RNA–Protein interactions for RNA: ENST00000221996.11

CRX-201, Transcript of cone-rod homeobox, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CRX, Length 4,470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-201ENST00000221996 IFT140Q96RY7 1462 aa13.09□□□□□ -0.31
CRX-201ENST00000221996 RTL5Q5HYW3 569 aaPredicted RBP13.07□□□□□ -0.32
CRX-201ENST00000221996 EFCAB2Q5VUJ9 269 aa13.07□□□□□ -0.32
CRX-201ENST00000221996 SENP3Q9H4L4 574 aaPredicted RBP13.07□□□□□ -0.32
CRX-201ENST00000221996 WDR97A6NE52 1622 aa13.07□□□□□ -0.32
CRX-201ENST00000221996 NAIPQ13075 1403 aa13.07□□□□□ -0.32
CRX-201ENST00000221996 CC2D1BQ5T0F9 858 aaKnown RBP13.06□□□□□ -0.32
CRX-201ENST00000221996 ANP32AP39687 249 aaKnown RBP13.06□□□□□ -0.32
CRX-201ENST00000221996 SNAPC4Q5SXM2 1469 aa13.06□□□□□ -0.32
CRX-201ENST00000221996 NPM2Q86SE8 214 aaKnown RBP13.06□□□□□ -0.32
CRX-201ENST00000221996 CDK13Q14004 1512 aaKnown RBP13.06□□□□□ -0.32
CRX-201ENST00000221996 STAG3Q9UJ98 1225 aa13.05□□□□□ -0.32
CRX-201ENST00000221996 KNSTRNQ9Y448 316 aa13.05□□□□□ -0.32
CRX-201ENST00000221996 RSPH4AQ5TD94 716 aa13.05□□□□□ -0.32
CRX-201ENST00000221996 ROCK2O75116 1388 aaKnown RBP13.05□□□□□ -0.32
CRX-201ENST00000221996 PPP4R2Q9NY27 417 aa13.05□□□□□ -0.32
CRX-201ENST00000221996 EPRSP07814 1512 aaKnown RBP13.04□□□□□ -0.32
CRX-201ENST00000221996 MIA2Q96PC5 1412 aa13.04□□□□□ -0.32
CRX-201ENST00000221996 PRKRIP1Q9H875 184 aaPredicted RBP13.04□□□□□ -0.32
CRX-201ENST00000221996 PRG4Q92954 1404 aaPredicted RBP13.03□□□□□ -0.32
CRX-201ENST00000221996 B4GALNT3Q6L9W6 998 aa13.03□□□□□ -0.32
CRX-201ENST00000221996 TMF1P82094 1093 aa13.03□□□□□ -0.32
CRX-201ENST00000221996 SUPT6HQ7KZ85 1726 aaKnown RBP13.03□□□□□ -0.32
CRX-201ENST00000221996 IQGAP2Q13576 1575 aa13.03□□□□□ -0.32
CRX-201ENST00000221996 CDCA8Q53HL2 280 aa13.03□□□□□ -0.32
CRX-201ENST00000221996 HECW1Q76N89 1606 aa13.03□□□□□ -0.32
CRX-201ENST00000221996 WASHC2AQ641Q2 1341 aa13.02□□□□□ -0.33
CRX-201ENST00000221996 ST20-MTHFSA0A0A6YYL1 179 aa13.02□□□□□ -0.33
CRX-201ENST00000221996 KIAA0586Q9BVV6 1533 aa13.01□□□□□ -0.33
CRX-201ENST00000221996 USP47Q96K76 1375 aa13□□□□□ -0.33
CRX-201ENST00000221996 ANKRD50Q9ULJ7 1429 aa13□□□□□ -0.33
CRX-201ENST00000221996 TROQ12816 1431 aaPredicted RBP12.99□□□□□ -0.33
CRX-201ENST00000221996 ZNF608Q9ULD9 1512 aaPredicted RBP12.99□□□□□ -0.33
CRX-201ENST00000221996 TSHZ2Q9NRE2 1034 aa12.99□□□□□ -0.33
CRX-201ENST00000221996 ESF1Q9H501 851 aaKnown RBP12.98□□□□□ -0.33
CRX-201ENST00000221996 KIF15Q9NS87 1388 aa12.98□□□□□ -0.33
CRX-201ENST00000221996 CCDC7Q96M83 1385 aa12.98□□□□□ -0.33
CRX-201ENST00000221996 KANK1Q14678 1352 aa12.98□□□□□ -0.33
CRX-201ENST00000221996 NBPF8Q3BBV2 869 aa12.98□□□□□ -0.33
CRX-201ENST00000221996 SPAG9O60271 1321 aaKnown RBP12.97□□□□□ -0.33
CRX-201ENST00000221996 KIF7Q2M1P5 1343 aa12.97□□□□□ -0.33
CRX-201ENST00000221996 NEFMP07197 916 aa12.97□□□□□ -0.33
CRX-201ENST00000221996 DAPK1P53355 1430 aa12.97□□□□□ -0.33
CRX-201ENST00000221996 MAPKBP1O60336 1514 aa12.96□□□□□ -0.33
CRX-201ENST00000221996 CCDC144AA2RUR9 1427 aa12.96□□□□□ -0.33
CRX-201ENST00000221996 KIF3BO15066 747 aa12.96□□□□□ -0.34
CRX-201ENST00000221996 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.96□□□□□ -0.34
CRX-201ENST00000221996 PTPRKQ15262 1439 aa12.96□□□□□ -0.34
CRX-201ENST00000221996 PTPN23Q9H3S7 1636 aa12.96□□□□□ -0.34
CRX-201ENST00000221996 KTN1Q86UP2 1357 aaKnown RBP12.95□□□□□ -0.34
CRX-201ENST00000221996 RALBP1Q15311 655 aa12.94□□□□□ -0.34
CRX-201ENST00000221996 GGT6Q6P531 493 aa12.94□□□□□ -0.34
CRX-201ENST00000221996 RBM19Q9Y4C8 960 aaKnown RBP12.94□□□□□ -0.34
CRX-201ENST00000221996 CNTLNQ9NXG0 1405 aa12.92□□□□□ -0.34
CRX-201ENST00000221996 GRIN2AQ12879 1464 aa12.92□□□□□ -0.34
CRX-201ENST00000221996 PLB1Q6P1J6 1458 aa12.92□□□□□ -0.34
CRX-201ENST00000221996 SYNJ2O15056 1496 aa12.91□□□□□ -0.34
CRX-201ENST00000221996 TNNT2P45379 298 aaPredicted RBP12.91□□□□□ -0.34
CRX-201ENST00000221996 ABCC5O15440 1437 aa12.9□□□□□ -0.34
CRX-201ENST00000221996 ROCK1Q13464 1354 aa12.9□□□□□ -0.34
CRX-201ENST00000221996 ERICH6BQ5W0A0 696 aa12.9□□□□□ -0.35
CRX-201ENST00000221996 PLPPR3Q6T4P5 718 aa12.9□□□□□ -0.35
CRX-201ENST00000221996 NLRP13Q86W25 1043 aa12.89□□□□□ -0.35
CRX-201ENST00000221996 BCL11AQ9H165 835 aa12.89□□□□□ -0.35
CRX-201ENST00000221996 CTTNBP2Q8WZ74 1663 aa12.89□□□□□ -0.35
CRX-201ENST00000221996 NUDCQ9Y266 331 aa12.89□□□□□ -0.35
CRX-201ENST00000221996 C9orf84Q5VXU9 1444 aa12.89□□□□□ -0.35
CRX-201ENST00000221996 ANP32EQ9BTT0 268 aa12.89□□□□□ -0.35
CRX-201ENST00000221996 ZBTB47Q9UFB7 747 aaPredicted RBP12.89□□□□□ -0.35
CRX-201ENST00000221996 NEUROD2Q15784 382 aa12.88□□□□□ -0.35
CRX-201ENST00000221996 KIAA1107Q9UPP5 1409 aa12.88□□□□□ -0.35
CRX-201ENST00000221996 ZBED9Q6R2W3 1325 aa12.88□□□□□ -0.35
CRX-201ENST00000221996 THOC2Q8NI27 1593 aaKnown RBP12.87□□□□□ -0.35
CRX-201ENST00000221996 CFAP43Q8NDM7 1665 aa12.87□□□□□ -0.35
CRX-201ENST00000221996 ANKRD30BQ9BXX2 1392 aa12.87□□□□□ -0.35
CRX-201ENST00000221996 NBR1Q14596 966 aa12.86□□□□□ -0.35
CRX-201ENST00000221996 MYBBP1AQ9BQG0 1328 aaKnown RBP12.86□□□□□ -0.35
CRX-201ENST00000221996 PANK3Q9H999 370 aa12.86□□□□□ -0.35
CRX-201ENST00000221996 SLC24A1O60721 1099 aa12.86□□□□□ -0.35
CRX-201ENST00000221996 UGGT2Q9NYU1 1516 aa12.85□□□□□ -0.35
CRX-201ENST00000221996 CCDC184Q52MB2 194 aa12.85□□□□□ -0.35
CRX-201ENST00000221996 MAGI1Q96QZ7 1491 aaPredicted RBP12.85□□□□□ -0.35
CRX-201ENST00000221996 C11orf95C9JLR9 678 aaPredicted RBP12.85□□□□□ -0.35
CRX-201ENST00000221996 CFAP53Q96M91 514 aa12.84□□□□□ -0.35
CRX-201ENST00000221996 RCAN3Q9UKA8 241 aa12.84□□□□□ -0.35
CRX-201ENST00000221996 CAMSAP2Q08AD1 1489 aa12.84□□□□□ -0.35
CRX-201ENST00000221996 SAFB2Q14151 953 aaKnown RBP eCLIP12.84□□□□□ -0.35
CRX-201ENST00000221996 AFAP1Q8N556 730 aa12.83□□□□□ -0.36
CRX-201ENST00000221996 ARHGAP5Q13017 1502 aa12.83□□□□□ -0.36
CRX-201ENST00000221996 ARHGEF11O15085 1522 aa12.83□□□□□ -0.36
CRX-201ENST00000221996 AKNAQ7Z591 1439 aa12.82□□□□□ -0.36
CRX-201ENST00000221996 NCOA1Q15788 1441 aa12.82□□□□□ -0.36
CRX-201ENST00000221996 KIF21AQ7Z4S6 1674 aa12.82□□□□□ -0.36
CRX-201ENST00000221996 POGKQ9P215 609 aa12.82□□□□□ -0.36
CRX-201ENST00000221996 ARID4BQ4LE39 1312 aaPredicted RBP12.81□□□□□ -0.36
CRX-201ENST00000221996 NBPF1Q3BBV0 1214 aa12.8□□□□□ -0.36
CRX-201ENST00000221996 MORC1Q86VD1 984 aa12.8□□□□□ -0.36
CRX-201ENST00000221996 NUP153P49790 1475 aaKnown RBP12.8□□□□□ -0.36
CRX-201ENST00000221996 STK26Q9P289 416 aa12.79□□□□□ -0.36
CRX-201ENST00000221996 ADAMTS12P58397 1594 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms