RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 ROCK1Q13464 1354 aa27.28■■□□□ 1.96
CTSA-201ENST00000191018 CHIC2Q9UKJ5 165 aa27.26■■□□□ 1.95
CTSA-201ENST00000191018 CROCC2H7BZ55 1655 aa27.25■■□□□ 1.95
CTSA-201ENST00000191018 ZCCHC11Q5TAX3 1644 aaKnown RBP27.24■■□□□ 1.95
CTSA-201ENST00000191018 RRP7BPQ9NSQ0 103 aa27.23■■□□□ 1.95
CTSA-201ENST00000191018 KDM5BQ9UGL1 1544 aa27.23■■□□□ 1.95
CTSA-201ENST00000191018 KDM6BO15054 1643 aa27.22■■□□□ 1.95
CTSA-201ENST00000191018 PREX2Q70Z35 1606 aa27.22■■□□□ 1.95
CTSA-201ENST00000191018 ADGBQ8N7X0 1667 aa27.21■■□□□ 1.95
CTSA-201ENST00000191018 CDC42BPBQ9Y5S2 1711 aa27.2■■□□□ 1.95
CTSA-201ENST00000191018 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.16■■□□□ 1.94
CTSA-201ENST00000191018 ADGRL2O95490 1459 aa27.16■■□□□ 1.94
CTSA-201ENST00000191018 TTC37Q6PGP7 1564 aa27.16■■□□□ 1.94
CTSA-201ENST00000191018 ZNF316A6NFI3 1004 aaPredicted RBP27.15■■□□□ 1.94
CTSA-201ENST00000191018 OSCARQ8IYS5 282 aa27.15■■□□□ 1.94
CTSA-201ENST00000191018 ZNF777Q9ULD5 760 aaPredicted RBP27.14■■□□□ 1.94
CTSA-201ENST00000191018 ARHGEF5Q12774 1597 aa27.12■■□□□ 1.93
CTSA-201ENST00000191018 SHANK2Q9UPX8 1470 aa27.12■■□□□ 1.93
CTSA-201ENST00000191018 SAMD9LQ8IVG5 1584 aa27.11■■□□□ 1.93
CTSA-201ENST00000191018 MYO5CQ9NQX4 1742 aa27.11■■□□□ 1.93
CTSA-201ENST00000191018 NCOA1Q15788 1441 aa27.11■■□□□ 1.93
CTSA-201ENST00000191018 ACIN1Q9UKV3 1341 aaKnown RBP27.1■■□□□ 1.93
CTSA-201ENST00000191018 SIN3AQ96ST3 1273 aa27.08■■□□□ 1.93
CTSA-201ENST00000191018 DENND4BO75064 1496 aaPredicted RBP27.07■■□□□ 1.92
CTSA-201ENST00000191018 TIMELESSQ9UNS1 1208 aa27.06■■□□□ 1.92
CTSA-201ENST00000191018 MBD5Q9P267 1494 aa27.06■■□□□ 1.92
CTSA-201ENST00000191018 ANKRD30AQ9BXX3 1397 aa27.02■■□□□ 1.92
CTSA-201ENST00000191018 ARHGAP5Q13017 1502 aa27.02■■□□□ 1.92
CTSA-201ENST00000191018 C9orf84Q5VXU9 1444 aa27.01■■□□□ 1.91
CTSA-201ENST00000191018 NEUROD1Q13562 356 aa26.99■■□□□ 1.91
CTSA-201ENST00000191018 CCDC141Q6ZP82 1450 aa26.98■■□□□ 1.91
CTSA-201ENST00000191018 TRIM52Q96A61 297 aa26.98■■□□□ 1.91
CTSA-201ENST00000191018 PLCH2O75038 1416 aa26.97■■□□□ 1.91
CTSA-201ENST00000191018 RSPH4AQ5TD94 716 aa26.96■■□□□ 1.91
CTSA-201ENST00000191018 DIEXFQ68CQ4 756 aaKnown RBP26.96■■□□□ 1.91
CTSA-201ENST00000191018 KCNH8Q96L42 1107 aa26.96■■□□□ 1.91
CTSA-201ENST00000191018 HNRNPMP52272 730 aaKnown RBP eCLIP26.95■■□□□ 1.9
CTSA-201ENST00000191018 MPHOSPH9Q99550 1183 aa26.95■■□□□ 1.9
CTSA-201ENST00000191018 SYCP2Q9BX26 1530 aa26.95■■□□□ 1.9
CTSA-201ENST00000191018 PLEKHH2Q8IVE3 1493 aa26.94■■□□□ 1.9
CTSA-201ENST00000191018 WDR7Q9Y4E6 1490 aa26.94■■□□□ 1.9
CTSA-201ENST00000191018 KIAA1107Q9UPP5 1409 aa26.94■■□□□ 1.9
CTSA-201ENST00000191018 MAST1Q9Y2H9 1570 aa26.93■■□□□ 1.9
CTSA-201ENST00000191018 TSPY4P0CV99 314 aa26.93■■□□□ 1.9
CTSA-201ENST00000191018 TSPY10P0CW01 314 aa26.93■■□□□ 1.9
CTSA-201ENST00000191018 ARAP3Q8WWN8 1544 aa26.92■■□□□ 1.9
CTSA-201ENST00000191018 ANKRD50Q9ULJ7 1429 aa26.91■■□□□ 1.9
CTSA-201ENST00000191018 PZPP20742 1482 aa26.88■■□□□ 1.89
CTSA-201ENST00000191018 ABCA9Q8IUA7 1624 aa26.87■■□□□ 1.89
CTSA-201ENST00000191018 TONSLQ96HA7 1378 aa26.85■■□□□ 1.89
CTSA-201ENST00000191018 PPP1R15AO75807 674 aaPredicted RBP26.85■■□□□ 1.89
CTSA-201ENST00000191018 ABCC1P33527 1531 aa26.85■■□□□ 1.89
CTSA-201ENST00000191018 ARHGEF12Q9NZN5 1544 aa26.85■■□□□ 1.89
CTSA-201ENST00000191018 KIF15Q9NS87 1388 aa26.84■■□□□ 1.89
CTSA-201ENST00000191018 EFCAB2Q5VUJ9 269 aa26.83■■□□□ 1.88
CTSA-201ENST00000191018 ASXL2Q76L83 1435 aa26.83■■□□□ 1.88
CTSA-201ENST00000191018 PLXNC1O60486 1568 aa26.81■■□□□ 1.88
CTSA-201ENST00000191018 KDM5DQ9BY66 1539 aa26.81■■□□□ 1.88
CTSA-201ENST00000191018 ANKRD30BQ9BXX2 1392 aa26.8■■□□□ 1.88
CTSA-201ENST00000191018 SLC4A1APQ9BWU0 796 aaKnown RBP26.79■■□□□ 1.88
CTSA-201ENST00000191018 FOXD1Q16676 465 aa26.74■■□□□ 1.87
CTSA-201ENST00000191018 RPRD2Q5VT52 1461 aaKnown RBP26.73■■□□□ 1.87
CTSA-201ENST00000191018 NPM1P06748 294 aaKnown RBP eCLIP26.7■■□□□ 1.87
CTSA-201ENST00000191018 TRAPPC8Q9Y2L5 1435 aa26.7■■□□□ 1.87
CTSA-201ENST00000191018 FANCAO15360 1455 aa26.69■■□□□ 1.86
CTSA-201ENST00000191018 UNC13BO14795 1591 aa26.68■■□□□ 1.86
CTSA-201ENST00000191018 NUP155O75694 1391 aa26.68■■□□□ 1.86
CTSA-201ENST00000191018 DUOX2Q9NRD8 1548 aa26.68■■□□□ 1.86
CTSA-201ENST00000191018 RTEL1-TNFRSF6BF6WH68 1400 aa26.64■■□□□ 1.85
CTSA-201ENST00000191018 PKD2Q13563 968 aa26.63■■□□□ 1.85
CTSA-201ENST00000191018 TEX14Q8IWB6 1497 aa26.63■■□□□ 1.85
CTSA-201ENST00000191018 ERBINQ96RT1 1412 aa26.62■■□□□ 1.85
CTSA-201ENST00000191018 ZFYVE16Q7Z3T8 1539 aa26.62■■□□□ 1.85
CTSA-201ENST00000191018 FAM135AQ9P2D6 1515 aa26.61■■□□□ 1.85
CTSA-201ENST00000191018 RIMBP3CA6NJZ7 1639 aa26.59■■□□□ 1.85
CTSA-201ENST00000191018 RIMBP3BA6NNM3 1639 aa26.59■■□□□ 1.85
CTSA-201ENST00000191018 RIMBP3Q9UFD9 1639 aa26.59■■□□□ 1.85
CTSA-201ENST00000191018 INO80Q9ULG1 1556 aaPredicted RBP26.58■■□□□ 1.85
CTSA-201ENST00000191018 ADGRL1O94910 1474 aa26.58■■□□□ 1.85
CTSA-201ENST00000191018 MAGI2Q86UL8 1455 aa26.58■■□□□ 1.85
CTSA-201ENST00000191018 L3MBTL2Q969R5 705 aa26.57■■□□□ 1.84
CTSA-201ENST00000191018 IQGAP3Q86VI3 1631 aa26.57■■□□□ 1.84
CTSA-201ENST00000191018 CFAP74Q9C0B2 1584 aa26.56■■□□□ 1.84
CTSA-201ENST00000191018 SPAG9O60271 1321 aaKnown RBP26.55■■□□□ 1.84
CTSA-201ENST00000191018 AFAP1Q8N556 730 aa26.55■■□□□ 1.84
CTSA-201ENST00000191018 SCAPERQ9BY12 1400 aa26.54■■□□□ 1.84
CTSA-201ENST00000191018 ATP7AQ04656 1500 aa26.53■■□□□ 1.84
CTSA-201ENST00000191018 CD109Q6YHK3 1445 aa26.52■■□□□ 1.84
CTSA-201ENST00000191018 MIER1Q8N108 512 aa26.49■■□□□ 1.83
CTSA-201ENST00000191018 DEPDC5O75140 1603 aa26.45■■□□□ 1.83
CTSA-201ENST00000191018 ZNF518AQ6AHZ1 1483 aa26.44■■□□□ 1.82
CTSA-201ENST00000191018 CYB5RLQ6IPT4 315 aa26.44■■□□□ 1.82
CTSA-201ENST00000191018 KIDINS220Q9ULH0 1771 aa26.44■■□□□ 1.82
CTSA-201ENST00000191018 KDM5CP41229 1560 aa26.42■■□□□ 1.82
CTSA-201ENST00000191018 EIF2AK4Q9P2K8 1649 aaKnown RBP26.41■■□□□ 1.82
CTSA-201ENST00000191018 MAP3K4Q9Y6R4 1608 aa26.4■■□□□ 1.82
CTSA-201ENST00000191018 NBPF8Q3BBV2 869 aa26.4■■□□□ 1.82
CTSA-201ENST00000191018 NEO1Q92859 1461 aa26.39■■□□□ 1.82
CTSA-201ENST00000191018 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.39■■□□□ 1.825e-7■□□□□ 10.4
CTSA-201ENST00000191018 GLI2P10070 1586 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms