RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 WDR43Q15061 677 aaKnown RBP eCLIP19.01■□□□□ 0.63
PRDM4-201ENST00000228437 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19■□□□□ 0.63
PRDM4-201ENST00000228437 FRAT2O75474 233 aaPredicted RBP18.99■□□□□ 0.63
PRDM4-201ENST00000228437 DCAF11Q8TEB1 546 aa18.97■□□□□ 0.63
PRDM4-201ENST00000228437 BACH2Q9BYV9 841 aa18.97■□□□□ 0.63
PRDM4-201ENST00000228437 UPF2Q9HAU5 1272 aaKnown RBP18.97■□□□□ 0.63
PRDM4-201ENST00000228437 ATAD2BQ9ULI0 1458 aa18.96■□□□□ 0.63
PRDM4-201ENST00000228437 IGF1RP08069 1367 aa18.96■□□□□ 0.63
PRDM4-201ENST00000228437 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.95■□□□□ 0.62
PRDM4-201ENST00000228437 UACAQ9BZF9 1416 aa18.95■□□□□ 0.62
PRDM4-201ENST00000228437 NEUROD2Q15784 382 aa18.95■□□□□ 0.62
PRDM4-201ENST00000228437 PKD2Q13563 968 aa18.94■□□□□ 0.62
PRDM4-201ENST00000228437 ST20-MTHFSA0A0A6YYL1 179 aa18.93■□□□□ 0.62
PRDM4-201ENST00000228437 VSIG10Q8N0Z9 540 aa18.93■□□□□ 0.62
PRDM4-201ENST00000228437 FGD6Q6ZV73 1430 aa18.92■□□□□ 0.62
PRDM4-201ENST00000228437 BECN1Q14457 450 aa18.91■□□□□ 0.62
PRDM4-201ENST00000228437 HSP90AA1P07900 732 aaKnown RBP18.89■□□□□ 0.61
PRDM4-201ENST00000228437 PNISRQ8TF01 805 aaKnown RBP18.88■□□□□ 0.61
PRDM4-201ENST00000228437 USP47Q96K76 1375 aa18.85■□□□□ 0.61
PRDM4-201ENST00000228437 SMG6Q86US8 1419 aaKnown RBP18.85■□□□□ 0.61
PRDM4-201ENST00000228437 TIAM1Q13009 1591 aa18.85■□□□□ 0.61
PRDM4-201ENST00000228437 ERICH3Q5RHP9 1530 aa18.85■□□□□ 0.61
PRDM4-201ENST00000228437 MS4A1P11836 297 aa18.85■□□□□ 0.61
PRDM4-201ENST00000228437 ARID3AQ99856 593 aa18.85■□□□□ 0.61
PRDM4-201ENST00000228437 PNNQ9H307 717 aaKnown RBP18.85■□□□□ 0.61
PRDM4-201ENST00000228437 CFDP1Q9UEE9 299 aaPredicted RBP18.84■□□□□ 0.61
PRDM4-201ENST00000228437 RSPH6AQ9H0K4 717 aa18.83■□□□□ 0.6
PRDM4-201ENST00000228437 CCDC146Q8IYE0 955 aa18.82■□□□□ 0.6
PRDM4-201ENST00000228437 TRIM44Q96DX7 344 aaPredicted RBP18.82■□□□□ 0.6
PRDM4-201ENST00000228437 ZNF644Q9H582 1327 aaPredicted RBP18.82■□□□□ 0.6
PRDM4-201ENST00000228437 FAM161AQ3B820 660 aa18.82■□□□□ 0.6
PRDM4-201ENST00000228437 NLRP13Q86W25 1043 aa18.82■□□□□ 0.6
PRDM4-201ENST00000228437 MYBBP1AQ9BQG0 1328 aaKnown RBP18.81■□□□□ 0.6
PRDM4-201ENST00000228437 C20orf194Q5TEA3 1177 aa18.8■□□□□ 0.6
PRDM4-201ENST00000228437 RALBP1Q15311 655 aa18.79■□□□□ 0.6
PRDM4-201ENST00000228437 KTN1Q86UP2 1357 aaKnown RBP18.78■□□□□ 0.6
PRDM4-201ENST00000228437 AQRO60306 1485 aaKnown RBP eCLIP18.78■□□□□ 0.64e-6■■■■■ 31
PRDM4-201ENST00000228437 TNNT2P45379 298 aaPredicted RBP18.78■□□□□ 0.6
PRDM4-201ENST00000228437 KNSTRNQ9Y448 316 aa18.77■□□□□ 0.6
PRDM4-201ENST00000228437 TDRD9Q8NDG6 1382 aaKnown RBP18.77■□□□□ 0.59
PRDM4-201ENST00000228437 POGKQ9P215 609 aa18.76■□□□□ 0.59
PRDM4-201ENST00000228437 NAIPQ13075 1403 aa18.76■□□□□ 0.59
PRDM4-201ENST00000228437 TSPY4P0CV99 314 aa18.76■□□□□ 0.59
PRDM4-201ENST00000228437 TSPY10P0CW01 314 aa18.76■□□□□ 0.59
PRDM4-201ENST00000228437 PTPRKQ15262 1439 aa18.75■□□□□ 0.59
PRDM4-201ENST00000228437 UBE2Q2Q8WVN8 375 aa18.75■□□□□ 0.59
PRDM4-201ENST00000228437 SENP3Q9H4L4 574 aaPredicted RBP18.75■□□□□ 0.59
PRDM4-201ENST00000228437 TOP2BQ02880 1626 aa18.74■□□□□ 0.59
PRDM4-201ENST00000228437 L1TD1Q5T7N2 865 aaKnown RBP18.74■□□□□ 0.59
PRDM4-201ENST00000228437 HSP90AA2PQ14568 343 aaPredicted RBP18.74■□□□□ 0.59
PRDM4-201ENST00000228437 KIF15Q9NS87 1388 aa18.74■□□□□ 0.59
PRDM4-201ENST00000228437 ZBTB7CA1YPR0 619 aa18.74■□□□□ 0.59
PRDM4-201ENST00000228437 HFM1A2PYH4 1435 aa18.74■□□□□ 0.59
PRDM4-201ENST00000228437 CLUAP1Q96AJ1 413 aa18.73■□□□□ 0.59
PRDM4-201ENST00000228437 PDE3BQ13370 1112 aa18.73■□□□□ 0.59
PRDM4-201ENST00000228437 CENPQQ7L2Z9 268 aaPredicted RBP18.72■□□□□ 0.59
PRDM4-201ENST00000228437 CFTRP13569 1480 aa18.72■□□□□ 0.59
PRDM4-201ENST00000228437 GOLGA6L3A6NEY3 463 aa18.72■□□□□ 0.59
PRDM4-201ENST00000228437 PKNOX2Q96KN3 472 aa18.72■□□□□ 0.59
PRDM4-201ENST00000228437 ANP32BQ92688 251 aaKnown RBP18.71■□□□□ 0.59
PRDM4-201ENST00000228437 CUX1P39880 1505 aa18.71■□□□□ 0.59
PRDM4-201ENST00000228437 PANK3Q9H999 370 aa18.7■□□□□ 0.58
PRDM4-201ENST00000228437 NCLP19338 710 aaKnown RBP18.7■□□□□ 0.58
PRDM4-201ENST00000228437 MYOM3Q5VTT5 1437 aa18.7■□□□□ 0.58
PRDM4-201ENST00000228437 ROCK2O75116 1388 aaKnown RBP18.7■□□□□ 0.58
PRDM4-201ENST00000228437 BCL2L13Q9BXK5 485 aa18.69■□□□□ 0.58
PRDM4-201ENST00000228437 NCOA2Q15596 1464 aa18.69■□□□□ 0.58
PRDM4-201ENST00000228437 FOXD4L1Q9NU39 408 aa18.68■□□□□ 0.58
PRDM4-201ENST00000228437 NCOA1Q15788 1441 aa18.68■□□□□ 0.58
PRDM4-201ENST00000228437 GOLGA2Q08379 1002 aa18.67■□□□□ 0.58
PRDM4-201ENST00000228437 COG6Q9Y2V7 657 aa18.67■□□□□ 0.58
PRDM4-201ENST00000228437 NUP155O75694 1391 aa18.66■□□□□ 0.58
PRDM4-201ENST00000228437 MFAP1P55081 439 aaKnown RBP18.66■□□□□ 0.58
PRDM4-201ENST00000228437 ADAMTS8Q9UP79 889 aa18.65■□□□□ 0.58
PRDM4-201ENST00000228437 TPRNQ4KMQ1 711 aa18.64■□□□□ 0.57
PRDM4-201ENST00000228437 FAM43AQ8N2R8 423 aa18.64■□□□□ 0.57
PRDM4-201ENST00000228437 RAD54L2Q9Y4B4 1467 aa18.63■□□□□ 0.57
PRDM4-201ENST00000228437 PCF11O94913 1555 aaKnown RBP18.62■□□□□ 0.57
PRDM4-201ENST00000228437 WASHC2CQ9Y4E1 1318 aa18.62■□□□□ 0.57
PRDM4-201ENST00000228437 FGD5Q6ZNL6 1462 aa18.61■□□□□ 0.57
PRDM4-201ENST00000228437 CASKIN1Q8WXD9 1431 aa18.61■□□□□ 0.57
PRDM4-201ENST00000228437 DNAJC5BQ9UF47 199 aa18.61■□□□□ 0.57
PRDM4-201ENST00000228437 RRP7AQ9Y3A4 280 aaKnown RBP18.61■□□□□ 0.57
PRDM4-201ENST00000228437 APAF1O14727 1248 aa18.6■□□□□ 0.57
PRDM4-201ENST00000228437 MYH16Q9H6N6 1097 aa18.6■□□□□ 0.57
PRDM4-201ENST00000228437 TMF1P82094 1093 aa18.6■□□□□ 0.57
PRDM4-201ENST00000228437 BCAR3O75815 825 aa18.59■□□□□ 0.57
PRDM4-201ENST00000228437 CHGAP10645 457 aaKnown RBP18.59■□□□□ 0.57
PRDM4-201ENST00000228437 PANK1Q8TE04 598 aa18.59■□□□□ 0.57
PRDM4-201ENST00000228437 FTSJ3Q8IY81 847 aaKnown RBP18.57■□□□□ 0.56
PRDM4-201ENST00000228437 NBPF1Q3BBV0 1214 aa18.57■□□□□ 0.56
PRDM4-201ENST00000228437 BRD4O60885 1362 aaPredicted RBP18.56■□□□□ 0.56
PRDM4-201ENST00000228437 HSP90AB1P08238 724 aaKnown RBP18.56■□□□□ 0.56
PRDM4-201ENST00000228437 HSCBQ8IWL3 235 aa18.54■□□□□ 0.56
PRDM4-201ENST00000228437 MAP3K1Q13233 1512 aa18.52■□□□□ 0.56
PRDM4-201ENST00000228437 FYCO1Q9BQS8 1478 aa18.52■□□□□ 0.55
PRDM4-201ENST00000228437 PTPN23Q9H3S7 1636 aa18.51■□□□□ 0.55
PRDM4-201ENST00000228437 PANK2Q9BZ23 570 aa18.5■□□□□ 0.55
PRDM4-201ENST00000228437 RRAGDQ9NQL2 400 aaPredicted RBP18.5■□□□□ 0.55
PRDM4-201ENST00000228437 RNF123Q5XPI4 1314 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms