RNA–Protein interactions for RNA: ENST00000237014.7

TTR-201, Transcript of transthyretin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTR, Length 957 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-201ENST00000237014 ZCCHC11Q5TAX3 1644 aaKnown RBP12.17□□□□□ -0.46
TTR-201ENST00000237014 CHADLQ6NUI6 762 aa12.16□□□□□ -0.46
TTR-201ENST00000237014 ASXL2Q76L83 1435 aa12.14□□□□□ -0.47
TTR-201ENST00000237014 NPM1P06748 294 aaKnown RBP eCLIP12.14□□□□□ -0.47
TTR-201ENST00000237014 PRR29P0C7W0 189 aa12.13□□□□□ -0.47
TTR-201ENST00000237014 P3H3Q8IVL6 736 aa12.12□□□□□ -0.47
TTR-201ENST00000237014 FHOD3Q2V2M9 1422 aa12.11□□□□□ -0.47
TTR-201ENST00000237014 EFCAB5A4FU69 1503 aa12.11□□□□□ -0.47
TTR-201ENST00000237014 FAM69CQ0P6D2 419 aa12.1□□□□□ -0.47
TTR-201ENST00000237014 EHMT2Q96KQ7 1210 aa12.1□□□□□ -0.47
TTR-201ENST00000237014 GLI2P10070 1586 aa12.09□□□□□ -0.47
TTR-201ENST00000237014 RAPGEF6Q8TEU7 1601 aa12.09□□□□□ -0.47
TTR-201ENST00000237014 CLCN6P51797 869 aa12.09□□□□□ -0.47
TTR-201ENST00000237014 PPRC1Q5VV67 1664 aaKnown RBP12.09□□□□□ -0.47
TTR-201ENST00000237014 EPRSP07814 1512 aaKnown RBP12.08□□□□□ -0.48
TTR-201ENST00000237014 RANGAP1P46060 587 aaPredicted RBP12.08□□□□□ -0.48
TTR-201ENST00000237014 TSPOAP1O95153 1857 aa12.08□□□□□ -0.48
TTR-201ENST00000237014 WDR7Q9Y4E6 1490 aa12.08□□□□□ -0.48
TTR-201ENST00000237014 ARHGAP35Q9NRY4 1499 aa12.07□□□□□ -0.48
TTR-201ENST00000237014 MAP3K4Q9Y6R4 1608 aa12.06□□□□□ -0.48
TTR-201ENST00000237014 ATP10BO94823 1461 aa12.06□□□□□ -0.48
TTR-201ENST00000237014 NUP153P49790 1475 aaKnown RBP12.06□□□□□ -0.48
TTR-201ENST00000237014 UBTFP17480 764 aaKnown RBP12.05□□□□□ -0.48
TTR-201ENST00000237014 POTEIP0CG38 1075 aa12.04□□□□□ -0.48
TTR-201ENST00000237014 ARID3CA6NKF2 412 aa12.02□□□□□ -0.49
TTR-201ENST00000237014 CD44P16070 742 aaKnown RBP12.02□□□□□ -0.49
TTR-201ENST00000237014 FARP1Q9Y4F1 1045 aaPredicted RBP12.01□□□□□ -0.49
TTR-201ENST00000237014 KDM6BO15054 1643 aa11.99□□□□□ -0.49
TTR-201ENST00000237014 CFAP43Q8NDM7 1665 aa11.99□□□□□ -0.49
TTR-201ENST00000237014 CDK13Q14004 1512 aaKnown RBP11.97□□□□□ -0.49
TTR-201ENST00000237014 LRRIQ1Q96JM4 1722 aa11.97□□□□□ -0.49
TTR-201ENST00000237014 ABCA9Q8IUA7 1624 aa11.97□□□□□ -0.49
TTR-201ENST00000237014 FMN1Q68DA7 1419 aa11.96□□□□□ -0.49
TTR-201ENST00000237014 HECW1Q76N89 1606 aa11.96□□□□□ -0.5
TTR-201ENST00000237014 COL17A1Q9UMD9 1497 aaPredicted RBP11.95□□□□□ -0.5
TTR-201ENST00000237014 PCF11O94913 1555 aaKnown RBP11.95□□□□□ -0.5
TTR-201ENST00000237014 MAGI3Q5TCQ9 1506 aa11.95□□□□□ -0.5
TTR-201ENST00000237014 KCNH8Q96L42 1107 aa11.94□□□□□ -0.5
TTR-201ENST00000237014 TEX14Q8IWB6 1497 aa11.94□□□□□ -0.5
TTR-201ENST00000237014 CD109Q6YHK3 1445 aa11.94□□□□□ -0.5
TTR-201ENST00000237014 CLIP1P30622 1438 aa11.93□□□□□ -0.5
TTR-201ENST00000237014 TTC37Q6PGP7 1564 aa11.91□□□□□ -0.5
TTR-201ENST00000237014 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.9□□□□□ -0.5
TTR-201ENST00000237014 CASKIN1Q8WXD9 1431 aa11.89□□□□□ -0.51
TTR-201ENST00000237014 CEP162Q5TB80 1403 aa11.87□□□□□ -0.51
TTR-201ENST00000237014 KIF14Q15058 1648 aa11.87□□□□□ -0.51
TTR-201ENST00000237014 ZNF579Q8NAF0 562 aaKnown RBP11.87□□□□□ -0.51
TTR-201ENST00000237014 FYCO1Q9BQS8 1478 aa11.87□□□□□ -0.51
TTR-201ENST00000237014 PLEKHD1A6NEE1 506 aa11.85□□□□□ -0.51
TTR-201ENST00000237014 ARAP3Q8WWN8 1544 aa11.85□□□□□ -0.51
TTR-201ENST00000237014 DCBLD2Q96PD2 775 aa11.84□□□□□ -0.51
TTR-201ENST00000237014 TROQ12816 1431 aaPredicted RBP11.84□□□□□ -0.51
TTR-201ENST00000237014 FRMPD1Q5SYB0 1578 aa11.84□□□□□ -0.51
TTR-201ENST00000237014 CCDC18Q5T9S5 1454 aa11.83□□□□□ -0.52
TTR-201ENST00000237014 NEO1Q92859 1461 aa11.83□□□□□ -0.52
TTR-201ENST00000237014 LOC105371045A0A1W2PR82 267 aa11.83□□□□□ -0.52
TTR-201ENST00000237014 ATP1B4Q9UN42 357 aaPredicted RBP11.83□□□□□ -0.52
TTR-201ENST00000237014 MYO5CQ9NQX4 1742 aa11.8□□□□□ -0.52
TTR-201ENST00000237014 FANCAO15360 1455 aa11.8□□□□□ -0.52
TTR-201ENST00000237014 CFAP74Q9C0B2 1584 aa11.79□□□□□ -0.52
TTR-201ENST00000237014 RICTORQ6R327 1708 aa11.79□□□□□ -0.52
TTR-201ENST00000237014 PHLDB1Q86UU1 1377 aa11.79□□□□□ -0.52
TTR-201ENST00000237014 PLCH2O75038 1416 aa11.78□□□□□ -0.52
TTR-201ENST00000237014 ZRANB1Q9UGI0 708 aa11.77□□□□□ -0.53
TTR-201ENST00000237014 CDC42BPBQ9Y5S2 1711 aa11.77□□□□□ -0.53
TTR-201ENST00000237014 AKNAQ7Z591 1439 aa11.77□□□□□ -0.53
TTR-201ENST00000237014 PREX2Q70Z35 1606 aa11.76□□□□□ -0.53
TTR-201ENST00000237014 CREBZFQ9NS37 354 aa11.76□□□□□ -0.53
TTR-201ENST00000237014 CDK11AQ9UQ88 783 aaPredicted RBP11.76□□□□□ -0.53
TTR-201ENST00000237014 CDC42BPAQ5VT25 1732 aa11.75□□□□□ -0.53
TTR-201ENST00000237014 RAPGEF3O95398 923 aa11.75□□□□□ -0.53
TTR-201ENST00000237014 KDM4FA0A1W2PPD8 638 aa11.74□□□□□ -0.53
TTR-201ENST00000237014 STAG3Q9UJ98 1225 aa11.74□□□□□ -0.53
TTR-201ENST00000237014 DENND4BO75064 1496 aaPredicted RBP11.74□□□□□ -0.53
TTR-201ENST00000237014 ADGRL1O94910 1474 aa11.74□□□□□ -0.53
TTR-201ENST00000237014 ZMYM4Q5VZL5 1548 aa11.74□□□□□ -0.53
TTR-201ENST00000237014 ARHGAP5Q13017 1502 aa11.73□□□□□ -0.53
TTR-201ENST00000237014 VPS8Q8N3P4 1428 aa11.73□□□□□ -0.53
TTR-201ENST00000237014 ARHGEF40Q8TER5 1519 aa11.73□□□□□ -0.53
TTR-201ENST00000237014 POGZQ7Z3K3 1410 aa11.72□□□□□ -0.53
TTR-201ENST00000237014 EHBP1L1Q8N3D4 1523 aa11.71□□□□□ -0.53
TTR-201ENST00000237014 SIGLEC1Q9BZZ2 1709 aa11.71□□□□□ -0.54
TTR-201ENST00000237014 TIAM1Q13009 1591 aa11.71□□□□□ -0.54
TTR-201ENST00000237014 ABCC1P33527 1531 aa11.7□□□□□ -0.54
TTR-201ENST00000237014 SCAPERQ9BY12 1400 aa11.7□□□□□ -0.54
TTR-201ENST00000237014 PLSCR2Q9NRY7 297 aa11.7□□□□□ -0.54
TTR-201ENST00000237014 GPATCH8Q9UKJ3 1502 aaKnown RBP11.7□□□□□ -0.54
TTR-201ENST00000237014 GALR2O43603 387 aaPredicted RBP11.69□□□□□ -0.54
TTR-201ENST00000237014 KDM5CP41229 1560 aa11.69□□□□□ -0.54
TTR-201ENST00000237014 SAMD9LQ8IVG5 1584 aa11.69□□□□□ -0.54
TTR-201ENST00000237014 ARHGEF12Q9NZN5 1544 aa11.69□□□□□ -0.54
TTR-201ENST00000237014 YEATS2Q9ULM3 1422 aa11.69□□□□□ -0.54
TTR-201ENST00000237014 ITSN2Q9NZM3 1697 aa11.68□□□□□ -0.54
TTR-201ENST00000237014 MTUS2Q5JR59 1369 aa11.68□□□□□ -0.54
TTR-201ENST00000237014 EFCAB2Q5VUJ9 269 aa11.68□□□□□ -0.54
TTR-201ENST00000237014 OTUD5Q96G74 571 aa11.68□□□□□ -0.54
TTR-201ENST00000237014 ZFYVE16Q7Z3T8 1539 aa11.67□□□□□ -0.54
TTR-201ENST00000237014 ZNF518AQ6AHZ1 1483 aa11.65□□□□□ -0.54
TTR-201ENST00000237014 MAGI2Q86UL8 1455 aa11.65□□□□□ -0.54
TTR-201ENST00000237014 TRAPPC8Q9Y2L5 1435 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms