RNA–Protein interactions for RNA: ENST00000225831.4

CCL2-201, Transcript of C-C motif chemokine ligand 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL2, Length 741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2-201ENST00000225831 ILDR1Q86SU0 546 aaPredicted RBP12.81□□□□□ -0.36
CCL2-201ENST00000225831 RIOK3O14730 519 aaKnown RBP12.77□□□□□ -0.37
CCL2-201ENST00000225831 EFCAB3Q8N7B9 438 aa12.77□□□□□ -0.37
CCL2-201ENST00000225831 ERBB3P21860 1342 aa12.77□□□□□ -0.37
CCL2-201ENST00000225831 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.76□□□□□ -0.37
CCL2-201ENST00000225831 ZFP91Q96JP5 570 aaPredicted RBP12.76□□□□□ -0.37
CCL2-201ENST00000225831 SMARCA4P51532 1647 aa12.74□□□□□ -0.37
CCL2-201ENST00000225831 ZNF710Q8N1W2 664 aa12.71□□□□□ -0.37
CCL2-201ENST00000225831 VGFO15240 615 aaPredicted RBP12.69□□□□□ -0.38
CCL2-201ENST00000225831 PTGER2P43116 358 aa12.69□□□□□ -0.38
CCL2-201ENST00000225831 PKD2Q13563 968 aa12.69□□□□□ -0.38
CCL2-201ENST00000225831 DOK7Q18PE1 504 aa12.68□□□□□ -0.38
CCL2-201ENST00000225831 ECM2O94769 699 aaPredicted RBP12.66□□□□□ -0.38
CCL2-201ENST00000225831 VARS2Q5ST30 1063 aaKnown RBP12.66□□□□□ -0.38
CCL2-201ENST00000225831 BOLA1Q9Y3E2 137 aa12.65□□□□□ -0.38
CCL2-201ENST00000225831 ZNF687Q8N1G0 1237 aa12.64□□□□□ -0.39
CCL2-201ENST00000225831 PHF8Q9UPP1 1060 aa12.63□□□□□ -0.39
CCL2-201ENST00000225831 SMARCA2P51531 1590 aa12.63□□□□□ -0.39
CCL2-201ENST00000225831 BAZ1AQ9NRL2 1556 aaPredicted RBP12.63□□□□□ -0.39
CCL2-201ENST00000225831 RGL2O15211 777 aa12.62□□□□□ -0.39
CCL2-201ENST00000225831 MS4A4AQ96JQ5 239 aa12.62□□□□□ -0.39
CCL2-201ENST00000225831 HMGXB3Q12766 1538 aa12.62□□□□□ -0.39
CCL2-201ENST00000225831 BCL11BQ9C0K0 894 aaPredicted RBP12.6□□□□□ -0.39
CCL2-201ENST00000225831 NCAPD3P42695 1498 aa12.59□□□□□ -0.39
CCL2-201ENST00000225831 ATAD2BQ9ULI0 1458 aa12.59□□□□□ -0.39
CCL2-201ENST00000225831 PEG3Q9GZU2 1588 aa12.58□□□□□ -0.4
CCL2-201ENST00000225831 RIMBP2O15034 1052 aa12.57□□□□□ -0.4
CCL2-201ENST00000225831 STK24Q9Y6E0 443 aa12.57□□□□□ -0.4
CCL2-201ENST00000225831 SOX12O15370 315 aa12.56□□□□□ -0.4
CCL2-201ENST00000225831 G3V3G9 751 aa12.55□□□□□ -0.4
CCL2-201ENST00000225831 ZSWIM6Q9HCJ5 1215 aa12.54□□□□□ -0.4
CCL2-201ENST00000225831 MROH2BQ7Z745 1585 aa12.54□□□□□ -0.4
CCL2-201ENST00000225831 STK25O00506 426 aa12.53□□□□□ -0.4
CCL2-201ENST00000225831 MICALL2Q8IY33 904 aa12.53□□□□□ -0.4
CCL2-201ENST00000225831 TMEM92Q6UXU6 159 aa12.52□□□□□ -0.41
CCL2-201ENST00000225831 BAZ1BQ9UIG0 1483 aaKnown RBP12.52□□□□□ -0.41
CCL2-201ENST00000225831 FBXO22Q8NEZ5 403 aa12.51□□□□□ -0.41
CCL2-201ENST00000225831 WIZO95785 1651 aa12.49□□□□□ -0.41
CCL2-201ENST00000225831 MFRPQ9BY79 579 aa12.49□□□□□ -0.41
CCL2-201ENST00000225831 GPR153Q6NV75 609 aa12.47□□□□□ -0.41
CCL2-201ENST00000225831 KIF21AQ7Z4S6 1674 aa12.46□□□□□ -0.41
CCL2-201ENST00000225831 TAOK2Q9UL54 1235 aa12.46□□□□□ -0.41
CCL2-201ENST00000225831 PLA2G2EQ9NZK7 142 aa12.45□□□□□ -0.42
CCL2-201ENST00000225831 NLRP6P59044 892 aa12.44□□□□□ -0.42
CCL2-201ENST00000225831 ANKRD13DQ6ZTN6 518 aa12.44□□□□□ -0.42
CCL2-201ENST00000225831 NESP48681 1621 aa12.43□□□□□ -0.42
CCL2-201ENST00000225831 ERCC6Q03468 1493 aa12.41□□□□□ -0.42
CCL2-201ENST00000225831 LAMC3Q9Y6N6 1575 aa12.39□□□□□ -0.43
CCL2-201ENST00000225831 LSM11P83369 360 aaKnown RBP eCLIP12.38□□□□□ -0.43
CCL2-201ENST00000225831 THOC2Q8NI27 1593 aaKnown RBP12.38□□□□□ -0.43
CCL2-201ENST00000225831 PRDM2Q13029 1718 aa12.37□□□□□ -0.43
CCL2-201ENST00000225831 CUX2O14529 1486 aa12.35□□□□□ -0.43
CCL2-201ENST00000225831 PPP1R37O75864 691 aa12.34□□□□□ -0.43
CCL2-201ENST00000225831 HCSTQ9UBK5 93 aa12.32□□□□□ -0.44
CCL2-201ENST00000225831 ZNF316A6NFI3 1004 aaPredicted RBP12.3□□□□□ -0.44
CCL2-201ENST00000225831 ARSIQ5FYB1 569 aa12.28□□□□□ -0.44
CCL2-201ENST00000225831 HS6ST3Q8IZP7 471 aa12.28□□□□□ -0.44
CCL2-201ENST00000225831 TOP2AP11388 1531 aaKnown RBP12.27□□□□□ -0.44
CCL2-201ENST00000225831 KIF3CO14782 793 aa12.26□□□□□ -0.45
CCL2-201ENST00000225831 CHGAP10645 457 aaKnown RBP12.26□□□□□ -0.45
CCL2-201ENST00000225831 RSF1Q96T23 1441 aaPredicted RBP12.26□□□□□ -0.45
CCL2-201ENST00000225831 C2orf72A6NCS6 295 aa12.25□□□□□ -0.45
CCL2-201ENST00000225831 PBX2P40425 430 aa12.23□□□□□ -0.45
CCL2-201ENST00000225831 KHSRPQ92945 711 aaKnown RBP eCLIP12.23□□□□□ -0.45
CCL2-201ENST00000225831 NKX1-1Q15270 411 aaPredicted RBP12.21□□□□□ -0.45
CCL2-201ENST00000225831 PDS5BQ9NTI5 1447 aa12.2□□□□□ -0.46
CCL2-201ENST00000225831 CADPSQ9ULU8 1353 aa12.18□□□□□ -0.46
CCL2-201ENST00000225831 POTEEQ6S8J3 1075 aa12.17□□□□□ -0.46
CCL2-201ENST00000225831 WDR62O43379 1518 aa12.16□□□□□ -0.46
CCL2-201ENST00000225831 MRC2Q9UBG0 1479 aa12.14□□□□□ -0.47
CCL2-201ENST00000225831 CEP164Q9UPV0 1460 aa12.14□□□□□ -0.47
CCL2-201ENST00000225831 TMC2Q8TDI7 906 aa12.12□□□□□ -0.47
CCL2-201ENST00000225831 CFTRP13569 1480 aa12.12□□□□□ -0.47
CCL2-201ENST00000225831 FANCD2Q9BXW9 1451 aa12.11□□□□□ -0.47
CCL2-201ENST00000225831 RGS20O76081 388 aa12.11□□□□□ -0.47
CCL2-201ENST00000225831 DNAJC5Q9H3Z4 198 aa12.1□□□□□ -0.47
CCL2-201ENST00000225831 AXIN2Q9Y2T1 843 aa12.09□□□□□ -0.47
CCL2-201ENST00000225831 NUDT7P0C024 238 aa12.07□□□□□ -0.48
CCL2-201ENST00000225831 CCDC88BA6NC98 1476 aa12.07□□□□□ -0.48
CCL2-201ENST00000225831 ADGRD1Q6QNK2 874 aa12.06□□□□□ -0.48
CCL2-201ENST00000225831 IRX2Q9BZI1 471 aaPredicted RBP12.06□□□□□ -0.48
CCL2-201ENST00000225831 PCDHGA4Q9Y5G9 962 aa12.06□□□□□ -0.48
CCL2-201ENST00000225831 URB2Q14146 1524 aaKnown RBP12.04□□□□□ -0.48
CCL2-201ENST00000225831 SLC34A2O95436 690 aa12.02□□□□□ -0.49
CCL2-201ENST00000225831 DSG2Q14126 1118 aa12.01□□□□□ -0.49
CCL2-201ENST00000225831 GPHNQ9NQX3 736 aaPredicted RBP12.01□□□□□ -0.49
CCL2-201ENST00000225831 LHX6Q9UPM6 363 aa12.01□□□□□ -0.49
CCL2-201ENST00000225831 FOXK1P85037 733 aa12□□□□□ -0.49
CCL2-201ENST00000225831 PLPP6Q8IY26 295 aa12□□□□□ -0.49
CCL2-201ENST00000225831 HRO43593 1189 aa11.99□□□□□ -0.49
CCL2-201ENST00000225831 GTPBP6O43824 516 aaPredicted RBP11.99□□□□□ -0.49
CCL2-201ENST00000225831 IFFO2Q5TF58 517 aa11.98□□□□□ -0.49
CCL2-201ENST00000225831 TK2O00142 265 aa11.97□□□□□ -0.49
CCL2-201ENST00000225831 ARHGAP33O14559 1287 aa11.97□□□□□ -0.49
CCL2-201ENST00000225831 DNMBPQ6XZF7 1577 aa11.94□□□□□ -0.5
CCL2-201ENST00000225831 KDM4FA0A1W2PPD8 638 aa11.94□□□□□ -0.5
CCL2-201ENST00000225831 PTCD2Q8WV60 388 aaKnown RBP11.94□□□□□ -0.5
CCL2-201ENST00000225831 TOPBP1Q92547 1522 aa11.93□□□□□ -0.5
CCL2-201ENST00000225831 CRISPLD2Q9H0B8 497 aa11.93□□□□□ -0.5
CCL2-201ENST00000225831 NCKAP5LQ9HCH0 1330 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms