RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 MSH5O43196 834 aa25.53■■□□□ 1.68
CACTIN-201ENST00000221899 CDK11AQ9UQ88 783 aaPredicted RBP25.53■■□□□ 1.68
CACTIN-201ENST00000221899 MRS2Q9HD23 443 aa25.53■■□□□ 1.68
CACTIN-201ENST00000221899 NCOA1Q15788 1441 aa25.51■■□□□ 1.67
CACTIN-201ENST00000221899 ZNF644Q9H582 1327 aaPredicted RBP25.51■■□□□ 1.67
CACTIN-201ENST00000221899 WDR62O43379 1518 aa25.49■■□□□ 1.67
CACTIN-201ENST00000221899 PBRM1Q86U86 1689 aa25.48■■□□□ 1.67
CACTIN-201ENST00000221899 ANKRD30BQ9BXX2 1392 aa25.47■■□□□ 1.67
CACTIN-201ENST00000221899 CNGB1Q14028 1251 aaPredicted RBP25.47■■□□□ 1.67
CACTIN-201ENST00000221899 DAPK1P53355 1430 aa25.46■■□□□ 1.67
CACTIN-201ENST00000221899 SLC4A1APQ9BWU0 796 aaKnown RBP25.46■■□□□ 1.67
CACTIN-201ENST00000221899 KIF7Q2M1P5 1343 aa25.44■■□□□ 1.66
CACTIN-201ENST00000221899 RPRD2Q5VT52 1461 aaKnown RBP25.44■■□□□ 1.66
CACTIN-201ENST00000221899 ADAMTS12P58397 1594 aa25.42■■□□□ 1.66
CACTIN-201ENST00000221899 TEX14Q8IWB6 1497 aa25.42■■□□□ 1.66
CACTIN-201ENST00000221899 ABCC5O15440 1437 aa25.42■■□□□ 1.66
CACTIN-201ENST00000221899 PPP4R2Q9NY27 417 aa25.42■■□□□ 1.66
CACTIN-201ENST00000221899 B4GALNT3Q6L9W6 998 aa25.39■■□□□ 1.66
CACTIN-201ENST00000221899 POLR3GLQ9BT43 218 aa25.38■■□□□ 1.65
CACTIN-201ENST00000221899 ROCK1Q13464 1354 aa25.38■■□□□ 1.65
CACTIN-201ENST00000221899 ZBED9Q6R2W3 1325 aa25.37■■□□□ 1.65
CACTIN-201ENST00000221899 FANCIQ9NVI1 1328 aa25.36■■□□□ 1.65
CACTIN-201ENST00000221899 ZNF326Q5BKZ1 582 aaKnown RBP25.35■■□□□ 1.65
CACTIN-201ENST00000221899 DNMT1P26358 1616 aaKnown RBP25.35■■□□□ 1.65
CACTIN-201ENST00000221899 SPATA31E1Q6ZUB1 1445 aa25.34■■□□□ 1.65
CACTIN-201ENST00000221899 ERICH6BQ5W0A0 696 aa25.34■■□□□ 1.65
CACTIN-201ENST00000221899 NUP153P49790 1475 aaKnown RBP25.3■■□□□ 1.64
CACTIN-201ENST00000221899 SENP3-EIF4A1A0A087X0R7 540 aa25.3■■□□□ 1.64
CACTIN-201ENST00000221899 ERICH6Q7L0X2 663 aa25.3■■□□□ 1.64
CACTIN-201ENST00000221899 ZNF777Q9ULD5 760 aaPredicted RBP25.29■■□□□ 1.64
CACTIN-201ENST00000221899 BCL11AQ9H165 835 aa25.28■■□□□ 1.64
CACTIN-201ENST00000221899 ZNF608Q9ULD9 1512 aaPredicted RBP25.27■■□□□ 1.64
CACTIN-201ENST00000221899 DISP1Q96F81 1524 aa25.27■■□□□ 1.64
CACTIN-201ENST00000221899 KIAA0556O60303 1618 aa25.26■■□□□ 1.63
CACTIN-201ENST00000221899 PZPP20742 1482 aa25.25■■□□□ 1.63
CACTIN-201ENST00000221899 CFDP1Q9UEE9 299 aaPredicted RBP25.25■■□□□ 1.63
CACTIN-201ENST00000221899 PRG4Q92954 1404 aaPredicted RBP25.25■■□□□ 1.63
CACTIN-201ENST00000221899 RAPGEF6Q8TEU7 1601 aa25.21■■□□□ 1.63
CACTIN-201ENST00000221899 POLR1AO95602 1720 aaPredicted RBP25.21■■□□□ 1.63
CACTIN-201ENST00000221899 USP47Q96K76 1375 aa25.21■■□□□ 1.63
CACTIN-201ENST00000221899 CAMSAP2Q08AD1 1489 aa25.2■■□□□ 1.63
CACTIN-201ENST00000221899 MRC2Q9UBG0 1479 aa25.2■■□□□ 1.63
CACTIN-201ENST00000221899 KIAA0586Q9BVV6 1533 aa25.2■■□□□ 1.63
CACTIN-201ENST00000221899 PKD2Q13563 968 aa25.2■■□□□ 1.62
CACTIN-201ENST00000221899 DHX29Q7Z478 1369 aaKnown RBP25.2■■□□□ 1.62
CACTIN-201ENST00000221899 BCORL1Q5H9F3 1711 aa25.16■■□□□ 1.62
CACTIN-201ENST00000221899 KIAA1107Q9UPP5 1409 aa25.15■■□□□ 1.62
CACTIN-201ENST00000221899 MBD5Q9P267 1494 aa25.14■■□□□ 1.62
CACTIN-201ENST00000221899 TROQ12816 1431 aaPredicted RBP25.14■■□□□ 1.61
CACTIN-201ENST00000221899 PLB1Q6P1J6 1458 aa25.12■■□□□ 1.61
CACTIN-201ENST00000221899 SMG6Q86US8 1419 aaKnown RBP25.11■■□□□ 1.61
CACTIN-201ENST00000221899 GPATCH8Q9UKJ3 1502 aaKnown RBP25.11■■□□□ 1.61
CACTIN-201ENST00000221899 NUDCQ9Y266 331 aa25.1■■□□□ 1.61
CACTIN-201ENST00000221899 KIF14Q15058 1648 aa25.09■■□□□ 1.61
CACTIN-201ENST00000221899 IFT140Q96RY7 1462 aa25.09■■□□□ 1.61
CACTIN-201ENST00000221899 GRIN2AQ12879 1464 aa25.09■■□□□ 1.61
CACTIN-201ENST00000221899 ADGBQ8N7X0 1667 aa25.07■■□□□ 1.6
CACTIN-201ENST00000221899 KDM2AQ9Y2K7 1162 aa25.06■■□□□ 1.6
CACTIN-201ENST00000221899 ANKRD30AQ9BXX3 1397 aa25.06■■□□□ 1.6
CACTIN-201ENST00000221899 KDM5CP41229 1560 aa25.05■■□□□ 1.6
CACTIN-201ENST00000221899 TMC1Q8TDI8 760 aa25.05■■□□□ 1.6
CACTIN-201ENST00000221899 CARD11Q9BXL7 1154 aa25.05■■□□□ 1.6
CACTIN-201ENST00000221899 FBLN2P98095 1184 aa25.05■■□□□ 1.6
CACTIN-201ENST00000221899 ITSN2Q9NZM3 1697 aa25.04■■□□□ 1.6
CACTIN-201ENST00000221899 ANKRD50Q9ULJ7 1429 aa25.04■■□□□ 1.6
CACTIN-201ENST00000221899 CCDC136Q96JN2 1154 aa25.04■■□□□ 1.6
CACTIN-201ENST00000221899 PNISRQ8TF01 805 aaKnown RBP25.02■■□□□ 1.6
CACTIN-201ENST00000221899 NUP155O75694 1391 aa25.02■■□□□ 1.6
CACTIN-201ENST00000221899 ADGRL2O95490 1459 aa25.02■■□□□ 1.6
CACTIN-201ENST00000221899 CHMP7Q8WUX9 453 aaPredicted RBP25■■□□□ 1.59
CACTIN-201ENST00000221899 CROCC2H7BZ55 1655 aa25■■□□□ 1.59
CACTIN-201ENST00000221899 EIF4G3O43432 1585 aaKnown RBP24.98■■□□□ 1.59
CACTIN-201ENST00000221899 ST20-MTHFSA0A0A6YYL1 179 aa24.98■■□□□ 1.59
CACTIN-201ENST00000221899 ARID4BQ4LE39 1312 aaPredicted RBP24.97■■□□□ 1.59
CACTIN-201ENST00000221899 RNF123Q5XPI4 1314 aa24.97■■□□□ 1.59
CACTIN-201ENST00000221899 RALGAPBQ86X10 1494 aa24.95■■□□□ 1.58
CACTIN-201ENST00000221899 DCAF11Q8TEB1 546 aa24.95■■□□□ 1.58
CACTIN-201ENST00000221899 ROCK2O75116 1388 aaKnown RBP24.93■■□□□ 1.58
CACTIN-201ENST00000221899 CEP170Q5SW79 1584 aa24.93■■□□□ 1.58
CACTIN-201ENST00000221899 NOP58Q9Y2X3 529 aaKnown RBP24.93■■□□□ 1.58
CACTIN-201ENST00000221899 UHRF1BP1Q6BDS2 1440 aa24.93■■□□□ 1.58
CACTIN-201ENST00000221899 PAK3O75914 559 aaPredicted RBP24.93■■□□□ 1.58
CACTIN-201ENST00000221899 ADCY10Q96PN6 1610 aa24.92■■□□□ 1.58
CACTIN-201ENST00000221899 KIF15Q9NS87 1388 aa24.92■■□□□ 1.58
CACTIN-201ENST00000221899 C9orf84Q5VXU9 1444 aa24.92■■□□□ 1.58
CACTIN-201ENST00000221899 SALL2Q9Y467 1007 aaPredicted RBP24.92■■□□□ 1.58
CACTIN-201ENST00000221899 PLEKHD1A6NEE1 506 aa24.91■■□□□ 1.58
CACTIN-201ENST00000221899 JPH4Q96JJ6 628 aa24.89■■□□□ 1.58
CACTIN-201ENST00000221899 TSPY4P0CV99 314 aa24.88■■□□□ 1.57
CACTIN-201ENST00000221899 TSPY10P0CW01 314 aa24.88■■□□□ 1.57
CACTIN-201ENST00000221899 HNRNPMP52272 730 aaKnown RBP eCLIP24.88■■□□□ 1.57
CACTIN-201ENST00000221899 NBR1Q14596 966 aa24.88■■□□□ 1.57
CACTIN-201ENST00000221899 CDC42BPAQ5VT25 1732 aa24.87■■□□□ 1.57
CACTIN-201ENST00000221899 MYBBP1AQ9BQG0 1328 aaKnown RBP24.86■■□□□ 1.57
CACTIN-201ENST00000221899 CARMIL2Q6F5E8 1435 aa24.86■■□□□ 1.57
CACTIN-201ENST00000221899 LRPPRCP42704 1394 aaKnown RBP24.84■■□□□ 1.57
CACTIN-201ENST00000221899 ARHGEF12Q9NZN5 1544 aa24.83■■□□□ 1.57
CACTIN-201ENST00000221899 SYNJ2O15056 1496 aa24.82■■□□□ 1.56
CACTIN-201ENST00000221899 MAGI1Q96QZ7 1491 aaPredicted RBP24.82■■□□□ 1.56
CACTIN-201ENST00000221899 BRD4O60885 1362 aaPredicted RBP24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms