000239690 ERICH3Q5RHP9 1530 aa11.95□□□□□ -0.5
NUDCD1-201ENST00000239690 IPO8O15397 1037 aaKnown RBP11.95□□□□□ -0.5
NUDCD1-201ENST00000239690 FOXD4L1Q9NU39 408 aa11.95□□□□□ -0.5
NUDCD1-201ENST00000239690 TRAK2O60296 914 aa11.95□□□□□ -0.5
NUDCD1-201ENST00000239690 COG6Q9Y2V7 657 aa11.95□□□□□ -0.5
NUDCD1-201ENST00000239690 ITPRIPQ8IWB1 547 aa11.95□□□□□ -0.5
NUDCD1-201ENST00000239690 CDCA7LQ96GN5 454 aa11.94□□□□□ -0.5
NUDCD1-201ENST00000239690 E9PSI1 815 aa11.94□□□□□ -0.5
NUDCD1-201ENST00000239690 MORC1Q86VD1 984 aa11.94□□□□□ -0.5
NUDCD1-201ENST00000239690 CSPP1Q1MSJ5 1256 aa11.93□□□□□ -0.5
NUDCD1-201ENST00000239690 MTERF4Q7Z6M4 381 aaKnown RBP11.93□□□□□ -0.5
NUDCD1-201ENST00000239690 PANK3Q9H999 370 aa11.93□□□□□ -0.5
NUDCD1-201ENST00000239690 U2SURPO15042 1029 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms