RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 GPATCH8Q9UKJ3 1502 aaKnown RBP36.1■■■■□ 3.37
RUNDC3A-201ENST00000225441 CYB5RLQ6IPT4 315 aa36.09■■■■□ 3.37
RUNDC3A-201ENST00000225441 TCOF1Q13428 1488 aaKnown RBP36.09■■■■□ 3.37
RUNDC3A-201ENST00000225441 NPM1P06748 294 aaKnown RBP eCLIP36.08■■■■□ 3.37
RUNDC3A-201ENST00000225441 WDR7Q9Y4E6 1490 aa36.06■■■■□ 3.36
RUNDC3A-201ENST00000225441 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.03■■■■□ 3.36
RUNDC3A-201ENST00000225441 CDC42BPAQ5VT25 1732 aa36.03■■■■□ 3.36
RUNDC3A-201ENST00000225441 ASXL2Q76L83 1435 aa36.02■■■■□ 3.36
RUNDC3A-201ENST00000225441 TTC37Q6PGP7 1564 aa36.01■■■■□ 3.36
RUNDC3A-201ENST00000225441 KCNH8Q96L42 1107 aa36.01■■■■□ 3.35
RUNDC3A-201ENST00000225441 MAPKBP1O60336 1514 aa36■■■■□ 3.35
RUNDC3A-201ENST00000225441 ITGAEP38570 1179 aa35.99■■■■□ 3.35
RUNDC3A-201ENST00000225441 CFDP1Q9UEE9 299 aaPredicted RBP35.98■■■■□ 3.35
RUNDC3A-201ENST00000225441 TIMELESSQ9UNS1 1208 aa35.96■■■■□ 3.35
RUNDC3A-201ENST00000225441 PREX2Q70Z35 1606 aa35.94■■■■□ 3.34
RUNDC3A-201ENST00000225441 CAMSAP2Q08AD1 1489 aa35.9■■■■□ 3.34
RUNDC3A-201ENST00000225441 ZNF644Q9H582 1327 aaPredicted RBP35.89■■■■□ 3.34
RUNDC3A-201ENST00000225441 MYO5CQ9NQX4 1742 aa35.88■■■■□ 3.33
RUNDC3A-201ENST00000225441 CDC42BPBQ9Y5S2 1711 aa35.88■■■■□ 3.33
RUNDC3A-201ENST00000225441 YTHDC1Q96MU7 727 aaKnown RBP35.87■■■■□ 3.33
RUNDC3A-201ENST00000225441 ABCA9Q8IUA7 1624 aa35.83■■■■□ 3.33
RUNDC3A-201ENST00000225441 ZNF777Q9ULD5 760 aaPredicted RBP35.83■■■■□ 3.33
RUNDC3A-201ENST00000225441 PTPRKQ15262 1439 aa35.83■■■■□ 3.33
RUNDC3A-201ENST00000225441 PLCH2O75038 1416 aa35.81■■■■□ 3.32
RUNDC3A-201ENST00000225441 ARHGAP5Q13017 1502 aa35.81■■■■□ 3.32
RUNDC3A-201ENST00000225441 DNMT1P26358 1616 aaKnown RBP35.79■■■■□ 3.32
RUNDC3A-201ENST00000225441 DAPK1P53355 1430 aa35.76■■■■□ 3.32
RUNDC3A-201ENST00000225441 SAMD9LQ8IVG5 1584 aa35.76■■■■□ 3.32
RUNDC3A-201ENST00000225441 ARAP3Q8WWN8 1544 aa35.75■■■■□ 3.31
RUNDC3A-201ENST00000225441 ABCC5O15440 1437 aa35.74■■■■□ 3.31
RUNDC3A-201ENST00000225441 EFCAB2Q5VUJ9 269 aa35.67■■■■□ 3.3
RUNDC3A-201ENST00000225441 PLEKHH2Q8IVE3 1493 aa35.65■■■■□ 3.3
RUNDC3A-201ENST00000225441 ARHGEF5Q12774 1597 aa35.65■■■■□ 3.3
RUNDC3A-201ENST00000225441 CROCC2H7BZ55 1655 aa35.64■■■■□ 3.3
RUNDC3A-201ENST00000225441 MBD5Q9P267 1494 aa35.64■■■■□ 3.3
RUNDC3A-201ENST00000225441 HFM1A2PYH4 1435 aa35.63■■■■□ 3.29
RUNDC3A-201ENST00000225441 CHIC2Q9UKJ5 165 aa35.62■■■■□ 3.29
RUNDC3A-201ENST00000225441 AKNAQ7Z591 1439 aa35.62■■■■□ 3.29
RUNDC3A-201ENST00000225441 KIAA1107Q9UPP5 1409 aa35.61■■■■□ 3.29
RUNDC3A-201ENST00000225441 SYCP2Q9BX26 1530 aa35.6■■■■□ 3.29
RUNDC3A-201ENST00000225441 HNRNPMP52272 730 aaKnown RBP eCLIP35.6■■■■□ 3.29
RUNDC3A-201ENST00000225441 CD109Q6YHK3 1445 aa35.58■■■■□ 3.29
RUNDC3A-201ENST00000225441 ROCK1Q13464 1354 aa35.58■■■■□ 3.29
RUNDC3A-201ENST00000225441 FANCAO15360 1455 aa35.57■■■■□ 3.28
RUNDC3A-201ENST00000225441 SHANK2Q9UPX8 1470 aa35.57■■■■□ 3.28
RUNDC3A-201ENST00000225441 GLI2P10070 1586 aa35.57■■■■□ 3.28
RUNDC3A-201ENST00000225441 NAIPQ13075 1403 aa35.57■■■■□ 3.28
RUNDC3A-201ENST00000225441 ABCC1P33527 1531 aa35.57■■■■□ 3.28
RUNDC3A-201ENST00000225441 CCDC141Q6ZP82 1450 aa35.56■■■■□ 3.28
RUNDC3A-201ENST00000225441 RSPH4AQ5TD94 716 aa35.55■■■■□ 3.28
RUNDC3A-201ENST00000225441 GCC2Q8IWJ2 1684 aa35.53■■■■□ 3.28
RUNDC3A-201ENST00000225441 ADGBQ8N7X0 1667 aa35.53■■■■□ 3.28
RUNDC3A-201ENST00000225441 ARHGEF12Q9NZN5 1544 aa35.53■■■■□ 3.28
RUNDC3A-201ENST00000225441 DIP2BQ9P265 1576 aa35.52■■■■□ 3.28
RUNDC3A-201ENST00000225441 RRP7BPQ9NSQ0 103 aa35.52■■■■□ 3.28
RUNDC3A-201ENST00000225441 ADGRL2O95490 1459 aa35.52■■■■□ 3.28
RUNDC3A-201ENST00000225441 MAP3K4Q9Y6R4 1608 aa35.49■■■■□ 3.27
RUNDC3A-201ENST00000225441 C9orf84Q5VXU9 1444 aa35.49■■■■□ 3.27
RUNDC3A-201ENST00000225441 TSPY4P0CV99 314 aa35.48■■■■□ 3.27
RUNDC3A-201ENST00000225441 TSPY10P0CW01 314 aa35.48■■■■□ 3.27
RUNDC3A-201ENST00000225441 CFAP74Q9C0B2 1584 aa35.46■■■■□ 3.27
RUNDC3A-201ENST00000225441 NCOA1Q15788 1441 aa35.45■■■■□ 3.27
RUNDC3A-201ENST00000225441 PPP1R15AO75807 674 aaPredicted RBP35.45■■■■□ 3.27
RUNDC3A-201ENST00000225441 SIN3AQ96ST3 1273 aa35.44■■■■□ 3.26
RUNDC3A-201ENST00000225441 ANKRD30AQ9BXX3 1397 aa35.43■■■■□ 3.26
RUNDC3A-201ENST00000225441 MAST1Q9Y2H9 1570 aa35.42■■■■□ 3.26
RUNDC3A-201ENST00000225441 ADGRL1O94910 1474 aa35.42■■■■□ 3.26
RUNDC3A-201ENST00000225441 FAM69CQ0P6D2 419 aa35.41■■■■□ 3.26
RUNDC3A-201ENST00000225441 TRAPPC8Q9Y2L5 1435 aa35.4■■■■□ 3.26
RUNDC3A-201ENST00000225441 SCAPERQ9BY12 1400 aa35.36■■■■□ 3.25
RUNDC3A-201ENST00000225441 NEO1Q92859 1461 aa35.36■■■■□ 3.25
RUNDC3A-201ENST00000225441 KDM6BO15054 1643 aa35.35■■■■□ 3.25
RUNDC3A-201ENST00000225441 KIF13AQ9H1H9 1805 aa35.29■■■■□ 3.24
RUNDC3A-201ENST00000225441 TONSLQ96HA7 1378 aa35.29■■■■□ 3.24
RUNDC3A-201ENST00000225441 PLXNC1O60486 1568 aa35.28■■■■□ 3.24
RUNDC3A-201ENST00000225441 AFAP1Q8N556 730 aa35.27■■■■□ 3.24
RUNDC3A-201ENST00000225441 KIF15Q9NS87 1388 aa35.27■■■■□ 3.24
RUNDC3A-201ENST00000225441 SPAG9O60271 1321 aaKnown RBP35.23■■■■□ 3.23
RUNDC3A-201ENST00000225441 RTEL1-TNFRSF6BF6WH68 1400 aa35.23■■■■□ 3.23
RUNDC3A-201ENST00000225441 ANKRD50Q9ULJ7 1429 aa35.23■■■■□ 3.23
RUNDC3A-201ENST00000225441 PPRC1Q5VV67 1664 aaKnown RBP35.23■■■■□ 3.23
RUNDC3A-201ENST00000225441 ZFYVE16Q7Z3T8 1539 aa35.22■■■■□ 3.23
RUNDC3A-201ENST00000225441 ZNF518AQ6AHZ1 1483 aa35.21■■■■□ 3.23
RUNDC3A-201ENST00000225441 POGZQ7Z3K3 1410 aa35.21■■■■□ 3.23
RUNDC3A-201ENST00000225441 INO80Q9ULG1 1556 aaPredicted RBP35.19■■■■□ 3.22
RUNDC3A-201ENST00000225441 TEX14Q8IWB6 1497 aa35.18■■■■□ 3.22
RUNDC3A-201ENST00000225441 TSPOAP1O95153 1857 aa35.18■■■■□ 3.22
RUNDC3A-201ENST00000225441 CCER2I3L3R5 266 aa35.18■■■■□ 3.22
RUNDC3A-201ENST00000225441 ATP7AQ04656 1500 aa35.16■■■■□ 3.22
RUNDC3A-201ENST00000225441 DENND4BO75064 1496 aaPredicted RBP35.15■■■■□ 3.22
RUNDC3A-201ENST00000225441 KDM5CP41229 1560 aa35.14■■■■□ 3.22
RUNDC3A-201ENST00000225441 DDX10Q13206 875 aaKnown RBP35.13■■■■□ 3.21
RUNDC3A-201ENST00000225441 DUOX2Q9NRD8 1548 aa35.13■■■■□ 3.21
RUNDC3A-201ENST00000225441 TRIM52Q96A61 297 aa35.12■■■■□ 3.21
RUNDC3A-201ENST00000225441 SUPT16HQ9Y5B9 1047 aaKnown RBP35.06■■■■□ 3.2
RUNDC3A-201ENST00000225441 KIDINS220Q9ULH0 1771 aa35.06■■■■□ 3.2
RUNDC3A-201ENST00000225441 RICTORQ6R327 1708 aa35.05■■■■□ 3.2
RUNDC3A-201ENST00000225441 MLH3Q9UHC1 1453 aa35.05■■■■□ 3.2
RUNDC3A-201ENST00000225441 ERBINQ96RT1 1412 aa35.05■■■■□ 3.2
RUNDC3A-201ENST00000225441 HECW2Q9P2P5 1572 aa35.04■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms