RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 PREX2Q70Z35 1606 aa22.55■■□□□ 1.2
PAF1-201ENST00000221265 SETD5Q9C0A6 1442 aa22.55■■□□□ 1.2
PAF1-201ENST00000221265 CHIC2Q9UKJ5 165 aa22.53■■□□□ 1.2
PAF1-201ENST00000221265 DNMT1P26358 1616 aaKnown RBP22.53■■□□□ 1.2
PAF1-201ENST00000221265 WDR7Q9Y4E6 1490 aa22.52■■□□□ 1.2
PAF1-201ENST00000221265 MYO5CQ9NQX4 1742 aa22.51■■□□□ 1.19
PAF1-201ENST00000221265 DAPK1P53355 1430 aa22.51■■□□□ 1.19
PAF1-201ENST00000221265 CYB5RLQ6IPT4 315 aa22.51■■□□□ 1.19
PAF1-201ENST00000221265 ABCC5O15440 1437 aa22.5■■□□□ 1.19
PAF1-201ENST00000221265 ASXL2Q76L83 1435 aa22.5■■□□□ 1.19
PAF1-201ENST00000221265 HFM1A2PYH4 1435 aa22.47■■□□□ 1.19
PAF1-201ENST00000221265 SAMD9LQ8IVG5 1584 aa22.47■■□□□ 1.19
PAF1-201ENST00000221265 DHX57Q6P158 1386 aaKnown RBP22.46■■□□□ 1.19
PAF1-201ENST00000221265 NPM1P06748 294 aaKnown RBP eCLIP22.46■■□□□ 1.19
PAF1-201ENST00000221265 NAIPQ13075 1403 aa22.46■■□□□ 1.19
PAF1-201ENST00000221265 RRP7BPQ9NSQ0 103 aa22.46■■□□□ 1.19
PAF1-201ENST00000221265 ARHGAP5Q13017 1502 aa22.46■■□□□ 1.19
PAF1-201ENST00000221265 CROCC2H7BZ55 1655 aa22.44■■□□□ 1.18
PAF1-201ENST00000221265 GCC2Q8IWJ2 1684 aa22.41■■□□□ 1.18
PAF1-201ENST00000221265 PLCH2O75038 1416 aa22.41■■□□□ 1.18
PAF1-201ENST00000221265 HNRNPMP52272 730 aaKnown RBP eCLIP22.4■■□□□ 1.18
PAF1-201ENST00000221265 ABCA9Q8IUA7 1624 aa22.39■■□□□ 1.18
PAF1-201ENST00000221265 AKNAQ7Z591 1439 aa22.39■■□□□ 1.18
PAF1-201ENST00000221265 KDM6BO15054 1643 aa22.39■■□□□ 1.17
PAF1-201ENST00000221265 MBD5Q9P267 1494 aa22.38■■□□□ 1.17
PAF1-201ENST00000221265 SYCP2Q9BX26 1530 aa22.37■■□□□ 1.17
PAF1-201ENST00000221265 ADGBQ8N7X0 1667 aa22.36■■□□□ 1.17
PAF1-201ENST00000221265 ARHGEF5Q12774 1597 aa22.35■■□□□ 1.17
PAF1-201ENST00000221265 ROCK1Q13464 1354 aa22.35■■□□□ 1.17
PAF1-201ENST00000221265 ARHGEF12Q9NZN5 1544 aa22.33■■□□□ 1.16
PAF1-201ENST00000221265 EFCAB2Q5VUJ9 269 aa22.32■■□□□ 1.16
PAF1-201ENST00000221265 NCOA1Q15788 1441 aa22.32■■□□□ 1.16
PAF1-201ENST00000221265 C9orf84Q5VXU9 1444 aa22.31■■□□□ 1.16
PAF1-201ENST00000221265 ADGRL2O95490 1459 aa22.3■■□□□ 1.16
PAF1-201ENST00000221265 CCDC141Q6ZP82 1450 aa22.3■■□□□ 1.16
PAF1-201ENST00000221265 ARAP3Q8WWN8 1544 aa22.3■■□□□ 1.16
PAF1-201ENST00000221265 SHANK2Q9UPX8 1470 aa22.3■■□□□ 1.16
PAF1-201ENST00000221265 MAPKBP1O60336 1514 aa22.3■■□□□ 1.16
PAF1-201ENST00000221265 ABCC1P33527 1531 aa22.28■■□□□ 1.16
PAF1-201ENST00000221265 KIAA1107Q9UPP5 1409 aa22.28■■□□□ 1.16
PAF1-201ENST00000221265 PLEKHH2Q8IVE3 1493 aa22.27■■□□□ 1.16
PAF1-201ENST00000221265 FANCAO15360 1455 aa22.27■■□□□ 1.15
PAF1-201ENST00000221265 TSPY4P0CV99 314 aa22.26■■□□□ 1.15
PAF1-201ENST00000221265 TSPY10P0CW01 314 aa22.26■■□□□ 1.15
PAF1-201ENST00000221265 ANKRD30AQ9BXX3 1397 aa22.25■■□□□ 1.15
PAF1-201ENST00000221265 CLSPNQ9HAW4 1339 aa22.24■■□□□ 1.15
PAF1-201ENST00000221265 TRAPPC8Q9Y2L5 1435 aa22.23■■□□□ 1.15
PAF1-201ENST00000221265 CD109Q6YHK3 1445 aa22.22■■□□□ 1.15
PAF1-201ENST00000221265 RSPH4AQ5TD94 716 aa22.22■■□□□ 1.15
PAF1-201ENST00000221265 MAST1Q9Y2H9 1570 aa22.19■■□□□ 1.14
PAF1-201ENST00000221265 TRIM52Q96A61 297 aa22.19■■□□□ 1.14
PAF1-201ENST00000221265 KIF15Q9NS87 1388 aa22.18■■□□□ 1.14
PAF1-201ENST00000221265 ADGRL1O94910 1474 aa22.17■■□□□ 1.14
PAF1-201ENST00000221265 ANKRD50Q9ULJ7 1429 aa22.17■■□□□ 1.14
PAF1-201ENST00000221265 AFAP1Q8N556 730 aa22.16■■□□□ 1.14
PAF1-201ENST00000221265 DENND4BO75064 1496 aaPredicted RBP22.15■■□□□ 1.14
PAF1-201ENST00000221265 MAP3K4Q9Y6R4 1608 aa22.14■■□□□ 1.14
PAF1-201ENST00000221265 SCAPERQ9BY12 1400 aa22.14■■□□□ 1.13
PAF1-201ENST00000221265 DIP2BQ9P265 1576 aa22.13■■□□□ 1.13
PAF1-201ENST00000221265 PLXNC1O60486 1568 aa22.12■■□□□ 1.13
PAF1-201ENST00000221265 GLI2P10070 1586 aa22.12■■□□□ 1.13
PAF1-201ENST00000221265 SIN3AQ96ST3 1273 aa22.11■■□□□ 1.13
PAF1-201ENST00000221265 CFAP74Q9C0B2 1584 aa22.1■■□□□ 1.13
PAF1-201ENST00000221265 FAM69CQ0P6D2 419 aa22.09■■□□□ 1.13
PAF1-201ENST00000221265 DIEXFQ68CQ4 756 aaKnown RBP22.09■■□□□ 1.13
PAF1-201ENST00000221265 MPHOSPH9Q99550 1183 aa22.09■■□□□ 1.13
PAF1-201ENST00000221265 ZFYVE16Q7Z3T8 1539 aa22.09■■□□□ 1.13
PAF1-201ENST00000221265 SPAG9O60271 1321 aaKnown RBP22.08■■□□□ 1.13
PAF1-201ENST00000221265 TSPOAP1O95153 1857 aa22.07■■□□□ 1.12
PAF1-201ENST00000221265 PZPP20742 1482 aa22.06■■□□□ 1.12
PAF1-201ENST00000221265 NEUROD1Q13562 356 aa22.06■■□□□ 1.12
PAF1-201ENST00000221265 INO80Q9ULG1 1556 aaPredicted RBP22.06■■□□□ 1.12
PAF1-201ENST00000221265 FOXD1Q16676 465 aa22.05■■□□□ 1.12
PAF1-201ENST00000221265 ZNF316A6NFI3 1004 aaPredicted RBP22.05■■□□□ 1.12
PAF1-201ENST00000221265 KIF13AQ9H1H9 1805 aa22.03■■□□□ 1.12
PAF1-201ENST00000221265 ATP7AQ04656 1500 aa22.03■■□□□ 1.12
PAF1-201ENST00000221265 RTEL1-TNFRSF6BF6WH68 1400 aa22.03■■□□□ 1.12
PAF1-201ENST00000221265 NEO1Q92859 1461 aa22.03■■□□□ 1.12
PAF1-201ENST00000221265 DUOX2Q9NRD8 1548 aa22.02■■□□□ 1.12
PAF1-201ENST00000221265 SLC4A1APQ9BWU0 796 aaKnown RBP22.02■■□□□ 1.12
PAF1-201ENST00000221265 PPRC1Q5VV67 1664 aaKnown RBP22.01■■□□□ 1.11
PAF1-201ENST00000221265 KIDINS220Q9ULH0 1771 aa22.01■■□□□ 1.11
PAF1-201ENST00000221265 ZNF518AQ6AHZ1 1483 aa22.01■■□□□ 1.11
PAF1-201ENST00000221265 POGZQ7Z3K3 1410 aa22■■□□□ 1.11
PAF1-201ENST00000221265 ACIN1Q9UKV3 1341 aaKnown RBP22■■□□□ 1.11
PAF1-201ENST00000221265 NUP155O75694 1391 aa22■■□□□ 1.11
PAF1-201ENST00000221265 KDM5CP41229 1560 aa21.98■■□□□ 1.11
PAF1-201ENST00000221265 MYT1LQ9UL68 1186 aa21.97■■□□□ 1.11
PAF1-201ENST00000221265 KDM5DQ9BY66 1539 aa21.97■■□□□ 1.11
PAF1-201ENST00000221265 RAPGEF3O95398 923 aa21.97■■□□□ 1.11
PAF1-201ENST00000221265 ERBINQ96RT1 1412 aa21.96■■□□□ 1.11
PAF1-201ENST00000221265 UNC13BO14795 1591 aa21.96■■□□□ 1.11
PAF1-201ENST00000221265 RICTORQ6R327 1708 aa21.94■■□□□ 1.1
PAF1-201ENST00000221265 ANKRD30BQ9BXX2 1392 aa21.92■■□□□ 1.1
PAF1-201ENST00000221265 PKD2Q13563 968 aa21.92■■□□□ 1.1
PAF1-201ENST00000221265 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.92■■□□□ 1.14e-9■■■■■ 29.1
PAF1-201ENST00000221265 HECW2Q9P2P5 1572 aa21.92■■□□□ 1.1
PAF1-201ENST00000221265 FAM135AQ9P2D6 1515 aa21.91■■□□□ 1.1
PAF1-201ENST00000221265 MLH3Q9UHC1 1453 aa21.89■■□□□ 1.1
PAF1-201ENST00000221265 FRMPD1Q5SYB0 1578 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms