RNA–Protein interactions for RNA: ENST00000216492.9

CHGA-201, Transcript of chromogranin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGA, Length 2,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-201ENST00000216492 HFM1A2PYH4 1435 aa24.83■■□□□ 1.57
CHGA-201ENST00000216492 CAMSAP2Q08AD1 1489 aa24.82■■□□□ 1.56
CHGA-201ENST00000216492 RRP7BPQ9NSQ0 103 aa24.82■■□□□ 1.56
CHGA-201ENST00000216492 ABCC5O15440 1437 aa24.81■■□□□ 1.56
CHGA-201ENST00000216492 DAPK1P53355 1430 aa24.81■■□□□ 1.56
CHGA-201ENST00000216492 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.79■■□□□ 1.56
CHGA-201ENST00000216492 NAIPQ13075 1403 aa24.78■■□□□ 1.56
CHGA-201ENST00000216492 CDC42BPAQ5VT25 1732 aa24.78■■□□□ 1.56
CHGA-201ENST00000216492 CYB5RLQ6IPT4 315 aa24.76■■□□□ 1.55
CHGA-201ENST00000216492 WDR7Q9Y4E6 1490 aa24.75■■□□□ 1.55
CHGA-201ENST00000216492 DNMT1P26358 1616 aaKnown RBP24.73■■□□□ 1.55
CHGA-201ENST00000216492 HNRNPMP52272 730 aaKnown RBP eCLIP24.73■■□□□ 1.55
CHGA-201ENST00000216492 ROCK1Q13464 1354 aa24.73■■□□□ 1.55
CHGA-201ENST00000216492 TTC37Q6PGP7 1564 aa24.73■■□□□ 1.55
CHGA-201ENST00000216492 ASXL2Q76L83 1435 aa24.72■■□□□ 1.55
CHGA-201ENST00000216492 SCAF1Q9H7N4 1312 aaKnown RBP24.72■■□□□ 1.55
CHGA-201ENST00000216492 AKNAQ7Z591 1439 aa24.71■■□□□ 1.55
CHGA-201ENST00000216492 PLCH2O75038 1416 aa24.7■■□□□ 1.54
CHGA-201ENST00000216492 CENPBP07199 599 aaPredicted RBP24.7■■□□□ 1.54
CHGA-201ENST00000216492 TSPY4P0CV99 314 aa24.7■■□□□ 1.54
CHGA-201ENST00000216492 TSPY10P0CW01 314 aa24.7■■□□□ 1.54
CHGA-201ENST00000216492 RSPH4AQ5TD94 716 aa24.7■■□□□ 1.54
CHGA-201ENST00000216492 ARHGAP5Q13017 1502 aa24.68■■□□□ 1.54
CHGA-201ENST00000216492 PREX2Q70Z35 1606 aa24.68■■□□□ 1.54
CHGA-201ENST00000216492 EFCAB2Q5VUJ9 269 aa24.68■■□□□ 1.54
CHGA-201ENST00000216492 ACIN1Q9UKV3 1341 aaKnown RBP24.67■■□□□ 1.54
CHGA-201ENST00000216492 CDC42BPBQ9Y5S2 1711 aa24.67■■□□□ 1.54
CHGA-201ENST00000216492 MBD5Q9P267 1494 aa24.65■■□□□ 1.54
CHGA-201ENST00000216492 NCOA1Q15788 1441 aa24.64■■□□□ 1.53
CHGA-201ENST00000216492 RIMBP3CA6NJZ7 1639 aa24.63■■□□□ 1.53
CHGA-201ENST00000216492 RIMBP3BA6NNM3 1639 aa24.63■■□□□ 1.53
CHGA-201ENST00000216492 RIMBP3Q9UFD9 1639 aa24.63■■□□□ 1.53
CHGA-201ENST00000216492 SAMD9LQ8IVG5 1584 aa24.62■■□□□ 1.53
CHGA-201ENST00000216492 ANKRD30AQ9BXX3 1397 aa24.61■■□□□ 1.53
CHGA-201ENST00000216492 MYO5CQ9NQX4 1742 aa24.61■■□□□ 1.53
CHGA-201ENST00000216492 KIAA1107Q9UPP5 1409 aa24.6■■□□□ 1.53
CHGA-201ENST00000216492 TRIM52Q96A61 297 aa24.59■■□□□ 1.53
CHGA-201ENST00000216492 PLEKHH2Q8IVE3 1493 aa24.58■■□□□ 1.53
CHGA-201ENST00000216492 C9orf84Q5VXU9 1444 aa24.58■■□□□ 1.53
CHGA-201ENST00000216492 ADGRL2O95490 1459 aa24.58■■□□□ 1.52
CHGA-201ENST00000216492 ARHGEF5Q12774 1597 aa24.57■■□□□ 1.52
CHGA-201ENST00000216492 GCC2Q8IWJ2 1684 aa24.56■■□□□ 1.52
CHGA-201ENST00000216492 CCDC141Q6ZP82 1450 aa24.56■■□□□ 1.52
CHGA-201ENST00000216492 SHANK2Q9UPX8 1470 aa24.56■■□□□ 1.52
CHGA-201ENST00000216492 NEUROD1Q13562 356 aa24.55■■□□□ 1.52
CHGA-201ENST00000216492 MAPKBP1O60336 1514 aa24.54■■□□□ 1.52
CHGA-201ENST00000216492 SYCP2Q9BX26 1530 aa24.54■■□□□ 1.52
CHGA-201ENST00000216492 ARAP3Q8WWN8 1544 aa24.53■■□□□ 1.52
CHGA-201ENST00000216492 ABCA9Q8IUA7 1624 aa24.53■■□□□ 1.52
CHGA-201ENST00000216492 KDM6BO15054 1643 aa24.52■■□□□ 1.52
CHGA-201ENST00000216492 CROCC2H7BZ55 1655 aa24.52■■□□□ 1.52
CHGA-201ENST00000216492 ARHGEF12Q9NZN5 1544 aa24.5■■□□□ 1.51
CHGA-201ENST00000216492 FANCAO15360 1455 aa24.49■■□□□ 1.51
CHGA-201ENST00000216492 MPHOSPH9Q99550 1183 aa24.48■■□□□ 1.51
CHGA-201ENST00000216492 ANKRD50Q9ULJ7 1429 aa24.48■■□□□ 1.51
CHGA-201ENST00000216492 ADGBQ8N7X0 1667 aa24.47■■□□□ 1.51
CHGA-201ENST00000216492 CD109Q6YHK3 1445 aa24.47■■□□□ 1.51
CHGA-201ENST00000216492 SIN3AQ96ST3 1273 aa24.47■■□□□ 1.51
CHGA-201ENST00000216492 KIF15Q9NS87 1388 aa24.47■■□□□ 1.51
CHGA-201ENST00000216492 AFAP1Q8N556 730 aa24.45■■□□□ 1.5
CHGA-201ENST00000216492 ABCC1P33527 1531 aa24.44■■□□□ 1.5
CHGA-201ENST00000216492 TRAPPC8Q9Y2L5 1435 aa24.44■■□□□ 1.5
CHGA-201ENST00000216492 MIER1Q8N108 512 aa24.42■■□□□ 1.5
CHGA-201ENST00000216492 SLC4A1APQ9BWU0 796 aaKnown RBP24.4■■□□□ 1.5
CHGA-201ENST00000216492 SCAPERQ9BY12 1400 aa24.39■■□□□ 1.5
CHGA-201ENST00000216492 SPAG9O60271 1321 aaKnown RBP24.39■■□□□ 1.49
CHGA-201ENST00000216492 MAST1Q9Y2H9 1570 aa24.38■■□□□ 1.49
CHGA-201ENST00000216492 ADGRL1O94910 1474 aa24.37■■□□□ 1.49
CHGA-201ENST00000216492 TIMELESSQ9UNS1 1208 aa24.36■■□□□ 1.49
CHGA-201ENST00000216492 DENND4BO75064 1496 aaPredicted RBP24.35■■□□□ 1.49
CHGA-201ENST00000216492 FAM69CQ0P6D2 419 aa24.34■■□□□ 1.49
CHGA-201ENST00000216492 FOXD1Q16676 465 aa24.33■■□□□ 1.49
CHGA-201ENST00000216492 RTEL1-TNFRSF6BF6WH68 1400 aa24.33■■□□□ 1.49
CHGA-201ENST00000216492 NUP155O75694 1391 aa24.32■■□□□ 1.48
CHGA-201ENST00000216492 MYT1LQ9UL68 1186 aa24.31■■□□□ 1.48
CHGA-201ENST00000216492 GTF3C3Q9Y5Q9 886 aa24.31■■□□□ 1.48
CHGA-201ENST00000216492 PZPP20742 1482 aa24.28■■□□□ 1.48
CHGA-201ENST00000216492 YTHDC1Q96MU7 727 aaKnown RBP24.28■■□□□ 1.48
CHGA-201ENST00000216492 PLXNC1O60486 1568 aa24.27■■□□□ 1.48
CHGA-201ENST00000216492 PKD2Q13563 968 aa24.26■■□□□ 1.47
CHGA-201ENST00000216492 DUOX2Q9NRD8 1548 aa24.26■■□□□ 1.47
CHGA-201ENST00000216492 GLI2P10070 1586 aa24.25■■□□□ 1.47
CHGA-201ENST00000216492 NEO1Q92859 1461 aa24.24■■□□□ 1.47
CHGA-201ENST00000216492 ANKRD30BQ9BXX2 1392 aa24.24■■□□□ 1.47
CHGA-201ENST00000216492 CFAP74Q9C0B2 1584 aa24.23■■□□□ 1.47
CHGA-201ENST00000216492 TONSLQ96HA7 1378 aa24.23■■□□□ 1.47
CHGA-201ENST00000216492 ZNF518AQ6AHZ1 1483 aa24.23■■□□□ 1.47
CHGA-201ENST00000216492 ERBINQ96RT1 1412 aa24.22■■□□□ 1.47
CHGA-201ENST00000216492 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.22■■□□□ 1.47
CHGA-201ENST00000216492 ZFYVE16Q7Z3T8 1539 aa24.21■■□□□ 1.47
CHGA-201ENST00000216492 PPP1R15AO75807 674 aaPredicted RBP24.2■■□□□ 1.46
CHGA-201ENST00000216492 MAP3K4Q9Y6R4 1608 aa24.2■■□□□ 1.46
CHGA-201ENST00000216492 ATP7AQ04656 1500 aa24.19■■□□□ 1.46
CHGA-201ENST00000216492 RAPGEF3O95398 923 aa24.19■■□□□ 1.46
CHGA-201ENST00000216492 POGZQ7Z3K3 1410 aa24.18■■□□□ 1.46
CHGA-201ENST00000216492 DIP2BQ9P265 1576 aa24.17■■□□□ 1.46
CHGA-201ENST00000216492 KDM5DQ9BY66 1539 aa24.17■■□□□ 1.46
CHGA-201ENST00000216492 INO80Q9ULG1 1556 aaPredicted RBP24.14■■□□□ 1.46
CHGA-201ENST00000216492 DHX29Q7Z478 1369 aaKnown RBP24.14■■□□□ 1.46
CHGA-201ENST00000216492 FAM135AQ9P2D6 1515 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms