RNA–Protein interactions for RNA: ENST00000220003.13

CSK-201, Transcript of C-terminal Src kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSK, Length 2,767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSK-201ENST00000220003 CFDP1Q9UEE9 299 aaPredicted RBP26.11■■□□□ 1.77
CSK-201ENST00000220003 KIF14Q15058 1648 aa26.07■■□□□ 1.76
CSK-201ENST00000220003 CHD1O14646 1710 aa26.04■■□□□ 1.76
CSK-201ENST00000220003 TCOF1Q13428 1488 aaKnown RBP26.04■■□□□ 1.76
CSK-201ENST00000220003 UACAQ9BZF9 1416 aa26.03■■□□□ 1.76
CSK-201ENST00000220003 PLEKHD1A6NEE1 506 aa26.03■■□□□ 1.76
CSK-201ENST00000220003 MSH5O43196 834 aa26.02■■□□□ 1.76
CSK-201ENST00000220003 NEFLP07196 543 aa26.02■■□□□ 1.76
CSK-201ENST00000220003 TROQ12816 1431 aaPredicted RBP26.02■■□□□ 1.76
CSK-201ENST00000220003 PTPRGP23470 1445 aa26.01■■□□□ 1.75
CSK-201ENST00000220003 ABCC5O15440 1437 aa26■■□□□ 1.75
CSK-201ENST00000220003 PPP1R15AO75807 674 aaPredicted RBP26■■□□□ 1.75
CSK-201ENST00000220003 ERCC6L2Q5T890 1561 aa26■■□□□ 1.75
CSK-201ENST00000220003 ATP10BO94823 1461 aa25.99■■□□□ 1.75
CSK-201ENST00000220003 MIA2Q96PC5 1412 aa25.99■■□□□ 1.75
CSK-201ENST00000220003 DAPK1P53355 1430 aa25.99■■□□□ 1.75
CSK-201ENST00000220003 TONSLQ96HA7 1378 aa25.98■■□□□ 1.75
CSK-201ENST00000220003 MPHOSPH9Q99550 1183 aa25.96■■□□□ 1.75
CSK-201ENST00000220003 DDX10Q13206 875 aaKnown RBP25.96■■□□□ 1.75
CSK-201ENST00000220003 GPATCH8Q9UKJ3 1502 aaKnown RBP25.95■■□□□ 1.74
CSK-201ENST00000220003 DENND4BO75064 1496 aaPredicted RBP25.94■■□□□ 1.74
CSK-201ENST00000220003 HNRNPMP52272 730 aaKnown RBP eCLIP25.92■■□□□ 1.74
CSK-201ENST00000220003 CAMSAP2Q08AD1 1489 aa25.91■■□□□ 1.74
CSK-201ENST00000220003 ABCA8O94911 1581 aa25.89■■□□□ 1.74
CSK-201ENST00000220003 SLC4A1APQ9BWU0 796 aaKnown RBP25.86■■□□□ 1.73
CSK-201ENST00000220003 GCC2Q8IWJ2 1684 aa25.82■■□□□ 1.72
CSK-201ENST00000220003 DNMT1P26358 1616 aaKnown RBP25.82■■□□□ 1.72
CSK-201ENST00000220003 ERICH6Q7L0X2 663 aa25.81■■□□□ 1.72
CSK-201ENST00000220003 PRKCSHP14314 528 aaPredicted RBP25.8■■□□□ 1.72
CSK-201ENST00000220003 L3MBTL2Q969R5 705 aa25.78■■□□□ 1.72
CSK-201ENST00000220003 AKNAQ7Z591 1439 aa25.78■■□□□ 1.72
CSK-201ENST00000220003 NCOA1Q15788 1441 aa25.75■■□□□ 1.71
CSK-201ENST00000220003 CDC42BPAQ5VT25 1732 aa25.74■■□□□ 1.71
CSK-201ENST00000220003 ABCC10Q5T3U5 1492 aa25.74■■□□□ 1.71
CSK-201ENST00000220003 TIMELESSQ9UNS1 1208 aa25.73■■□□□ 1.71
CSK-201ENST00000220003 FANCIQ9NVI1 1328 aa25.73■■□□□ 1.71
CSK-201ENST00000220003 ROCK1Q13464 1354 aa25.72■■□□□ 1.71
CSK-201ENST00000220003 KDM5BQ9UGL1 1544 aa25.7■■□□□ 1.7
CSK-201ENST00000220003 ZNF326Q5BKZ1 582 aaKnown RBP25.69■■□□□ 1.7
CSK-201ENST00000220003 ITSN2Q9NZM3 1697 aa25.69■■□□□ 1.7
CSK-201ENST00000220003 ADCY10Q96PN6 1610 aa25.69■■□□□ 1.7
CSK-201ENST00000220003 TSPY4P0CV99 314 aa25.68■■□□□ 1.7
CSK-201ENST00000220003 TSPY10P0CW01 314 aa25.68■■□□□ 1.7
CSK-201ENST00000220003 PKD2Q13563 968 aa25.68■■□□□ 1.7
CSK-201ENST00000220003 NBPF8Q3BBV2 869 aa25.65■■□□□ 1.7
CSK-201ENST00000220003 ANKRD30BQ9BXX2 1392 aa25.64■■□□□ 1.69
CSK-201ENST00000220003 ANKRD30AQ9BXX3 1397 aa25.64■■□□□ 1.69
CSK-201ENST00000220003 C9orf84Q5VXU9 1444 aa25.63■■□□□ 1.69
CSK-201ENST00000220003 SHROOM2Q13796 1616 aa25.62■■□□□ 1.69
CSK-201ENST00000220003 HSPA5P11021 654 aaKnown RBP25.62■■□□□ 1.69
CSK-201ENST00000220003 ANKRD50Q9ULJ7 1429 aa25.62■■□□□ 1.69
CSK-201ENST00000220003 IRX6P78412 446 aaPredicted RBP25.61■■□□□ 1.69
CSK-201ENST00000220003 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.61■■□□□ 1.694e-6■■■□□ 15.6
CSK-201ENST00000220003 PZPP20742 1482 aa25.61■■□□□ 1.69
CSK-201ENST00000220003 CCER2I3L3R5 266 aa25.61■■□□□ 1.69
CSK-201ENST00000220003 NUP155O75694 1391 aa25.6■■□□□ 1.69
CSK-201ENST00000220003 ANP32CO43423 234 aa25.6■■□□□ 1.69
CSK-201ENST00000220003 TTC37Q6PGP7 1564 aa25.59■■□□□ 1.69
CSK-201ENST00000220003 DEKP35659 375 aaKnown RBP25.57■■□□□ 1.68
CSK-201ENST00000220003 CDC42BPBQ9Y5S2 1711 aa25.57■■□□□ 1.68
CSK-201ENST00000220003 KIF15Q9NS87 1388 aa25.56■■□□□ 1.68
CSK-201ENST00000220003 ARHGAP5Q13017 1502 aa25.55■■□□□ 1.68
CSK-201ENST00000220003 SAMD9LQ8IVG5 1584 aa25.55■■□□□ 1.68
CSK-201ENST00000220003 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.54■■□□□ 1.68
CSK-201ENST00000220003 MBD5Q9P267 1494 aa25.54■■□□□ 1.68
CSK-201ENST00000220003 CNGB1Q14028 1251 aaPredicted RBP25.54■■□□□ 1.68
CSK-201ENST00000220003 ABCC2Q92887 1545 aa25.53■■□□□ 1.68
CSK-201ENST00000220003 C11orf95C9JLR9 678 aaPredicted RBP25.53■■□□□ 1.68
CSK-201ENST00000220003 CROCC2H7BZ55 1655 aa25.53■■□□□ 1.68
CSK-201ENST00000220003 CLASP1Q7Z460 1538 aa25.52■■□□□ 1.68
CSK-201ENST00000220003 SYCP2Q9BX26 1530 aa25.52■■□□□ 1.68
CSK-201ENST00000220003 KDM2AQ9Y2K7 1162 aa25.51■■□□□ 1.67
CSK-201ENST00000220003 ADGBQ8N7X0 1667 aa25.51■■□□□ 1.67
CSK-201ENST00000220003 ADGRL2O95490 1459 aa25.49■■□□□ 1.67
CSK-201ENST00000220003 RPRD2Q5VT52 1461 aaKnown RBP25.48■■□□□ 1.67
CSK-201ENST00000220003 MYT1LQ9UL68 1186 aa25.48■■□□□ 1.67
CSK-201ENST00000220003 WASHC2AQ641Q2 1341 aa25.48■■□□□ 1.67
CSK-201ENST00000220003 POLR3GLQ9BT43 218 aa25.46■■□□□ 1.67
CSK-201ENST00000220003 EIF4G2P78344 907 aaKnown RBP eCLIP25.46■■□□□ 1.67
CSK-201ENST00000220003 ZCCHC11Q5TAX3 1644 aaKnown RBP25.44■■□□□ 1.66
CSK-201ENST00000220003 AFAP1Q8N556 730 aa25.44■■□□□ 1.66
CSK-201ENST00000220003 PREX2Q70Z35 1606 aa25.44■■□□□ 1.66
CSK-201ENST00000220003 KIAA1107Q9UPP5 1409 aa25.43■■□□□ 1.66
CSK-201ENST00000220003 TEX14Q8IWB6 1497 aa25.43■■□□□ 1.66
CSK-201ENST00000220003 ARHGEF12Q9NZN5 1544 aa25.43■■□□□ 1.66
CSK-201ENST00000220003 CCDC141Q6ZP82 1450 aa25.42■■□□□ 1.66
CSK-201ENST00000220003 HNRNPUQ00839 825 aaKnown RBP eCLIP25.42■■□□□ 1.66
CSK-201ENST00000220003 RGL3Q3MIN7 710 aa25.41■■□□□ 1.66
CSK-201ENST00000220003 SHANK2Q9UPX8 1470 aa25.35■■□□□ 1.65
CSK-201ENST00000220003 EFCAB2Q5VUJ9 269 aa25.35■■□□□ 1.65
CSK-201ENST00000220003 TRAPPC8Q9Y2L5 1435 aa25.34■■□□□ 1.65
CSK-201ENST00000220003 DCAF11Q8TEB1 546 aa25.34■■□□□ 1.65
CSK-201ENST00000220003 PLEKHH2Q8IVE3 1493 aa25.34■■□□□ 1.65
CSK-201ENST00000220003 NBR1Q14596 966 aa25.34■■□□□ 1.65
CSK-201ENST00000220003 OSCARQ8IYS5 282 aa25.32■■□□□ 1.64
CSK-201ENST00000220003 MYO5CQ9NQX4 1742 aa25.32■■□□□ 1.64
CSK-201ENST00000220003 ARHGEF5Q12774 1597 aa25.31■■□□□ 1.64
CSK-201ENST00000220003 ANO8Q9HCE9 1232 aaPredicted RBP25.31■■□□□ 1.64
CSK-201ENST00000220003 PLCH2O75038 1416 aa25.29■■□□□ 1.64
CSK-201ENST00000220003 CCDC184Q52MB2 194 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms