RNA–Protein interactions for RNA: ENST00000216271.9

HDAC10-201, Transcript of histone deacetylase 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC10, Length 2,687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-201ENST00000216271 MYT1Q01538 1121 aa24.83■■□□□ 1.57
HDAC10-201ENST00000216271 ZNF777Q9ULD5 760 aaPredicted RBP24.8■■□□□ 1.56
HDAC10-201ENST00000216271 ABCC5O15440 1437 aa24.79■■□□□ 1.56
HDAC10-201ENST00000216271 SLC4A1APQ9BWU0 796 aaKnown RBP24.79■■□□□ 1.56
HDAC10-201ENST00000216271 DAPK1P53355 1430 aa24.78■■□□□ 1.56
HDAC10-201ENST00000216271 ZNF326Q5BKZ1 582 aaKnown RBP24.78■■□□□ 1.56
HDAC10-201ENST00000216271 POLR3GLQ9BT43 218 aa24.77■■□□□ 1.56
HDAC10-201ENST00000216271 ANKRD30BQ9BXX2 1392 aa24.75■■□□□ 1.55
HDAC10-201ENST00000216271 ANP32EQ9BTT0 268 aa24.75■■□□□ 1.55
HDAC10-201ENST00000216271 PRG4Q92954 1404 aaPredicted RBP24.75■■□□□ 1.55
HDAC10-201ENST00000216271 DISP1Q96F81 1524 aa24.75■■□□□ 1.55
HDAC10-201ENST00000216271 NUP153P49790 1475 aaKnown RBP24.75■■□□□ 1.55
HDAC10-201ENST00000216271 CCDC7Q96M83 1385 aa24.74■■□□□ 1.55
HDAC10-201ENST00000216271 PRKRIP1Q9H875 184 aaPredicted RBP24.73■■□□□ 1.55
HDAC10-201ENST00000216271 MIA2Q96PC5 1412 aa24.73■■□□□ 1.55
HDAC10-201ENST00000216271 CNTLNQ9NXG0 1405 aa24.73■■□□□ 1.55
HDAC10-201ENST00000216271 FBLN2P98095 1184 aa24.72■■□□□ 1.55
HDAC10-201ENST00000216271 MRS2Q9HD23 443 aa24.7■■□□□ 1.55
HDAC10-201ENST00000216271 KIF7Q2M1P5 1343 aa24.7■■□□□ 1.55
HDAC10-201ENST00000216271 MRC2Q9UBG0 1479 aa24.69■■□□□ 1.54
HDAC10-201ENST00000216271 NCOA1Q15788 1441 aa24.68■■□□□ 1.54
HDAC10-201ENST00000216271 TEX14Q8IWB6 1497 aa24.68■■□□□ 1.54
HDAC10-201ENST00000216271 KIAA0556O60303 1618 aa24.67■■□□□ 1.54
HDAC10-201ENST00000216271 AKNAQ7Z591 1439 aa24.67■■□□□ 1.54
HDAC10-201ENST00000216271 PLB1Q6P1J6 1458 aa24.66■■□□□ 1.54
HDAC10-201ENST00000216271 RPRD2Q5VT52 1461 aaKnown RBP24.66■■□□□ 1.54
HDAC10-201ENST00000216271 MSH5O43196 834 aa24.65■■□□□ 1.54
HDAC10-201ENST00000216271 DNMT1P26358 1616 aaKnown RBP24.63■■□□□ 1.53
HDAC10-201ENST00000216271 CFDP1Q9UEE9 299 aaPredicted RBP24.63■■□□□ 1.53
HDAC10-201ENST00000216271 PZPP20742 1482 aa24.6■■□□□ 1.53
HDAC10-201ENST00000216271 KIF14Q15058 1648 aa24.6■■□□□ 1.53
HDAC10-201ENST00000216271 B4GALNT3Q6L9W6 998 aa24.59■■□□□ 1.53
HDAC10-201ENST00000216271 RAPGEF6Q8TEU7 1601 aa24.59■■□□□ 1.53
HDAC10-201ENST00000216271 KIAA0586Q9BVV6 1533 aa24.58■■□□□ 1.53
HDAC10-201ENST00000216271 SPATA31E1Q6ZUB1 1445 aa24.58■■□□□ 1.53
HDAC10-201ENST00000216271 PKD2Q13563 968 aa24.57■■□□□ 1.52
HDAC10-201ENST00000216271 CAMSAP2Q08AD1 1489 aa24.56■■□□□ 1.52
HDAC10-201ENST00000216271 ROCK1Q13464 1354 aa24.56■■□□□ 1.52
HDAC10-201ENST00000216271 GRIN2AQ12879 1464 aa24.56■■□□□ 1.52
HDAC10-201ENST00000216271 CHMP7Q8WUX9 453 aaPredicted RBP24.54■■□□□ 1.52
HDAC10-201ENST00000216271 EIF4G3O43432 1585 aaKnown RBP24.53■■□□□ 1.52
HDAC10-201ENST00000216271 BCORL1Q5H9F3 1711 aa24.52■■□□□ 1.52
HDAC10-201ENST00000216271 IFT140Q96RY7 1462 aa24.51■■□□□ 1.51
HDAC10-201ENST00000216271 GPATCH8Q9UKJ3 1502 aaKnown RBP24.51■■□□□ 1.51
HDAC10-201ENST00000216271 KDM2AQ9Y2K7 1162 aa24.51■■□□□ 1.51
HDAC10-201ENST00000216271 CDK11AQ9UQ88 783 aaPredicted RBP24.49■■□□□ 1.51
HDAC10-201ENST00000216271 TROQ12816 1431 aaPredicted RBP24.48■■□□□ 1.51
HDAC10-201ENST00000216271 CEP170Q5SW79 1584 aa24.48■■□□□ 1.51
HDAC10-201ENST00000216271 USP47Q96K76 1375 aa24.46■■□□□ 1.51
HDAC10-201ENST00000216271 DHX29Q7Z478 1369 aaKnown RBP24.45■■□□□ 1.5
HDAC10-201ENST00000216271 ZBED9Q6R2W3 1325 aa24.43■■□□□ 1.5
HDAC10-201ENST00000216271 JPH4Q96JJ6 628 aa24.43■■□□□ 1.5
HDAC10-201ENST00000216271 HNRNPMP52272 730 aaKnown RBP eCLIP24.41■■□□□ 1.5
HDAC10-201ENST00000216271 KIAA1107Q9UPP5 1409 aa24.4■■□□□ 1.5
HDAC10-201ENST00000216271 PPP4R2Q9NY27 417 aa24.39■■□□□ 1.49
HDAC10-201ENST00000216271 NUP155O75694 1391 aa24.39■■□□□ 1.49
HDAC10-201ENST00000216271 MBD5Q9P267 1494 aa24.39■■□□□ 1.49
HDAC10-201ENST00000216271 ANKRD50Q9ULJ7 1429 aa24.37■■□□□ 1.49
HDAC10-201ENST00000216271 ERCC6Q03468 1493 aa24.35■■□□□ 1.49
HDAC10-201ENST00000216271 ST20-MTHFSA0A0A6YYL1 179 aa24.34■■□□□ 1.49
HDAC10-201ENST00000216271 CARD11Q9BXL7 1154 aa24.34■■□□□ 1.49
HDAC10-201ENST00000216271 SALL2Q9Y467 1007 aaPredicted RBP24.34■■□□□ 1.49
HDAC10-201ENST00000216271 POLR1AO95602 1720 aaPredicted RBP24.33■■□□□ 1.49
HDAC10-201ENST00000216271 DCAF11Q8TEB1 546 aa24.32■■□□□ 1.48
HDAC10-201ENST00000216271 ANKRD30AQ9BXX3 1397 aa24.32■■□□□ 1.48
HDAC10-201ENST00000216271 ADGBQ8N7X0 1667 aa24.32■■□□□ 1.48
HDAC10-201ENST00000216271 PLEKHD1A6NEE1 506 aa24.31■■□□□ 1.48
HDAC10-201ENST00000216271 CROCC2H7BZ55 1655 aa24.3■■□□□ 1.48
HDAC10-201ENST00000216271 KDM5CP41229 1560 aa24.3■■□□□ 1.48
HDAC10-201ENST00000216271 CDC42BPAQ5VT25 1732 aa24.29■■□□□ 1.48
HDAC10-201ENST00000216271 ITSN2Q9NZM3 1697 aa24.29■■□□□ 1.48
HDAC10-201ENST00000216271 ATP10BO94823 1461 aa24.28■■□□□ 1.48
HDAC10-201ENST00000216271 C9orf84Q5VXU9 1444 aa24.28■■□□□ 1.48
HDAC10-201ENST00000216271 SYNJ2O15056 1496 aa24.28■■□□□ 1.48
HDAC10-201ENST00000216271 RGL3Q3MIN7 710 aa24.28■■□□□ 1.48
HDAC10-201ENST00000216271 ADGRL2O95490 1459 aa24.27■■□□□ 1.48
HDAC10-201ENST00000216271 PNISRQ8TF01 805 aaKnown RBP24.24■■□□□ 1.47
HDAC10-201ENST00000216271 NBPF1Q3BBV0 1214 aa24.22■■□□□ 1.47
HDAC10-201ENST00000216271 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.22■■□□□ 1.473e-7■■□□□ 14.4
HDAC10-201ENST00000216271 ADCY10Q96PN6 1610 aa24.22■■□□□ 1.47
HDAC10-201ENST00000216271 ABCC10Q5T3U5 1492 aa24.22■■□□□ 1.47
HDAC10-201ENST00000216271 TMC1Q8TDI8 760 aa24.22■■□□□ 1.47
HDAC10-201ENST00000216271 MAGI1Q96QZ7 1491 aaPredicted RBP24.22■■□□□ 1.47
HDAC10-201ENST00000216271 TSPY4P0CV99 314 aa24.21■■□□□ 1.47
HDAC10-201ENST00000216271 TSPY10P0CW01 314 aa24.21■■□□□ 1.47
HDAC10-201ENST00000216271 KIF15Q9NS87 1388 aa24.21■■□□□ 1.47
HDAC10-201ENST00000216271 CARMIL2Q6F5E8 1435 aa24.21■■□□□ 1.47
HDAC10-201ENST00000216271 NUDCQ9Y266 331 aa24.2■■□□□ 1.46
HDAC10-201ENST00000216271 FANCIQ9NVI1 1328 aa24.2■■□□□ 1.46
HDAC10-201ENST00000216271 NUP160Q12769 1436 aa24.18■■□□□ 1.46
HDAC10-201ENST00000216271 SMG6Q86US8 1419 aaKnown RBP24.17■■□□□ 1.46
HDAC10-201ENST00000216271 ABCA8O94911 1581 aa24.17■■□□□ 1.46
HDAC10-201ENST00000216271 RALGAPBQ86X10 1494 aa24.16■■□□□ 1.46
HDAC10-201ENST00000216271 ERICH6BQ5W0A0 696 aa24.13■■□□□ 1.45
HDAC10-201ENST00000216271 ROCK2O75116 1388 aaKnown RBP24.13■■□□□ 1.45
HDAC10-201ENST00000216271 UHRF1BP1Q6BDS2 1440 aa24.12■■□□□ 1.45
HDAC10-201ENST00000216271 CCDC136Q96JN2 1154 aa24.1■■□□□ 1.45
HDAC10-201ENST00000216271 ERICH6Q7L0X2 663 aa24.1■■□□□ 1.45
HDAC10-201ENST00000216271 PAK3O75914 559 aaPredicted RBP24.09■■□□□ 1.45
HDAC10-201ENST00000216271 CC2D1BQ5T0F9 858 aaKnown RBP24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms