RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 NCOA2Q15596 1464 aa24.51■■□□□ 1.51
CDKN1B-201ENST00000228872 FAM50AQ14320 339 aaKnown RBP24.51■■□□□ 1.51
CDKN1B-201ENST00000228872 DEKP35659 375 aaKnown RBP24.5■■□□□ 1.51
CDKN1B-201ENST00000228872 ERICH6BQ5W0A0 696 aa24.5■■□□□ 1.51
CDKN1B-201ENST00000228872 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.47■■□□□ 1.51
CDKN1B-201ENST00000228872 PTPRGP23470 1445 aa24.47■■□□□ 1.51
CDKN1B-201ENST00000228872 ERCC6L2Q5T890 1561 aa24.46■■□□□ 1.51
CDKN1B-201ENST00000228872 PPP4R2Q9NY27 417 aa24.45■■□□□ 1.5
CDKN1B-201ENST00000228872 FGD6Q6ZV73 1430 aa24.44■■□□□ 1.5
CDKN1B-201ENST00000228872 MYOM3Q5VTT5 1437 aa24.43■■□□□ 1.5
CDKN1B-201ENST00000228872 TONSLQ96HA7 1378 aa24.42■■□□□ 1.5
CDKN1B-201ENST00000228872 PRKCSHP14314 528 aaPredicted RBP24.4■■□□□ 1.5
CDKN1B-201ENST00000228872 ADCY10Q96PN6 1610 aa24.4■■□□□ 1.5
CDKN1B-201ENST00000228872 ARID3CA6NKF2 412 aa24.38■■□□□ 1.49
CDKN1B-201ENST00000228872 TROQ12816 1431 aaPredicted RBP24.36■■□□□ 1.49
CDKN1B-201ENST00000228872 ATP10BO94823 1461 aa24.36■■□□□ 1.49
CDKN1B-201ENST00000228872 UACAQ9BZF9 1416 aa24.36■■□□□ 1.49
CDKN1B-201ENST00000228872 PTPN23Q9H3S7 1636 aa24.34■■□□□ 1.49
CDKN1B-201ENST00000228872 TCOF1Q13428 1488 aaKnown RBP24.32■■□□□ 1.48
CDKN1B-201ENST00000228872 ABCC2Q92887 1545 aa24.32■■□□□ 1.48
CDKN1B-201ENST00000228872 MIA2Q96PC5 1412 aa24.31■■□□□ 1.48
CDKN1B-201ENST00000228872 NOP58Q9Y2X3 529 aaKnown RBP24.3■■□□□ 1.48
CDKN1B-201ENST00000228872 B4GALNT3Q6L9W6 998 aa24.28■■□□□ 1.48
CDKN1B-201ENST00000228872 UHRF1BP1LA0JNW5 1464 aa24.27■■□□□ 1.48
CDKN1B-201ENST00000228872 KIF14Q15058 1648 aa24.27■■□□□ 1.48
CDKN1B-201ENST00000228872 ITSN2Q9NZM3 1697 aa24.27■■□□□ 1.48
CDKN1B-201ENST00000228872 OSCARQ8IYS5 282 aa24.26■■□□□ 1.47
CDKN1B-201ENST00000228872 KDM5BQ9UGL1 1544 aa24.22■■□□□ 1.47
CDKN1B-201ENST00000228872 WASHC2AQ641Q2 1341 aa24.22■■□□□ 1.47
CDKN1B-201ENST00000228872 PLEKHD1A6NEE1 506 aa24.22■■□□□ 1.47
CDKN1B-201ENST00000228872 NBR1Q14596 966 aa24.22■■□□□ 1.47
CDKN1B-201ENST00000228872 PAK3O75914 559 aaPredicted RBP24.21■■□□□ 1.47
CDKN1B-201ENST00000228872 PTPRKQ15262 1439 aa24.21■■□□□ 1.47
CDKN1B-201ENST00000228872 CCDC184Q52MB2 194 aa24.19■■□□□ 1.46
CDKN1B-201ENST00000228872 ZCCHC11Q5TAX3 1644 aaKnown RBP24.18■■□□□ 1.46
CDKN1B-201ENST00000228872 ABCC10Q5T3U5 1492 aa24.18■■□□□ 1.46
CDKN1B-201ENST00000228872 CDC42BPAQ5VT25 1732 aa24.17■■□□□ 1.46
CDKN1B-201ENST00000228872 GPATCH8Q9UKJ3 1502 aaKnown RBP24.16■■□□□ 1.46
CDKN1B-201ENST00000228872 HSPA5P11021 654 aaKnown RBP24.16■■□□□ 1.46
CDKN1B-201ENST00000228872 HFM1A2PYH4 1435 aa24.15■■□□□ 1.46
CDKN1B-201ENST00000228872 ZBED9Q6R2W3 1325 aa24.14■■□□□ 1.46
CDKN1B-201ENST00000228872 CNTLNQ9NXG0 1405 aa24.14■■□□□ 1.45
CDKN1B-201ENST00000228872 DNMT1P26358 1616 aaKnown RBP24.11■■□□□ 1.45
CDKN1B-201ENST00000228872 FAM9BQ8IZU0 186 aa24.09■■□□□ 1.45
CDKN1B-201ENST00000228872 NAIPQ13075 1403 aa24.08■■□□□ 1.45
CDKN1B-201ENST00000228872 CAMSAP2Q08AD1 1489 aa24.07■■□□□ 1.44
CDKN1B-201ENST00000228872 PRKRIP1Q9H875 184 aaPredicted RBP24.07■■□□□ 1.44
CDKN1B-201ENST00000228872 GCC2Q8IWJ2 1684 aa24.06■■□□□ 1.44
CDKN1B-201ENST00000228872 PREX2Q70Z35 1606 aa24.06■■□□□ 1.44
CDKN1B-201ENST00000228872 AKNAQ7Z591 1439 aa24.06■■□□□ 1.44
CDKN1B-201ENST00000228872 ANO8Q9HCE9 1232 aaPredicted RBP24.06■■□□□ 1.44
CDKN1B-201ENST00000228872 MRS2Q9HD23 443 aa24.05■■□□□ 1.44
CDKN1B-201ENST00000228872 IPO9Q96P70 1041 aaKnown RBP24.04■■□□□ 1.44
CDKN1B-201ENST00000228872 EIF4G2P78344 907 aaKnown RBP eCLIP24.04■■□□□ 1.44
CDKN1B-201ENST00000228872 CFDP1Q9UEE9 299 aaPredicted RBP24.04■■□□□ 1.44
CDKN1B-201ENST00000228872 DAPK1P53355 1430 aa24.04■■□□□ 1.44
CDKN1B-201ENST00000228872 CDC42BPBQ9Y5S2 1711 aa24.03■■□□□ 1.44
CDKN1B-201ENST00000228872 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.03■■□□□ 1.442e-7■□□□□ 10.2
CDKN1B-201ENST00000228872 ANP32AP39687 249 aaKnown RBP24.02■■□□□ 1.44
CDKN1B-201ENST00000228872 CROCC2H7BZ55 1655 aa24.02■■□□□ 1.44
CDKN1B-201ENST00000228872 TTC37Q6PGP7 1564 aa24.02■■□□□ 1.44
CDKN1B-201ENST00000228872 RTL5Q5HYW3 569 aaPredicted RBP24.01■■□□□ 1.43
CDKN1B-201ENST00000228872 MYO5CQ9NQX4 1742 aa24■■□□□ 1.43
CDKN1B-201ENST00000228872 ABCC5O15440 1437 aa24■■□□□ 1.43
CDKN1B-201ENST00000228872 ZNF644Q9H582 1327 aaPredicted RBP23.99■■□□□ 1.43
CDKN1B-201ENST00000228872 CHIC2Q9UKJ5 165 aa23.98■■□□□ 1.43
CDKN1B-201ENST00000228872 CCDC7Q96M83 1385 aa23.98■■□□□ 1.43
CDKN1B-201ENST00000228872 NCOA1Q15788 1441 aa23.97■■□□□ 1.43
CDKN1B-201ENST00000228872 ROCK1Q13464 1354 aa23.97■■□□□ 1.43
CDKN1B-201ENST00000228872 ADGBQ8N7X0 1667 aa23.97■■□□□ 1.43
CDKN1B-201ENST00000228872 C11orf95C9JLR9 678 aaPredicted RBP23.96■■□□□ 1.43
CDKN1B-201ENST00000228872 RRP7BPQ9NSQ0 103 aa23.96■■□□□ 1.43
CDKN1B-201ENST00000228872 ZBTB47Q9UFB7 747 aaPredicted RBP23.96■■□□□ 1.43
CDKN1B-201ENST00000228872 SMG6Q86US8 1419 aaKnown RBP23.95■■□□□ 1.42
CDKN1B-201ENST00000228872 SAMD9LQ8IVG5 1584 aa23.93■■□□□ 1.42
CDKN1B-201ENST00000228872 ARHGEF5Q12774 1597 aa23.92■■□□□ 1.42
CDKN1B-201ENST00000228872 SALL2Q9Y467 1007 aaPredicted RBP23.92■■□□□ 1.42
CDKN1B-201ENST00000228872 WDR7Q9Y4E6 1490 aa23.92■■□□□ 1.42
CDKN1B-201ENST00000228872 CCDC136Q96JN2 1154 aa23.91■■□□□ 1.42
CDKN1B-201ENST00000228872 KDM6BO15054 1643 aa23.91■■□□□ 1.42
CDKN1B-201ENST00000228872 RNF123Q5XPI4 1314 aa23.91■■□□□ 1.42
CDKN1B-201ENST00000228872 SHANK2Q9UPX8 1470 aa23.89■■□□□ 1.42
CDKN1B-201ENST00000228872 DENND4BO75064 1496 aaPredicted RBP23.89■■□□□ 1.41
CDKN1B-201ENST00000228872 ADGRL2O95490 1459 aa23.89■■□□□ 1.41
CDKN1B-201ENST00000228872 ZNF777Q9ULD5 760 aaPredicted RBP23.88■■□□□ 1.41
CDKN1B-201ENST00000228872 ARHGAP5Q13017 1502 aa23.87■■□□□ 1.41
CDKN1B-201ENST00000228872 IL27Q8NEV9 243 aa23.87■■□□□ 1.41
CDKN1B-201ENST00000228872 NUDCQ9Y266 331 aa23.87■■□□□ 1.41
CDKN1B-201ENST00000228872 ARAP3Q8WWN8 1544 aa23.85■■□□□ 1.41
CDKN1B-201ENST00000228872 PLCH2O75038 1416 aa23.85■■□□□ 1.41
CDKN1B-201ENST00000228872 MBD5Q9P267 1494 aa23.84■■□□□ 1.41
CDKN1B-201ENST00000228872 ABCA9Q8IUA7 1624 aa23.84■■□□□ 1.41
CDKN1B-201ENST00000228872 ASXL2Q76L83 1435 aa23.83■■□□□ 1.4
CDKN1B-201ENST00000228872 L3MBTL2Q969R5 705 aa23.82■■□□□ 1.4
CDKN1B-201ENST00000228872 PLEKHH2Q8IVE3 1493 aa23.82■■□□□ 1.4
CDKN1B-201ENST00000228872 RIMBP3CA6NJZ7 1639 aa23.81■■□□□ 1.4
CDKN1B-201ENST00000228872 RIMBP3BA6NNM3 1639 aa23.81■■□□□ 1.4
CDKN1B-201ENST00000228872 RIMBP3Q9UFD9 1639 aa23.81■■□□□ 1.4
CDKN1B-201ENST00000228872 CCDC141Q6ZP82 1450 aa23.8■■□□□ 1.4
CDKN1B-201ENST00000228872 KIF7Q2M1P5 1343 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms