RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 RRP7BPQ9NSQ0 103 aa19.4■□□□□ 0.7
SF1-201ENST00000227503 AKNAQ7Z591 1439 aa19.39■□□□□ 0.69
SF1-201ENST00000227503 MYT1LQ9UL68 1186 aa19.38■□□□□ 0.69
SF1-201ENST00000227503 CHIC2Q9UKJ5 165 aa19.37■□□□□ 0.69
SF1-201ENST00000227503 SENP3-EIF4A1A0A087X0R7 540 aa19.37■□□□□ 0.69
SF1-201ENST00000227503 WDR62O43379 1518 aa19.37■□□□□ 0.69
SF1-201ENST00000227503 CDK13Q14004 1512 aaKnown RBP19.37■□□□□ 0.69
SF1-201ENST00000227503 MIA2Q96PC5 1412 aa19.36■□□□□ 0.69
SF1-201ENST00000227503 FAM9BQ8IZU0 186 aa19.36■□□□□ 0.69
SF1-201ENST00000227503 KDM6BO15054 1643 aa19.36■□□□□ 0.69
SF1-201ENST00000227503 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.35■□□□□ 0.69
SF1-201ENST00000227503 MRC2Q9UBG0 1479 aa19.32■□□□□ 0.68
SF1-201ENST00000227503 CNGB1Q14028 1251 aaPredicted RBP19.3■□□□□ 0.68
SF1-201ENST00000227503 MPHOSPH9Q99550 1183 aa19.28■□□□□ 0.68
SF1-201ENST00000227503 HSPA5P11021 654 aaKnown RBP19.26■□□□□ 0.67
SF1-201ENST00000227503 ARID3CA6NKF2 412 aa19.26■□□□□ 0.67
SF1-201ENST00000227503 WASHC2AQ641Q2 1341 aa19.26■□□□□ 0.67
SF1-201ENST00000227503 RTL5Q5HYW3 569 aaPredicted RBP19.26■□□□□ 0.67
SF1-201ENST00000227503 ZNF608Q9ULD9 1512 aaPredicted RBP19.24■□□□□ 0.67
SF1-201ENST00000227503 DISP1Q96F81 1524 aa19.24■□□□□ 0.67
SF1-201ENST00000227503 ROCK1Q13464 1354 aa19.23■□□□□ 0.67
SF1-201ENST00000227503 KIAA0556O60303 1618 aa19.22■□□□□ 0.67
SF1-201ENST00000227503 DAPK1P53355 1430 aa19.22■□□□□ 0.67
SF1-201ENST00000227503 IFT140Q96RY7 1462 aa19.22■□□□□ 0.67
SF1-201ENST00000227503 KIAA0586Q9BVV6 1533 aa19.22■□□□□ 0.67
SF1-201ENST00000227503 L3MBTL2Q969R5 705 aa19.21■□□□□ 0.67
SF1-201ENST00000227503 NUP153P49790 1475 aaKnown RBP19.21■□□□□ 0.67
SF1-201ENST00000227503 ABCC5O15440 1437 aa19.2■□□□□ 0.66
SF1-201ENST00000227503 EIF4G2P78344 907 aaKnown RBP eCLIP19.2■□□□□ 0.661e-7■■□□□ 12.5
SF1-201ENST00000227503 FOXD1Q16676 465 aa19.2■□□□□ 0.66
SF1-201ENST00000227503 NPM2Q86SE8 214 aaKnown RBP19.19■□□□□ 0.66
SF1-201ENST00000227503 DNMT1P26358 1616 aaKnown RBP19.19■□□□□ 0.66
SF1-201ENST00000227503 MRS2Q9HD23 443 aa19.19■□□□□ 0.66
SF1-201ENST00000227503 ANKRD30BQ9BXX2 1392 aa19.19■□□□□ 0.66
SF1-201ENST00000227503 ANP32AP39687 249 aaKnown RBP19.18■□□□□ 0.66
SF1-201ENST00000227503 ERICH6BQ5W0A0 696 aa19.18■□□□□ 0.66
SF1-201ENST00000227503 IPO9Q96P70 1041 aaKnown RBP19.18■□□□□ 0.66
SF1-201ENST00000227503 ZBTB47Q9UFB7 747 aaPredicted RBP19.18■□□□□ 0.66
SF1-201ENST00000227503 LAS1LQ9Y4W2 734 aaKnown RBP19.17■□□□□ 0.66
SF1-201ENST00000227503 ZNF644Q9H582 1327 aaPredicted RBP19.17■□□□□ 0.66
SF1-201ENST00000227503 RPRD2Q5VT52 1461 aaKnown RBP19.16■□□□□ 0.66
SF1-201ENST00000227503 RAPGEF6Q8TEU7 1601 aa19.16■□□□□ 0.66
SF1-201ENST00000227503 CNTLNQ9NXG0 1405 aa19.14■□□□□ 0.65
SF1-201ENST00000227503 GRIN2AQ12879 1464 aa19.14■□□□□ 0.65
SF1-201ENST00000227503 TEX14Q8IWB6 1497 aa19.14■□□□□ 0.65
SF1-201ENST00000227503 NCOA1Q15788 1441 aa19.13■□□□□ 0.65
SF1-201ENST00000227503 C11orf95C9JLR9 678 aaPredicted RBP19.13■□□□□ 0.65
SF1-201ENST00000227503 NBPF8Q3BBV2 869 aa19.12■□□□□ 0.65
SF1-201ENST00000227503 CCDC7Q96M83 1385 aa19.11■□□□□ 0.65
SF1-201ENST00000227503 EIF4G3O43432 1585 aaKnown RBP19.09■□□□□ 0.65
SF1-201ENST00000227503 PRKRIP1Q9H875 184 aaPredicted RBP19.09■□□□□ 0.65
SF1-201ENST00000227503 ZBED9Q6R2W3 1325 aa19.08■□□□□ 0.64
SF1-201ENST00000227503 PRG4Q92954 1404 aaPredicted RBP19.08■□□□□ 0.64
SF1-201ENST00000227503 TROQ12816 1431 aaPredicted RBP19.07■□□□□ 0.64
SF1-201ENST00000227503 SPATA31E1Q6ZUB1 1445 aa19.07■□□□□ 0.64
SF1-201ENST00000227503 SLC4A1APQ9BWU0 796 aaKnown RBP19.07■□□□□ 0.64
SF1-201ENST00000227503 PZPP20742 1482 aa19.06■□□□□ 0.64
SF1-201ENST00000227503 CAMSAP2Q08AD1 1489 aa19.05■□□□□ 0.64
SF1-201ENST00000227503 NEFMP07197 916 aa19.05■□□□□ 0.64
SF1-201ENST00000227503 GPATCH8Q9UKJ3 1502 aaKnown RBP19.03■□□□□ 0.64
SF1-201ENST00000227503 PLB1Q6P1J6 1458 aa19.03■□□□□ 0.64
SF1-201ENST00000227503 CEP170Q5SW79 1584 aa19.02■□□□□ 0.63
SF1-201ENST00000227503 CFDP1Q9UEE9 299 aaPredicted RBP19.02■□□□□ 0.63
SF1-201ENST00000227503 MAGI1Q96QZ7 1491 aaPredicted RBP19.01■□□□□ 0.63
SF1-201ENST00000227503 ITSN2Q9NZM3 1697 aa19.01■□□□□ 0.63
SF1-201ENST00000227503 ADCY10Q96PN6 1610 aa19.01■□□□□ 0.63
SF1-201ENST00000227503 BRPF3Q9ULD4 1205 aa19■□□□□ 0.63
SF1-201ENST00000227503 KIF7Q2M1P5 1343 aa19■□□□□ 0.63
SF1-201ENST00000227503 ADGRL2O95490 1459 aa19■□□□□ 0.63
SF1-201ENST00000227503 ADGBQ8N7X0 1667 aa19■□□□□ 0.63
SF1-201ENST00000227503 KIF14Q15058 1648 aa19■□□□□ 0.63
SF1-201ENST00000227503 POLR1AO95602 1720 aaPredicted RBP18.99■□□□□ 0.63
SF1-201ENST00000227503 MBD5Q9P267 1494 aa18.98■□□□□ 0.63
SF1-201ENST00000227503 POLR3GLQ9BT43 218 aa18.98■□□□□ 0.63
SF1-201ENST00000227503 SYNJ2O15056 1496 aa18.98■□□□□ 0.63
SF1-201ENST00000227503 CROCC2H7BZ55 1655 aa18.97■□□□□ 0.63
SF1-201ENST00000227503 EIF5BO60841 1220 aaKnown RBP18.96■□□□□ 0.63
SF1-201ENST00000227503 CHMP7Q8WUX9 453 aaPredicted RBP18.96■□□□□ 0.63
SF1-201ENST00000227503 KIAA1107Q9UPP5 1409 aa18.96■□□□□ 0.63
SF1-201ENST00000227503 SKAP1Q86WV1 359 aa18.93■□□□□ 0.62
SF1-201ENST00000227503 ZNF777Q9ULD5 760 aaPredicted RBP18.93■□□□□ 0.62
SF1-201ENST00000227503 NUP160Q12769 1436 aa18.92■□□□□ 0.62
SF1-201ENST00000227503 ANKRD30AQ9BXX3 1397 aa18.92■□□□□ 0.62
SF1-201ENST00000227503 CARMIL2Q6F5E8 1435 aa18.92■□□□□ 0.62
SF1-201ENST00000227503 NUDCQ9Y266 331 aa18.91■□□□□ 0.62
SF1-201ENST00000227503 JPH4Q96JJ6 628 aa18.91■□□□□ 0.62
SF1-201ENST00000227503 PKD2Q13563 968 aa18.91■□□□□ 0.62
SF1-201ENST00000227503 ANKRD50Q9ULJ7 1429 aa18.89■□□□□ 0.61
SF1-201ENST00000227503 ERCC6Q03468 1493 aa18.88■□□□□ 0.61
SF1-201ENST00000227503 ABCC10Q5T3U5 1492 aa18.88■□□□□ 0.61
SF1-201ENST00000227503 SMG6Q86US8 1419 aaKnown RBP18.88■□□□□ 0.61
SF1-201ENST00000227503 DHX29Q7Z478 1369 aaKnown RBP18.88■□□□□ 0.61
SF1-201ENST00000227503 FBLN2P98095 1184 aa18.87■□□□□ 0.61
SF1-201ENST00000227503 BCORL1Q5H9F3 1711 aa18.87■□□□□ 0.61
SF1-201ENST00000227503 USP47Q96K76 1375 aa18.87■□□□□ 0.61
SF1-201ENST00000227503 ABCA8O94911 1581 aa18.87■□□□□ 0.61
SF1-201ENST00000227503 CDC42BPAQ5VT25 1732 aa18.86■□□□□ 0.61
SF1-201ENST00000227503 SHANK2Q9UPX8 1470 aa18.86■□□□□ 0.61
SF1-201ENST00000227503 SLC4A3P48751 1232 aa18.85■□□□□ 0.61
SF1-201ENST00000227503 EXOC6Q8TAG9 804 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms