RNA–Protein interactions for RNA: ENSMUST00000208231.1

Synm-204, Transcript of Synemin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Synm, Length 4,457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Synm-204ENSMUST00000208231 Smarca2Q6DIC0 1577 aa18.36■□□□□ 0.53
Synm-204ENSMUST00000208231 Gm6268A2A3U9 297 aa18.35■□□□□ 0.53
Synm-204ENSMUST00000208231 Hspa5P20029 655 aaKnown RBP18.35■□□□□ 0.53
Synm-204ENSMUST00000208231 Podxl2Q8CAE9 603 aa18.34■□□□□ 0.53
Synm-204ENSMUST00000208231 Sin3aQ60520 1274 aaKnown RBP18.34■□□□□ 0.53
Synm-204ENSMUST00000208231 Rwdd1Q9CQK7 243 aa18.33■□□□□ 0.53
Synm-204ENSMUST00000208231 Fam43aQ8BUP8 424 aa18.32■□□□□ 0.52
Synm-204ENSMUST00000208231 Kiaa0754Q69ZZ9 979 aa18.32■□□□□ 0.52
Synm-204ENSMUST00000208231 Phldb1Q6PDH0 1371 aaKnown RBP18.31■□□□□ 0.52
Synm-204ENSMUST00000208231 Synj1Q8CHC4 1574 aa18.31■□□□□ 0.52
Synm-204ENSMUST00000208231 Iqcf3Q9D498 203 aa18.3■□□□□ 0.52
Synm-204ENSMUST00000208231 DmtnQ9WV69 405 aa18.3■□□□□ 0.52
Synm-204ENSMUST00000208231 Map7O88735 730 aa18.29■□□□□ 0.52
Synm-204ENSMUST00000208231 Neurod2Q62414 383 aa18.29■□□□□ 0.52
Synm-204ENSMUST00000208231 TimelessQ9R1X4 1197 aa18.28■□□□□ 0.52
Synm-204ENSMUST00000208231 Ppp1r18Q8BQ30 594 aa18.27■□□□□ 0.52
Synm-204ENSMUST00000208231 Fmn1Q05860 1466 aa18.27■□□□□ 0.52
Synm-204ENSMUST00000208231 Grwd1Q810D6 446 aaKnown RBP18.27■□□□□ 0.52
Synm-204ENSMUST00000208231 Stard8Q8K031 1019 aa18.27■□□□□ 0.52
Synm-204ENSMUST00000208231 Atad2bE9Q166 1460 aaKnown RBP18.27■□□□□ 0.51
Synm-204ENSMUST00000208231 Crybg2B7ZCC2 1516 aa18.26■□□□□ 0.51
Synm-204ENSMUST00000208231 Cwc22Q8C5N3 908 aaKnown RBP18.26■□□□□ 0.51
Synm-204ENSMUST00000208231 Cux2P70298 1426 aa18.25■□□□□ 0.51
Synm-204ENSMUST00000208231 Rapgef2Q8CHG7 1496 aa18.25■□□□□ 0.51
Synm-204ENSMUST00000208231 Tpm2P58774 284 aa18.23■□□□□ 0.51
Synm-204ENSMUST00000208231 Mapk8ip3Q9ESN9 1337 aa18.22■□□□□ 0.51
Synm-204ENSMUST00000208231 Arid3cA6PWV5 409 aa18.21■□□□□ 0.51
Synm-204ENSMUST00000208231 NudcO35685 332 aaKnown RBP18.21■□□□□ 0.51
Synm-204ENSMUST00000208231 Gpatch11Q3UFS4 262 aa18.2■□□□□ 0.5
Synm-204ENSMUST00000208231 Gm973E9Q295 1059 aa18.2■□□□□ 0.5
Synm-204ENSMUST00000208231 Trim30aP15533 496 aa18.2■□□□□ 0.5
Synm-204ENSMUST00000208231 MyclP10166 368 aa18.19■□□□□ 0.5
Synm-204ENSMUST00000208231 Calcoco2A2A6M5 331 aa18.18■□□□□ 0.5
Synm-204ENSMUST00000208231 Phf14Q9D4H9 881 aa18.18■□□□□ 0.5
Synm-204ENSMUST00000208231 AknaQ80VW7 1404 aa18.18■□□□□ 0.5
Synm-204ENSMUST00000208231 Rbm10Q99KG3 930 aaKnown RBP18.17■□□□□ 0.5
Synm-204ENSMUST00000208231 Smg6P61406 1418 aaKnown RBP18.17■□□□□ 0.5
Synm-204ENSMUST00000208231 Eif2s2Q99L45 331 aaKnown RBP18.16■□□□□ 0.5
Synm-204ENSMUST00000208231 Card11Q8CIS0 1159 aa18.15■□□□□ 0.5
Synm-204ENSMUST00000208231 AampJ3QN89 436 aa18.15■□□□□ 0.5
Synm-204ENSMUST00000208231 Aebp1Q640N1 1128 aa18.14■□□□□ 0.49
Synm-204ENSMUST00000208231 KnstrnQ9D9Z1 312 aaKnown RBP18.14■□□□□ 0.49
Synm-204ENSMUST00000208231 Washc2Q6PGL7 1334 aa18.14■□□□□ 0.49
Synm-204ENSMUST00000208231 CntlnA2AM05 1397 aa18.13■□□□□ 0.49
Synm-204ENSMUST00000208231 Mfap1aC0HKD8 439 aaKnown RBP18.13■□□□□ 0.49
Synm-204ENSMUST00000208231 Mfap1bC0HKD9 439 aaKnown RBP18.13■□□□□ 0.49
Synm-204ENSMUST00000208231 Mak16Q8BGS0 296 aaKnown RBP18.13■□□□□ 0.49
Synm-204ENSMUST00000208231 PtmsQ9D0J8 101 aaKnown RBP18.13■□□□□ 0.49
Synm-204ENSMUST00000208231 Clstn2Q9ER65 966 aa18.12■□□□□ 0.49
Synm-204ENSMUST00000208231 Zscan21Q07231 555 aa18.11■□□□□ 0.49
Synm-204ENSMUST00000208231 RdxP26043 583 aaKnown RBP18.1■□□□□ 0.49
Synm-204ENSMUST00000208231 Fhad1A6PWD2 1420 aa18.1■□□□□ 0.49
Synm-204ENSMUST00000208231 Vgll3P85442 326 aa18.09■□□□□ 0.49
Synm-204ENSMUST00000208231 Pcmtd1P59913 357 aa18.09■□□□□ 0.49
Synm-204ENSMUST00000208231 Fam13bQ8K2H3 851 aa18.09■□□□□ 0.49
Synm-204ENSMUST00000208231 Kdm2aP59997 1161 aa18.08■□□□□ 0.49
Synm-204ENSMUST00000208231 Paxip1Q6NZQ4 1056 aa18.08■□□□□ 0.48
Synm-204ENSMUST00000208231 Mia2Q91ZV0 1396 aa18.08■□□□□ 0.48
Synm-204ENSMUST00000208231 Rrp7aQ9D1C9 280 aaKnown RBP18.04■□□□□ 0.48
Synm-204ENSMUST00000208231 Ak7Q9D2H2 614 aa18.04■□□□□ 0.48
Synm-204ENSMUST00000208231 Rsph3aQ3UFY4 516 aa18.04■□□□□ 0.48
Synm-204ENSMUST00000208231 Cabp1Q9JLK7 227 aa18.03■□□□□ 0.48
Synm-204ENSMUST00000208231 Baz1bQ9Z277 1479 aa18.02■□□□□ 0.48
Synm-204ENSMUST00000208231 Zfp777B9EKF4 885 aa18.01■□□□□ 0.47
Synm-204ENSMUST00000208231 Ttll13A4Q9F6 804 aa18.01■□□□□ 0.47
Synm-204ENSMUST00000208231 Dusp27Q148W8 1138 aa18■□□□□ 0.47
Synm-204ENSMUST00000208231 Speer4f1Q9D5Q6 258 aa18■□□□□ 0.47
Synm-204ENSMUST00000208231 Pabpn1Q8CCS6 302 aaKnown RBP18■□□□□ 0.47
Synm-204ENSMUST00000208231 Cluap1Q8R3P7 413 aa17.99■□□□□ 0.47
Synm-204ENSMUST00000208231 Kif27Q7M6Z4 1394 aa17.99■□□□□ 0.47
Synm-204ENSMUST00000208231 Pkd2O35245 966 aa17.99■□□□□ 0.47
Synm-204ENSMUST00000208231 Kif20aP97329 887 aa17.98■□□□□ 0.47
Synm-204ENSMUST00000208231 Pdia4P08003 638 aaKnown RBP17.97■□□□□ 0.47
Synm-204ENSMUST00000208231 Mtus2Q3UHD3 1353 aa17.97■□□□□ 0.47
Synm-204ENSMUST00000208231 GorabQ8BRM2 368 aa17.96■□□□□ 0.47
Synm-204ENSMUST00000208231 Mrvi1Q9WUX5 899 aaKnown RBP17.96■□□□□ 0.47
Synm-204ENSMUST00000208231 Taf3Q5HZG4 932 aa17.94■□□□□ 0.46
Synm-204ENSMUST00000208231 Znf771Q8BJ90 317 aa17.94■□□□□ 0.46
Synm-204ENSMUST00000208231 MlecQ6ZQI3 291 aaKnown RBP17.94■□□□□ 0.46
Synm-204ENSMUST00000208231 Prkrip1Q9CWV6 186 aaKnown RBP17.94■□□□□ 0.46
Synm-204ENSMUST00000208231 Q8BT18 775 aa17.93■□□□□ 0.46
Synm-204ENSMUST00000208231 Rpap1Q80TE0 1409 aa17.93■□□□□ 0.46
Synm-204ENSMUST00000208231 Smarca4Q3TKT4 1613 aaKnown RBP17.93■□□□□ 0.46
Synm-204ENSMUST00000208231 Mroh3A0A1D5RM54 893 aa17.92■□□□□ 0.46
Synm-204ENSMUST00000208231 Chmp4bQ9D8B3 224 aaKnown RBP17.92■□□□□ 0.46
Synm-204ENSMUST00000208231 SetQ9EQU5 289 aaKnown RBP17.92■□□□□ 0.46
Synm-204ENSMUST00000208231 Kif3aP28741 701 aa17.92■□□□□ 0.46
Synm-204ENSMUST00000208231 Cspp1B2RX88 1205 aa17.91■□□□□ 0.46
Synm-204ENSMUST00000208231 Samd1D3YXK1 519 aa17.91■□□□□ 0.46
Synm-204ENSMUST00000208231 Rfx1P48377 963 aa17.91■□□□□ 0.46
Synm-204ENSMUST00000208231 Mphosph9A6H5Y1 991 aa17.9■□□□□ 0.46
Synm-204ENSMUST00000208231 Trak1Q6PD31 939 aa17.9■□□□□ 0.46
Synm-204ENSMUST00000208231 LrpprcQ6PB66 1392 aaKnown RBP17.89■□□□□ 0.45
Synm-204ENSMUST00000208231 Hsp90b1P08113 802 aaKnown RBP17.89■□□□□ 0.45
Synm-204ENSMUST00000208231 Dhx29Q6PGC1 1365 aaKnown RBP17.89■□□□□ 0.45
Synm-204ENSMUST00000208231 Tomm22Q9CPQ3 142 aa17.88■□□□□ 0.45
Synm-204ENSMUST00000208231 MccE9PWI3 1003 aa17.86■□□□□ 0.45
Synm-204ENSMUST00000208231 Rabep1O35551 862 aa17.86■□□□□ 0.45
Synm-204ENSMUST00000208231 CrbnQ8C7D2 445 aa17.86■□□□□ 0.45
Synm-204ENSMUST00000208231 Rundc1Q0VDN7 615 aa17.86■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 81.9 ms