RNA–Protein interactions for RNA: ENST00000233838.8

GGCX-201, Transcript of gamma-glutamyl carboxylase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGCX, Length 7,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-201ENST00000233838 SAFB2Q14151 953 aaKnown RBP eCLIP10.13□□□□□ -0.79
GGCX-201ENST00000233838 TMF1P82094 1093 aa10.13□□□□□ -0.79
GGCX-201ENST00000233838 MLECQ14165 292 aa10.12□□□□□ -0.79
GGCX-201ENST00000233838 SIN3AQ96ST3 1273 aa10.12□□□□□ -0.79
GGCX-201ENST00000233838 PDE4CQ08493 712 aa10.12□□□□□ -0.79
GGCX-201ENST00000233838 ZNF330Q9Y3S2 320 aaPredicted RBP10.11□□□□□ -0.79
GGCX-201ENST00000233838 MORC1Q86VD1 984 aa10.11□□□□□ -0.79
GGCX-201ENST00000233838 KIAA1211Q6ZU35 1233 aa10.11□□□□□ -0.79
GGCX-201ENST00000233838 KANK1Q14678 1352 aa10.1□□□□□ -0.79
GGCX-201ENST00000233838 HSP90B1P14625 803 aaKnown RBP10.1□□□□□ -0.79
GGCX-201ENST00000233838 DCAF11Q8TEB1 546 aa10.1□□□□□ -0.79
GGCX-201ENST00000233838 EIF4G1Q04637 1599 aaKnown RBP10.09□□□□□ -0.79
GGCX-201ENST00000233838 PAK3O75914 559 aaPredicted RBP10.09□□□□□ -0.79
GGCX-201ENST00000233838 DEKP35659 375 aaKnown RBP10.08□□□□□ -0.8
GGCX-201ENST00000233838 CFAP44Q96MT7 982 aa10.08□□□□□ -0.8
GGCX-201ENST00000233838 TRHP20396 242 aaPredicted RBP10.08□□□□□ -0.8
GGCX-201ENST00000233838 GZF1Q9H116 711 aaPredicted RBP10.08□□□□□ -0.8
GGCX-201ENST00000233838 A0A0U1RQG5 324 aaPredicted RBP10.07□□□□□ -0.8
GGCX-201ENST00000233838 STK26Q9P289 416 aa10.07□□□□□ -0.8
GGCX-201ENST00000233838 KIF27Q86VH2 1401 aa10.07□□□□□ -0.8
GGCX-201ENST00000233838 TMX4Q9H1E5 349 aaPredicted RBP10.07□□□□□ -0.8
GGCX-201ENST00000233838 TPM4P67936 248 aa10.07□□□□□ -0.8
GGCX-201ENST00000233838 ERCC6Q03468 1493 aa10.06□□□□□ -0.8
GGCX-201ENST00000233838 HDGFP51858 240 aaKnown RBP10.06□□□□□ -0.8
GGCX-201ENST00000233838 ITPRIPQ8IWB1 547 aa10.06□□□□□ -0.8
GGCX-201ENST00000233838 CSB-PGBD3P0DP91 1061 aa10.06□□□□□ -0.8
GGCX-201ENST00000233838 CHMP3Q9Y3E7 222 aa10.06□□□□□ -0.8
GGCX-201ENST00000233838 CECR2Q9BXF3 1484 aa10.05□□□□□ -0.8
GGCX-201ENST00000233838 PTMSP20962 102 aa10.05□□□□□ -0.8
GGCX-201ENST00000233838 CREBRFQ8IUR6 639 aa10.05□□□□□ -0.8
GGCX-201ENST00000233838 GBP4Q96PP9 640 aa10.05□□□□□ -0.8
GGCX-201ENST00000233838 ANO8Q9HCE9 1232 aaPredicted RBP10.05□□□□□ -0.8
GGCX-201ENST00000233838 CCNB3Q8WWL7 1395 aa10.05□□□□□ -0.8
GGCX-201ENST00000233838 HDGFL2Q7Z4V5 671 aaPredicted RBP10.04□□□□□ -0.8
GGCX-201ENST00000233838 HTATSF1O43719 755 aaKnown RBP10.04□□□□□ -0.8
GGCX-201ENST00000233838 GORABQ5T7V8 394 aa10.04□□□□□ -0.8
GGCX-201ENST00000233838 IPO8O15397 1037 aaKnown RBP10.03□□□□□ -0.8
GGCX-201ENST00000233838 TAF7LQ5H9L4 462 aa10.03□□□□□ -0.8
GGCX-201ENST00000233838 CCDC9Q9Y3X0 531 aaKnown RBP10.03□□□□□ -0.8
GGCX-201ENST00000233838 G3V3G9 751 aa10.03□□□□□ -0.8
GGCX-201ENST00000233838 DCAF8Q5TAQ9 597 aa10.03□□□□□ -0.8
GGCX-201ENST00000233838 TRIM6-TRIM34B2RNG4 842 aa10.02□□□□□ -0.81
GGCX-201ENST00000233838 GOLGA6L1Q8N7Z2 621 aa10.02□□□□□ -0.81
GGCX-201ENST00000233838 RASSF8Q8NHQ8 419 aa10.02□□□□□ -0.81
GGCX-201ENST00000233838 GPATCH3Q96I76 525 aa10.02□□□□□ -0.81
GGCX-201ENST00000233838 MROH2BQ7Z745 1585 aa10.02□□□□□ -0.81
GGCX-201ENST00000233838 SYAP1Q96A49 352 aaPredicted RBP10.02□□□□□ -0.81
GGCX-201ENST00000233838 SLKQ9H2G2 1235 aaPredicted RBP10.01□□□□□ -0.81
GGCX-201ENST00000233838 KTN1Q86UP2 1357 aaKnown RBP10.01□□□□□ -0.81
GGCX-201ENST00000233838 NOL8Q76FK4 1167 aaKnown RBP10.01□□□□□ -0.81
GGCX-201ENST00000233838 TNNT3P45378 269 aaPredicted RBP10.01□□□□□ -0.81
GGCX-201ENST00000233838 MFAP1P55081 439 aaKnown RBP10.01□□□□□ -0.81
GGCX-201ENST00000233838 VPS53Q5VIR6 699 aa10□□□□□ -0.81
GGCX-201ENST00000233838 FOXD4L1Q9NU39 408 aa10□□□□□ -0.81
GGCX-201ENST00000233838 ZBTB4Q9P1Z0 1013 aaPredicted RBP10□□□□□ -0.81
GGCX-201ENST00000233838 TOP2AP11388 1531 aaKnown RBP9.99□□□□□ -0.81
GGCX-201ENST00000233838 RWDD1Q9H446 243 aaPredicted RBP9.99□□□□□ -0.81
GGCX-201ENST00000233838 CALD1Q05682 793 aaKnown RBP9.99□□□□□ -0.81
GGCX-201ENST00000233838 U2AF1L5P0DN76 240 aaPredicted RBP9.98□□□□□ -0.81
GGCX-201ENST00000233838 U2AF1Q01081 240 aaKnown RBP eCLIP9.98□□□□□ -0.81
GGCX-201ENST00000233838 CCDC88BA6NC98 1476 aa9.98□□□□□ -0.81
GGCX-201ENST00000233838 HSPA5P11021 654 aaKnown RBP9.98□□□□□ -0.81
GGCX-201ENST00000233838 WIZO95785 1651 aa9.98□□□□□ -0.81
GGCX-201ENST00000233838 GGT6Q6P531 493 aa9.97□□□□□ -0.81
GGCX-201ENST00000233838 ROCK2O75116 1388 aaKnown RBP9.97□□□□□ -0.81
GGCX-201ENST00000233838 SPAG9O60271 1321 aaKnown RBP9.97□□□□□ -0.81
GGCX-201ENST00000233838 SMARCA2P51531 1590 aa9.97□□□□□ -0.81
GGCX-201ENST00000233838 CSPP1Q1MSJ5 1256 aa9.97□□□□□ -0.81
GGCX-201ENST00000233838 RBM19Q9Y4C8 960 aaKnown RBP9.96□□□□□ -0.81
GGCX-201ENST00000233838 PMFBP1Q8TBY8 1022 aa9.96□□□□□ -0.81
GGCX-201ENST00000233838 GOLGA6L3A6NEY3 463 aa9.96□□□□□ -0.81
GGCX-201ENST00000233838 SLC4A10Q6U841 1118 aa9.96□□□□□ -0.81
GGCX-201ENST00000233838 CEP89Q96ST8 783 aa9.96□□□□□ -0.81
GGCX-201ENST00000233838 STK31Q9BXU1 1019 aa9.96□□□□□ -0.81
GGCX-201ENST00000233838 MARCH6O60337 910 aa9.96□□□□□ -0.82
GGCX-201ENST00000233838 FOXD4L5Q5VV16 416 aaPredicted RBP9.96□□□□□ -0.82
GGCX-201ENST00000233838 FOXD4L4Q8WXT5 416 aaPredicted RBP9.96□□□□□ -0.82
GGCX-201ENST00000233838 TOMM22Q9NS69 142 aa9.96□□□□□ -0.82
GGCX-201ENST00000233838 RCAN3Q9UKA8 241 aa9.96□□□□□ -0.82
GGCX-201ENST00000233838 ABCC8Q09428 1581 aa9.96□□□□□ -0.82
GGCX-201ENST00000233838 CCDC34Q96HJ3 373 aa9.95□□□□□ -0.82
GGCX-201ENST00000233838 SOGA1O94964 1423 aa9.95□□□□□ -0.82
GGCX-201ENST00000233838 FOXD1Q16676 465 aa9.95□□□□□ -0.82
GGCX-201ENST00000233838 FHAD1B1AJZ9 1412 aa9.95□□□□□ -0.82
GGCX-201ENST00000233838 SMC4Q9NTJ3 1288 aa9.95□□□□□ -0.82
GGCX-201ENST00000233838 PES1O00541 588 aaKnown RBP9.94□□□□□ -0.82
GGCX-201ENST00000233838 TPM3P06753 285 aa9.94□□□□□ -0.82
GGCX-201ENST00000233838 FRAT2O75474 233 aaPredicted RBP9.94□□□□□ -0.82
GGCX-201ENST00000233838 CCDC146Q8IYE0 955 aa9.93□□□□□ -0.82
GGCX-201ENST00000233838 TPD52L1Q16890 204 aaPredicted RBP9.93□□□□□ -0.82
GGCX-201ENST00000233838 FBXO3Q9UK99 471 aa9.93□□□□□ -0.82
GGCX-201ENST00000233838 VPS8Q8N3P4 1428 aa9.92□□□□□ -0.82
GGCX-201ENST00000233838 CCER2I3L3R5 266 aa9.92□□□□□ -0.82
GGCX-201ENST00000233838 ARHGAP35Q9NRY4 1499 aa9.92□□□□□ -0.82
GGCX-201ENST00000233838 HMMRO75330 724 aa9.92□□□□□ -0.82
GGCX-201ENST00000233838 KIF16BQ96L93 1317 aa9.92□□□□□ -0.82
GGCX-201ENST00000233838 WWC1Q8IX03 1113 aa9.91□□□□□ -0.82
GGCX-201ENST00000233838 PKD2Q13563 968 aa9.91□□□□□ -0.82
GGCX-201ENST00000233838 PHF14O94880 888 aa9.91□□□□□ -0.82
GGCX-201ENST00000233838 SF3A1Q15459 793 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms