RNA–Protein interactions for RNA: ENST00000222345.10

SIPA1L3-201, Transcript of signal induced proliferation associated 1 like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1L3, Length 7,987 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-201ENST00000222345 TULP1O00294 542 aaPredicted RBP17.25■□□□□ 0.35
SIPA1L3-201ENST00000222345 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.25■□□□□ 0.35
SIPA1L3-201ENST00000222345 SPRYD3Q8NCJ5 442 aa17.25■□□□□ 0.35
SIPA1L3-201ENST00000222345 SLKQ9H2G2 1235 aaPredicted RBP17.22■□□□□ 0.35
SIPA1L3-201ENST00000222345 MYO15BQ96JP2 1530 aa17.22■□□□□ 0.35
SIPA1L3-201ENST00000222345 PPP1R15AO75807 674 aaPredicted RBP17.21■□□□□ 0.35
SIPA1L3-201ENST00000222345 APPP05067 770 aa17.21■□□□□ 0.35
SIPA1L3-201ENST00000222345 OS9Q13438 667 aaPredicted RBP17.2■□□□□ 0.34
SIPA1L3-201ENST00000222345 PMFBP1Q8TBY8 1022 aa17.2■□□□□ 0.34
SIPA1L3-201ENST00000222345 KIAA1211Q6ZU35 1233 aa17.19■□□□□ 0.34
SIPA1L3-201ENST00000222345 SCRIBQ14160 1630 aa17.19■□□□□ 0.34
SIPA1L3-201ENST00000222345 GNL2Q13823 731 aaKnown RBP17.19■□□□□ 0.34
SIPA1L3-201ENST00000222345 RWDD1Q9H446 243 aaPredicted RBP17.18■□□□□ 0.34
SIPA1L3-201ENST00000222345 NAP1L2Q9ULW6 460 aaPredicted RBP17.18■□□□□ 0.34
SIPA1L3-201ENST00000222345 CARD11Q9BXL7 1154 aa17.17■□□□□ 0.34
SIPA1L3-201ENST00000222345 IPO8O15397 1037 aaKnown RBP17.17■□□□□ 0.34
SIPA1L3-201ENST00000222345 RCAN3Q9UKA8 241 aa17.16■□□□□ 0.34
SIPA1L3-201ENST00000222345 CCDC70Q6NSX1 233 aa17.15■□□□□ 0.34
SIPA1L3-201ENST00000222345 CCDC66A2RUB6 948 aa17.15■□□□□ 0.34
SIPA1L3-201ENST00000222345 TPM3P06753 285 aa17.14■□□□□ 0.33
SIPA1L3-201ENST00000222345 CHMP7Q8WUX9 453 aaPredicted RBP17.14■□□□□ 0.33
SIPA1L3-201ENST00000222345 KCNH8Q96L42 1107 aa17.14■□□□□ 0.33
SIPA1L3-201ENST00000222345 KIF16BQ96L93 1317 aa17.14■□□□□ 0.33
SIPA1L3-201ENST00000222345 PODXL2Q9NZ53 605 aa17.13■□□□□ 0.33
SIPA1L3-201ENST00000222345 CWC15Q9P013 229 aaKnown RBP17.13■□□□□ 0.33
SIPA1L3-201ENST00000222345 TPM2P07951 284 aa17.12■□□□□ 0.33
SIPA1L3-201ENST00000222345 ZCCHC6Q5VYS8 1495 aaKnown RBP17.11■□□□□ 0.33
SIPA1L3-201ENST00000222345 ST18O60284 1047 aa17.1■□□□□ 0.33
SIPA1L3-201ENST00000222345 FAM43AQ8N2R8 423 aa17.1■□□□□ 0.33
SIPA1L3-201ENST00000222345 FAM13BQ9NYF5 915 aa17.08■□□□□ 0.32
SIPA1L3-201ENST00000222345 NPHP1O15259 732 aa17.07■□□□□ 0.32
SIPA1L3-201ENST00000222345 KTN1Q86UP2 1357 aaKnown RBP17.07■□□□□ 0.32
SIPA1L3-201ENST00000222345 PHLDB1Q86UU1 1377 aa17.07■□□□□ 0.32
SIPA1L3-201ENST00000222345 ATP6V1DQ9Y5K8 247 aa17.07■□□□□ 0.32
SIPA1L3-201ENST00000222345 NEUROD2Q15784 382 aa17.07■□□□□ 0.32
SIPA1L3-201ENST00000222345 CEP164Q9UPV0 1460 aa17.06■□□□□ 0.32
SIPA1L3-201ENST00000222345 RRP7BPQ9NSQ0 103 aa17.05■□□□□ 0.32
SIPA1L3-201ENST00000222345 TAOK2Q9UL54 1235 aa17.05■□□□□ 0.32
SIPA1L3-201ENST00000222345 TNIKQ9UKE5 1360 aa17.05■□□□□ 0.32
SIPA1L3-201ENST00000222345 TAF3Q5VWG9 929 aa17.04■□□□□ 0.32
SIPA1L3-201ENST00000222345 ARGLU1Q9NWB6 273 aaPredicted RBP17.04■□□□□ 0.32
SIPA1L3-201ENST00000222345 KIF3AQ9Y496 699 aa17.04■□□□□ 0.32
SIPA1L3-201ENST00000222345 GOLGA6L19H0YKK7 550 aa17.04■□□□□ 0.32
SIPA1L3-201ENST00000222345 ACBD3Q9H3P7 528 aa17.04■□□□□ 0.32
SIPA1L3-201ENST00000222345 LMOD2Q6P5Q4 547 aa17.04■□□□□ 0.32
SIPA1L3-201ENST00000222345 RALBP1Q15311 655 aa17.03■□□□□ 0.32
SIPA1L3-201ENST00000222345 TMF1P82094 1093 aa17.03■□□□□ 0.32
SIPA1L3-201ENST00000222345 PDE3BQ13370 1112 aa17.03■□□□□ 0.32
SIPA1L3-201ENST00000222345 FAM161AQ3B820 660 aa17.02■□□□□ 0.31
SIPA1L3-201ENST00000222345 DIAPH3Q9NSV4 1193 aa17.02■□□□□ 0.31
SIPA1L3-201ENST00000222345 TSR1Q2NL82 804 aaKnown RBP17.01■□□□□ 0.31
SIPA1L3-201ENST00000222345 GOLGA2Q08379 1002 aa17.01■□□□□ 0.31
SIPA1L3-201ENST00000222345 MFAP1P55081 439 aaKnown RBP17■□□□□ 0.31
SIPA1L3-201ENST00000222345 DDX49Q9Y6V7 483 aaKnown RBP17■□□□□ 0.31
SIPA1L3-201ENST00000222345 CENPQQ7L2Z9 268 aaPredicted RBP17■□□□□ 0.31
SIPA1L3-201ENST00000222345 CHMP4CQ96CF2 233 aa17■□□□□ 0.31
SIPA1L3-201ENST00000222345 CC2D1BQ5T0F9 858 aaKnown RBP17■□□□□ 0.31
SIPA1L3-201ENST00000222345 TPM1P09493 284 aa17■□□□□ 0.31
SIPA1L3-201ENST00000222345 RRP12Q5JTH9 1297 aaKnown RBP17■□□□□ 0.31
SIPA1L3-201ENST00000222345 GPATCH3Q96I76 525 aa17■□□□□ 0.31
SIPA1L3-201ENST00000222345 PRKCSHP14314 528 aaPredicted RBP16.98■□□□□ 0.31
SIPA1L3-201ENST00000222345 RGL3Q3MIN7 710 aa16.98■□□□□ 0.31
SIPA1L3-201ENST00000222345 CCNB3Q8WWL7 1395 aa16.98■□□□□ 0.31
SIPA1L3-201ENST00000222345 SENP3-EIF4A1A0A087X0R7 540 aa16.98■□□□□ 0.31
SIPA1L3-201ENST00000222345 RDXP35241 583 aaKnown RBP16.98■□□□□ 0.31
SIPA1L3-201ENST00000222345 AK7Q96M32 723 aa16.97■□□□□ 0.31
SIPA1L3-201ENST00000222345 RRP9O43818 475 aaKnown RBP16.96■□□□□ 0.31
SIPA1L3-201ENST00000222345 CDR1P51861 262 aa16.96■□□□□ 0.31
SIPA1L3-201ENST00000222345 CHMP4AQ9BY43 222 aa16.95■□□□□ 0.3
SIPA1L3-201ENST00000222345 HMMRO75330 724 aa16.95■□□□□ 0.3
SIPA1L3-201ENST00000222345 CEP89Q96ST8 783 aa16.95■□□□□ 0.3
SIPA1L3-201ENST00000222345 CLSTN1O94985 981 aa16.94■□□□□ 0.3
SIPA1L3-201ENST00000222345 PDE4AP27815 886 aa16.94■□□□□ 0.3
SIPA1L3-201ENST00000222345 HSP90B2PQ58FF3 399 aa16.93■□□□□ 0.3
SIPA1L3-201ENST00000222345 ITPRIPQ8IWB1 547 aa16.93■□□□□ 0.3
SIPA1L3-201ENST00000222345 U2SURPO15042 1029 aaKnown RBP16.92■□□□□ 0.3
SIPA1L3-201ENST00000222345 CCAR2Q8N163 923 aaKnown RBP16.92■□□□□ 0.3
SIPA1L3-201ENST00000222345 CCDC191Q8NCU4 936 aa16.92■□□□□ 0.3
SIPA1L3-201ENST00000222345 BECN2A8MW95 431 aa16.92■□□□□ 0.3
SIPA1L3-201ENST00000222345 CCDC39Q9UFE4 941 aa16.92■□□□□ 0.3
SIPA1L3-201ENST00000222345 FHAD1B1AJZ9 1412 aa16.92■□□□□ 0.3
SIPA1L3-201ENST00000222345 HMGN5P82970 282 aaKnown RBP16.92■□□□□ 0.3
SIPA1L3-201ENST00000222345 SETD5Q9C0A6 1442 aa16.92■□□□□ 0.3
SIPA1L3-201ENST00000222345 MRE11P49959 708 aa16.91■□□□□ 0.3
SIPA1L3-201ENST00000222345 HDAC5Q9UQL6 1122 aa16.91■□□□□ 0.3
SIPA1L3-201ENST00000222345 DCTN1Q14203 1278 aa16.9■□□□□ 0.3
SIPA1L3-201ENST00000222345 NCBP3Q53F19 620 aaKnown RBP16.9■□□□□ 0.3
SIPA1L3-201ENST00000222345 ROCK2O75116 1388 aaKnown RBP16.9■□□□□ 0.3
SIPA1L3-201ENST00000222345 HSP90B1P14625 803 aaKnown RBP16.9■□□□□ 0.3
SIPA1L3-201ENST00000222345 RUFY1Q96T51 708 aa16.9■□□□□ 0.3
SIPA1L3-201ENST00000222345 ZNF592Q92610 1267 aa16.88■□□□□ 0.29
SIPA1L3-201ENST00000222345 CHMP5Q9NZZ3 219 aa16.87■□□□□ 0.29
SIPA1L3-201ENST00000222345 TRHP20396 242 aaPredicted RBP16.87■□□□□ 0.29
SIPA1L3-201ENST00000222345 ERCC4Q92889 916 aaPredicted RBP16.87■□□□□ 0.29
SIPA1L3-201ENST00000222345 SIN3AQ96ST3 1273 aa16.87■□□□□ 0.29
SIPA1L3-201ENST00000222345 IPO7O95373 1038 aaKnown RBP16.86■□□□□ 0.29
SIPA1L3-201ENST00000222345 TPD52L1Q16890 204 aaPredicted RBP16.85■□□□□ 0.29
SIPA1L3-201ENST00000222345 SF3A1Q15459 793 aaKnown RBP16.85■□□□□ 0.29
SIPA1L3-201ENST00000222345 H0YHG0 523 aa16.85■□□□□ 0.29
SIPA1L3-201ENST00000222345 HOMER1Q86YM7 354 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms