RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 DIEXFQ68CQ4 756 aaKnown RBP23.36■■□□□ 1.33
ITGA4-201ENST00000233573 CFDP1Q9UEE9 299 aaPredicted RBP23.36■■□□□ 1.33
ITGA4-201ENST00000233573 CAMSAP2Q08AD1 1489 aa23.34■■□□□ 1.33
ITGA4-201ENST00000233573 CHIC2Q9UKJ5 165 aa23.33■■□□□ 1.33
ITGA4-201ENST00000233573 ZNF777Q9ULD5 760 aaPredicted RBP23.33■■□□□ 1.33
ITGA4-201ENST00000233573 TTC37Q6PGP7 1564 aa23.33■■□□□ 1.33
ITGA4-201ENST00000233573 DAPK1P53355 1430 aa23.33■■□□□ 1.32
ITGA4-201ENST00000233573 KCNH8Q96L42 1107 aa23.31■■□□□ 1.32
ITGA4-201ENST00000233573 ABCC5O15440 1437 aa23.31■■□□□ 1.32
ITGA4-201ENST00000233573 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.3■■□□□ 1.32
ITGA4-201ENST00000233573 KDM6BO15054 1643 aa23.28■■□□□ 1.32
ITGA4-201ENST00000233573 ROCK1Q13464 1354 aa23.28■■□□□ 1.32
ITGA4-201ENST00000233573 RRP7BPQ9NSQ0 103 aa23.28■■□□□ 1.32
ITGA4-201ENST00000233573 CDC42BPBQ9Y5S2 1711 aa23.27■■□□□ 1.32
ITGA4-201ENST00000233573 PREX2Q70Z35 1606 aa23.27■■□□□ 1.32
ITGA4-201ENST00000233573 SIN3AQ96ST3 1273 aa23.25■■□□□ 1.31
ITGA4-201ENST00000233573 TIMELESSQ9UNS1 1208 aa23.22■■□□□ 1.31
ITGA4-201ENST00000233573 CROCC2H7BZ55 1655 aa23.21■■□□□ 1.31
ITGA4-201ENST00000233573 MYO5CQ9NQX4 1742 aa23.21■■□□□ 1.31
ITGA4-201ENST00000233573 SAMD9LQ8IVG5 1584 aa23.2■■□□□ 1.3
ITGA4-201ENST00000233573 DENND4BO75064 1496 aaPredicted RBP23.2■■□□□ 1.3
ITGA4-201ENST00000233573 WDR7Q9Y4E6 1490 aa23.2■■□□□ 1.3
ITGA4-201ENST00000233573 ARHGAP5Q13017 1502 aa23.18■■□□□ 1.3
ITGA4-201ENST00000233573 ADGBQ8N7X0 1667 aa23.17■■□□□ 1.3
ITGA4-201ENST00000233573 ASXL2Q76L83 1435 aa23.16■■□□□ 1.3
ITGA4-201ENST00000233573 RIMBP3CA6NJZ7 1639 aa23.16■■□□□ 1.3
ITGA4-201ENST00000233573 RIMBP3BA6NNM3 1639 aa23.16■■□□□ 1.3
ITGA4-201ENST00000233573 RIMBP3Q9UFD9 1639 aa23.16■■□□□ 1.3
ITGA4-201ENST00000233573 NEUROD1Q13562 356 aa23.16■■□□□ 1.3
ITGA4-201ENST00000233573 ADGRL2O95490 1459 aa23.15■■□□□ 1.3
ITGA4-201ENST00000233573 HNRNPMP52272 730 aaKnown RBP eCLIP23.14■■□□□ 1.29
ITGA4-201ENST00000233573 NCOA1Q15788 1441 aa23.11■■□□□ 1.29
ITGA4-201ENST00000233573 MBD5Q9P267 1494 aa23.11■■□□□ 1.29
ITGA4-201ENST00000233573 ACIN1Q9UKV3 1341 aaKnown RBP23.11■■□□□ 1.29
ITGA4-201ENST00000233573 SYCP2Q9BX26 1530 aa23.1■■□□□ 1.29
ITGA4-201ENST00000233573 PLCH2O75038 1416 aa23.1■■□□□ 1.29
ITGA4-201ENST00000233573 NPM1P06748 294 aaKnown RBP eCLIP23.1■■□□□ 1.29
ITGA4-201ENST00000233573 CYB5RLQ6IPT4 315 aa23.09■■□□□ 1.29
ITGA4-201ENST00000233573 ARHGEF5Q12774 1597 aa23.09■■□□□ 1.29
ITGA4-201ENST00000233573 SHANK2Q9UPX8 1470 aa23.08■■□□□ 1.29
ITGA4-201ENST00000233573 PPP1R15AO75807 674 aaPredicted RBP23.07■■□□□ 1.28
ITGA4-201ENST00000233573 C9orf84Q5VXU9 1444 aa23.06■■□□□ 1.28
ITGA4-201ENST00000233573 ABCA9Q8IUA7 1624 aa23.06■■□□□ 1.28
ITGA4-201ENST00000233573 TRIM52Q96A61 297 aa23.05■■□□□ 1.28
ITGA4-201ENST00000233573 MPHOSPH9Q99550 1183 aa23.05■■□□□ 1.28
ITGA4-201ENST00000233573 CCDC141Q6ZP82 1450 aa23.04■■□□□ 1.28
ITGA4-201ENST00000233573 ARHGEF12Q9NZN5 1544 aa23.03■■□□□ 1.28
ITGA4-201ENST00000233573 TONSLQ96HA7 1378 aa23.01■■□□□ 1.27
ITGA4-201ENST00000233573 ANKRD30AQ9BXX3 1397 aa23.01■■□□□ 1.27
ITGA4-201ENST00000233573 TSPY4P0CV99 314 aa23.01■■□□□ 1.27
ITGA4-201ENST00000233573 TSPY10P0CW01 314 aa23.01■■□□□ 1.27
ITGA4-201ENST00000233573 EFCAB2Q5VUJ9 269 aa23.01■■□□□ 1.27
ITGA4-201ENST00000233573 ABCC1P33527 1531 aa22.99■■□□□ 1.27
ITGA4-201ENST00000233573 PLEKHH2Q8IVE3 1493 aa22.99■■□□□ 1.27
ITGA4-201ENST00000233573 ARAP3Q8WWN8 1544 aa22.98■■□□□ 1.27
ITGA4-201ENST00000233573 KIAA1107Q9UPP5 1409 aa22.98■■□□□ 1.27
ITGA4-201ENST00000233573 PZPP20742 1482 aa22.97■■□□□ 1.27
ITGA4-201ENST00000233573 MIER1Q8N108 512 aa22.96■■□□□ 1.27
ITGA4-201ENST00000233573 FANCAO15360 1455 aa22.95■■□□□ 1.26
ITGA4-201ENST00000233573 ANKRD30BQ9BXX2 1392 aa22.94■■□□□ 1.26
ITGA4-201ENST00000233573 ANKRD50Q9ULJ7 1429 aa22.94■■□□□ 1.26
ITGA4-201ENST00000233573 KIF15Q9NS87 1388 aa22.93■■□□□ 1.26
ITGA4-201ENST00000233573 RSPH4AQ5TD94 716 aa22.93■■□□□ 1.26
ITGA4-201ENST00000233573 TRAPPC8Q9Y2L5 1435 aa22.93■■□□□ 1.26
ITGA4-201ENST00000233573 MAST1Q9Y2H9 1570 aa22.92■■□□□ 1.26
ITGA4-201ENST00000233573 FOXD1Q16676 465 aa22.89■■□□□ 1.25
ITGA4-201ENST00000233573 RPRD2Q5VT52 1461 aaKnown RBP22.88■■□□□ 1.25
ITGA4-201ENST00000233573 CD109Q6YHK3 1445 aa22.88■■□□□ 1.25
ITGA4-201ENST00000233573 SLC4A1APQ9BWU0 796 aaKnown RBP22.88■■□□□ 1.25
ITGA4-201ENST00000233573 KDM5DQ9BY66 1539 aa22.87■■□□□ 1.25
ITGA4-201ENST00000233573 AFAP1Q8N556 730 aa22.86■■□□□ 1.25
ITGA4-201ENST00000233573 ADGRL1O94910 1474 aa22.86■■□□□ 1.25
ITGA4-201ENST00000233573 PLXNC1O60486 1568 aa22.85■■□□□ 1.25
ITGA4-201ENST00000233573 SCAPERQ9BY12 1400 aa22.83■■□□□ 1.24
ITGA4-201ENST00000233573 TEX14Q8IWB6 1497 aa22.81■■□□□ 1.24
ITGA4-201ENST00000233573 ZFYVE16Q7Z3T8 1539 aa22.79■■□□□ 1.24
ITGA4-201ENST00000233573 SPAG9O60271 1321 aaKnown RBP22.79■■□□□ 1.24
ITGA4-201ENST00000233573 L3MBTL2Q969R5 705 aa22.77■■□□□ 1.24
ITGA4-201ENST00000233573 NUP155O75694 1391 aa22.76■■□□□ 1.23
ITGA4-201ENST00000233573 CFAP74Q9C0B2 1584 aa22.76■■□□□ 1.23
ITGA4-201ENST00000233573 MAP3K4Q9Y6R4 1608 aa22.76■■□□□ 1.23
ITGA4-201ENST00000233573 DUOX2Q9NRD8 1548 aa22.75■■□□□ 1.23
ITGA4-201ENST00000233573 INO80Q9ULG1 1556 aaPredicted RBP22.75■■□□□ 1.23
ITGA4-201ENST00000233573 PKD2Q13563 968 aa22.74■■□□□ 1.23
ITGA4-201ENST00000233573 ATP7AQ04656 1500 aa22.74■■□□□ 1.23
ITGA4-201ENST00000233573 DIP2BQ9P265 1576 aa22.74■■□□□ 1.23
ITGA4-201ENST00000233573 RTEL1-TNFRSF6BF6WH68 1400 aa22.72■■□□□ 1.23
ITGA4-201ENST00000233573 UNC13BO14795 1591 aa22.72■■□□□ 1.23
ITGA4-201ENST00000233573 GLI2P10070 1586 aa22.72■■□□□ 1.23
ITGA4-201ENST00000233573 FAM69CQ0P6D2 419 aa22.7■■□□□ 1.23
ITGA4-201ENST00000233573 HIRIP3Q9BW71 556 aaPredicted RBP22.7■■□□□ 1.22
ITGA4-201ENST00000233573 MYT1LQ9UL68 1186 aa22.69■■□□□ 1.22
ITGA4-201ENST00000233573 ERBINQ96RT1 1412 aa22.69■■□□□ 1.22
ITGA4-201ENST00000233573 FAM135AQ9P2D6 1515 aa22.69■■□□□ 1.22
ITGA4-201ENST00000233573 ZNF518AQ6AHZ1 1483 aa22.69■■□□□ 1.22
ITGA4-201ENST00000233573 POGZQ7Z3K3 1410 aa22.68■■□□□ 1.22
ITGA4-201ENST00000233573 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.67■■□□□ 1.22
ITGA4-201ENST00000233573 NEO1Q92859 1461 aa22.67■■□□□ 1.22
ITGA4-201ENST00000233573 KIDINS220Q9ULH0 1771 aa22.67■■□□□ 1.22
ITGA4-201ENST00000233573 CENPBP07199 599 aaPredicted RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms