RNA–Protein interactions for RNA: ENST00000237596.6

PKD2-201, Transcript of polycystin 2, transient receptor potential cation channel, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKD2, Length 5,056 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD2-201ENST00000237596 MPHOSPH9Q99550 1183 aa24.23■■□□□ 1.47
PKD2-201ENST00000237596 HDGFL2Q7Z4V5 671 aaPredicted RBP24.22■■□□□ 1.47
PKD2-201ENST00000237596 PPP4R2Q9NY27 417 aa24.21■■□□□ 1.47
PKD2-201ENST00000237596 JPH4Q96JJ6 628 aa24.18■■□□□ 1.46
PKD2-201ENST00000237596 HNRNPMP52272 730 aaKnown RBP eCLIP24.16■■□□□ 1.46
PKD2-201ENST00000237596 RTF1Q92541 710 aaKnown RBP24.15■■□□□ 1.46
PKD2-201ENST00000237596 ZRSR1Q15695 479 aaKnown RBP24.14■■□□□ 1.46
PKD2-201ENST00000237596 RAB3GAP2Q9H2M9 1393 aa24.13■■□□□ 1.45
PKD2-201ENST00000237596 SPAG9O60271 1321 aaKnown RBP24.13■■□□□ 1.45
PKD2-201ENST00000237596 RSPH4AQ5TD94 716 aa24.13■■□□□ 1.45
PKD2-201ENST00000237596 PAK3O75914 559 aaPredicted RBP24.13■■□□□ 1.45
PKD2-201ENST00000237596 ROCK2O75116 1388 aaKnown RBP24.12■■□□□ 1.45
PKD2-201ENST00000237596 RAPGEF2Q9Y4G8 1499 aa24.12■■□□□ 1.45
PKD2-201ENST00000237596 TOP2AP11388 1531 aaKnown RBP24.12■■□□□ 1.45
PKD2-201ENST00000237596 KTN1Q86UP2 1357 aaKnown RBP24.11■■□□□ 1.45
PKD2-201ENST00000237596 FHOD3Q2V2M9 1422 aa24.1■■□□□ 1.45
PKD2-201ENST00000237596 CCER2I3L3R5 266 aa24.1■■□□□ 1.45
PKD2-201ENST00000237596 FGD1P98174 961 aa24.09■■□□□ 1.45
PKD2-201ENST00000237596 KCNJ4P48050 445 aa24.09■■□□□ 1.45
PKD2-201ENST00000237596 GOLGA2Q08379 1002 aa24.08■■□□□ 1.45
PKD2-201ENST00000237596 WASHC2CQ9Y4E1 1318 aa24.08■■□□□ 1.44
PKD2-201ENST00000237596 U2AF1L5P0DN76 240 aaPredicted RBP24.07■■□□□ 1.44
PKD2-201ENST00000237596 U2AF1Q01081 240 aaKnown RBP eCLIP24.07■■□□□ 1.44
PKD2-201ENST00000237596 B4GALNT3Q6L9W6 998 aa24.06■■□□□ 1.44
PKD2-201ENST00000237596 TRIM44Q96DX7 344 aaPredicted RBP24.06■■□□□ 1.44
PKD2-201ENST00000237596 TPRNQ4KMQ1 711 aa24.05■■□□□ 1.44
PKD2-201ENST00000237596 ATAD2BQ9ULI0 1458 aa24.05■■□□□ 1.44
PKD2-201ENST00000237596 WIZO95785 1651 aa24.04■■□□□ 1.44
PKD2-201ENST00000237596 CSB-PGBD3P0DP91 1061 aa24.04■■□□□ 1.44
PKD2-201ENST00000237596 EID1Q9Y6B2 187 aa24.03■■□□□ 1.44
PKD2-201ENST00000237596 CCDC18Q5T9S5 1454 aa24.02■■□□□ 1.44
PKD2-201ENST00000237596 TAOK2Q9UL54 1235 aa24.01■■□□□ 1.43
PKD2-201ENST00000237596 L3MBTL2Q969R5 705 aa24■■□□□ 1.43
PKD2-201ENST00000237596 RALBP1Q15311 655 aa23.99■■□□□ 1.43
PKD2-201ENST00000237596 EIF3AQ14152 1382 aaKnown RBP23.98■■□□□ 1.43
PKD2-201ENST00000237596 IPO8O15397 1037 aaKnown RBP23.98■■□□□ 1.43
PKD2-201ENST00000237596 TERF2IPQ9NYB0 399 aa23.98■■□□□ 1.43
PKD2-201ENST00000237596 CALD1Q05682 793 aaKnown RBP23.97■■□□□ 1.43
PKD2-201ENST00000237596 NUTM2DQ5VT03 806 aaPredicted RBP23.97■■□□□ 1.43
PKD2-201ENST00000237596 NAP1L2Q9ULW6 460 aaPredicted RBP23.96■■□□□ 1.43
PKD2-201ENST00000237596 PTMAP06454 111 aaKnown RBP23.95■■□□□ 1.42
PKD2-201ENST00000237596 HSP90AB1P08238 724 aaKnown RBP23.95■■□□□ 1.42
PKD2-201ENST00000237596 RBM19Q9Y4C8 960 aaKnown RBP23.92■■□□□ 1.42
PKD2-201ENST00000237596 NGDNQ8NEJ9 315 aaKnown RBP23.92■■□□□ 1.42
PKD2-201ENST00000237596 FANCD2Q9BXW9 1451 aa23.91■■□□□ 1.42
PKD2-201ENST00000237596 TULP1O00294 542 aaPredicted RBP23.9■■□□□ 1.42
PKD2-201ENST00000237596 ZNF330Q9Y3S2 320 aaPredicted RBP23.9■■□□□ 1.42
PKD2-201ENST00000237596 PTPRGP23470 1445 aa23.9■■□□□ 1.42
PKD2-201ENST00000237596 CYB5RLQ6IPT4 315 aa23.89■■□□□ 1.42
PKD2-201ENST00000237596 TSHZ2Q9NRE2 1034 aa23.88■■□□□ 1.41
PKD2-201ENST00000237596 APBB1O00213 710 aa23.88■■□□□ 1.41
PKD2-201ENST00000237596 CHMP4AQ9BY43 222 aa23.88■■□□□ 1.41
PKD2-201ENST00000237596 TRAK1Q9UPV9 953 aa23.85■■□□□ 1.41
PKD2-201ENST00000237596 MCCP23508 829 aa23.85■■□□□ 1.41
PKD2-201ENST00000237596 RCAN3Q9UKA8 241 aa23.85■■□□□ 1.41
PKD2-201ENST00000237596 NUTM2FA1L443 756 aa23.84■■□□□ 1.41
PKD2-201ENST00000237596 OSCARQ8IYS5 282 aa23.83■■□□□ 1.41
PKD2-201ENST00000237596 STK31Q9BXU1 1019 aa23.83■■□□□ 1.41
PKD2-201ENST00000237596 HSCBQ8IWL3 235 aa23.82■■□□□ 1.4
PKD2-201ENST00000237596 CCDC9Q9Y3X0 531 aaKnown RBP23.82■■□□□ 1.4
PKD2-201ENST00000237596 CFAP44Q96MT7 982 aa23.82■■□□□ 1.4
PKD2-201ENST00000237596 GLIPR1L2Q4G1C9 344 aa23.82■■□□□ 1.4
PKD2-201ENST00000237596 PLCB2Q00722 1185 aa23.82■■□□□ 1.4
PKD2-201ENST00000237596 ITPRIPQ8IWB1 547 aa23.81■■□□□ 1.4
PKD2-201ENST00000237596 NLRP13Q86W25 1043 aa23.8■■□□□ 1.4
PKD2-201ENST00000237596 RTN4Q9NQC3 1192 aaKnown RBP23.8■■□□□ 1.4
PKD2-201ENST00000237596 AMPHP49418 695 aa23.8■■□□□ 1.4
PKD2-201ENST00000237596 GOLGA6L4A6NEF3 574 aa23.8■■□□□ 1.4
PKD2-201ENST00000237596 SMARCA4P51532 1647 aa23.79■■□□□ 1.4
PKD2-201ENST00000237596 NOP58Q9Y2X3 529 aaKnown RBP23.78■■□□□ 1.4
PKD2-201ENST00000237596 CCDC144AA2RUR9 1427 aa23.78■■□□□ 1.4
PKD2-201ENST00000237596 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.78■■□□□ 1.41e-6■■■■□ 22.9
PKD2-201ENST00000237596 RWDD1Q9H446 243 aaPredicted RBP23.76■■□□□ 1.39
PKD2-201ENST00000237596 DNTTIP2Q5QJE6 756 aaKnown RBP23.76■■□□□ 1.39
PKD2-201ENST00000237596 KIAA1211Q6ZU35 1233 aa23.76■■□□□ 1.39
PKD2-201ENST00000237596 VGFO15240 615 aaPredicted RBP23.75■■□□□ 1.39
PKD2-201ENST00000237596 LTV1Q96GA3 475 aaPredicted RBP23.75■■□□□ 1.39
PKD2-201ENST00000237596 ST20-MTHFSA0A0A6YYL1 179 aa23.74■■□□□ 1.39
PKD2-201ENST00000237596 SMC4Q9NTJ3 1288 aa23.74■■□□□ 1.39
PKD2-201ENST00000237596 ISY1Q9ULR0 285 aaKnown RBP23.73■■□□□ 1.39
PKD2-201ENST00000237596 RUSC2Q8N2Y8 1516 aa23.72■■□□□ 1.39
PKD2-201ENST00000237596 CCDC146Q8IYE0 955 aa23.71■■□□□ 1.39
PKD2-201ENST00000237596 LMOD3Q0VAK6 560 aa23.71■■□□□ 1.39
PKD2-201ENST00000237596 HDAC5Q9UQL6 1122 aa23.71■■□□□ 1.39
PKD2-201ENST00000237596 DEKP35659 375 aaKnown RBP23.7■■□□□ 1.38
PKD2-201ENST00000237596 ERICH6BQ5W0A0 696 aa23.67■■□□□ 1.38
PKD2-201ENST00000237596 UACAQ9BZF9 1416 aa23.67■■□□□ 1.38
PKD2-201ENST00000237596 CLUAP1Q96AJ1 413 aa23.67■■□□□ 1.38
PKD2-201ENST00000237596 GORABQ5T7V8 394 aa23.66■■□□□ 1.38
PKD2-201ENST00000237596 CHMP3Q9Y3E7 222 aa23.66■■□□□ 1.38
PKD2-201ENST00000237596 SLC4A10Q6U841 1118 aa23.66■■□□□ 1.38
PKD2-201ENST00000237596 GAPVD1Q14C86 1478 aa23.65■■□□□ 1.38
PKD2-201ENST00000237596 SPRYD3Q8NCJ5 442 aa23.65■■□□□ 1.38
PKD2-201ENST00000237596 PANK3Q9H999 370 aa23.65■■□□□ 1.38
PKD2-201ENST00000237596 HMMRO75330 724 aa23.65■■□□□ 1.38
PKD2-201ENST00000237596 GOLGA6L6A8MZA4 724 aa23.64■■□□□ 1.38
PKD2-201ENST00000237596 NRDCO43847 1150 aa23.64■■□□□ 1.38
PKD2-201ENST00000237596 TAF7LQ5H9L4 462 aa23.64■■□□□ 1.38
PKD2-201ENST00000237596 TMX4Q9H1E5 349 aaPredicted RBP23.63■■□□□ 1.37
PKD2-201ENST00000237596 PDE3BQ13370 1112 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms