RNA–Protein interactions for RNA: ENSMUST00000202681.3

Pdgfra-208, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 2,876 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-208ENSMUST00000202681 Tcerg1Q8CGF7 1100 aaKnown RBP11.76□□□□□ -0.53
Pdgfra-208ENSMUST00000202681 SynmQ70IV5 1561 aa11.74□□□□□ -0.53
Pdgfra-208ENSMUST00000202681 Pla2r1Q62028 1487 aa11.74□□□□□ -0.53
Pdgfra-208ENSMUST00000202681 Disp1Q3TDN0 1521 aa11.74□□□□□ -0.53
Pdgfra-208ENSMUST00000202681 AqrQ8CFQ3 1481 aaKnown RBP11.73□□□□□ -0.53
Pdgfra-208ENSMUST00000202681 Magi3Q9EQJ9 1476 aa11.73□□□□□ -0.53
Pdgfra-208ENSMUST00000202681 Mrs2Q5NCE8 434 aa11.73□□□□□ -0.53
Pdgfra-208ENSMUST00000202681 Kcnn1Q9EQR3 537 aa11.73□□□□□ -0.53
Pdgfra-208ENSMUST00000202681 Setd1bQ8CFT2 1985 aa11.72□□□□□ -0.53
Pdgfra-208ENSMUST00000202681 CatipB9EKE5 520 aa11.72□□□□□ -0.53
Pdgfra-208ENSMUST00000202681 DaxxO35613 739 aa11.72□□□□□ -0.53
Pdgfra-208ENSMUST00000202681 Fam50aQ9WV03 339 aaKnown RBP11.72□□□□□ -0.53
Pdgfra-208ENSMUST00000202681 Grin2aP35436 1464 aa11.72□□□□□ -0.53
Pdgfra-208ENSMUST00000202681 Slc4a2P13808 1237 aaKnown RBP11.71□□□□□ -0.54
Pdgfra-208ENSMUST00000202681 Ankrd26Q811D2 1581 aa11.71□□□□□ -0.54
Pdgfra-208ENSMUST00000202681 Arhgap27A2AB59 869 aa11.7□□□□□ -0.54
Pdgfra-208ENSMUST00000202681 Carmil1Q6EDY6 1374 aa11.68□□□□□ -0.54
Pdgfra-208ENSMUST00000202681 Fhad1A6PWD2 1420 aa11.68□□□□□ -0.54
Pdgfra-208ENSMUST00000202681 Map3k1P53349 1493 aa11.68□□□□□ -0.54
Pdgfra-208ENSMUST00000202681 Naip1Q9QWK5 1403 aa11.68□□□□□ -0.54
Pdgfra-208ENSMUST00000202681 Pprc1Q6NZN1 1644 aa11.68□□□□□ -0.54
Pdgfra-208ENSMUST00000202681 Fyco1Q8VDC1 1437 aa11.67□□□□□ -0.54
Pdgfra-208ENSMUST00000202681 PxdnQ3UQ28 1475 aa11.67□□□□□ -0.54
Pdgfra-208ENSMUST00000202681 Prm3Q62100 101 aa11.67□□□□□ -0.54
Pdgfra-208ENSMUST00000202681 Naip5Q9R016 1403 aa11.67□□□□□ -0.54
Pdgfra-208ENSMUST00000202681 Fkbp15Q6P9Q6 1216 aaKnown RBP11.67□□□□□ -0.54
Pdgfra-208ENSMUST00000202681 Pcf11G3X9Z4 1553 aa11.66□□□□□ -0.54
Pdgfra-208ENSMUST00000202681 WizO88286 1684 aaKnown RBP11.66□□□□□ -0.54
Pdgfra-208ENSMUST00000202681 ChgaP26339 463 aaKnown RBP11.65□□□□□ -0.54
Pdgfra-208ENSMUST00000202681 BlmO88700 1416 aa11.65□□□□□ -0.54
Pdgfra-208ENSMUST00000202681 EprsQ8CGC7 1512 aaKnown RBP11.65□□□□□ -0.54
Pdgfra-208ENSMUST00000202681 Gm13695A2AK44 830 aa11.65□□□□□ -0.55
Pdgfra-208ENSMUST00000202681 Kcnh8P59111 1102 aa11.64□□□□□ -0.55
Pdgfra-208ENSMUST00000202681 Vps8Q0P5W1 1427 aa11.63□□□□□ -0.55
Pdgfra-208ENSMUST00000202681 Mia2Q91ZV0 1396 aa11.63□□□□□ -0.55
Pdgfra-208ENSMUST00000202681 Pdcl3Q8BVF2 240 aa11.62□□□□□ -0.55
Pdgfra-208ENSMUST00000202681 Wwc2Q6NXJ0 1187 aa11.62□□□□□ -0.55
Pdgfra-208ENSMUST00000202681 Exoc6Q8R313 802 aa11.62□□□□□ -0.55
Pdgfra-208ENSMUST00000202681 Erich3F6QRE9 1637 aa11.62□□□□□ -0.55
Pdgfra-208ENSMUST00000202681 Slx4Q6P1D7 1565 aa11.62□□□□□ -0.55
Pdgfra-208ENSMUST00000202681 3425401B19RikD3Z1D3 1412 aa11.6□□□□□ -0.55
Pdgfra-208ENSMUST00000202681 CadpsQ80TJ1 1355 aa11.6□□□□□ -0.55
Pdgfra-208ENSMUST00000202681 Ift140E9PY46 1464 aa11.6□□□□□ -0.55
Pdgfra-208ENSMUST00000202681 PnisrA2AJT4 805 aaKnown RBP11.59□□□□□ -0.55
Pdgfra-208ENSMUST00000202681 NeflP08551 543 aa11.59□□□□□ -0.55
Pdgfra-208ENSMUST00000202681 Aebp1Q640N1 1128 aa11.59□□□□□ -0.55
Pdgfra-208ENSMUST00000202681 Cul7Q8VE73 1689 aa11.59□□□□□ -0.55
Pdgfra-208ENSMUST00000202681 Ncoa1P70365 1447 aa11.59□□□□□ -0.55
Pdgfra-208ENSMUST00000202681 L3mbtl2P59178 703 aa11.58□□□□□ -0.56
Pdgfra-208ENSMUST00000202681 Nup160Q9Z0W3 1402 aaKnown RBP11.58□□□□□ -0.56
Pdgfra-208ENSMUST00000202681 Gm7298A0A0N4SVU1 1476 aa11.58□□□□□ -0.56
Pdgfra-208ENSMUST00000202681 Ofd1Q80Z25 1017 aa11.57□□□□□ -0.56
Pdgfra-208ENSMUST00000202681 Abca16E9PWJ7 1678 aa11.57□□□□□ -0.56
Pdgfra-208ENSMUST00000202681 AknaQ80VW7 1404 aa11.56□□□□□ -0.56
Pdgfra-208ENSMUST00000202681 Mink1Q9JM52 1308 aa11.56□□□□□ -0.56
Pdgfra-208ENSMUST00000202681 Gtf2a1Q99PM3 378 aa11.55□□□□□ -0.56
Pdgfra-208ENSMUST00000202681 Lmo7E9PYF4 1699 aaKnown RBP11.55□□□□□ -0.56
Pdgfra-208ENSMUST00000202681 WrnO09053 1401 aa11.54□□□□□ -0.56
Pdgfra-208ENSMUST00000202681 AampJ3QN89 436 aa11.54□□□□□ -0.56
Pdgfra-208ENSMUST00000202681 Gpatch8A2A6A1 1505 aa11.53□□□□□ -0.56
Pdgfra-208ENSMUST00000202681 Rusc2Q80U22 1514 aa11.53□□□□□ -0.56
Pdgfra-208ENSMUST00000202681 Nkx1-2P42580 305 aa11.53□□□□□ -0.56
Pdgfra-208ENSMUST00000202681 Naip2Q9QUK4 1447 aa11.52□□□□□ -0.56
Pdgfra-208ENSMUST00000202681 CntlnA2AM05 1397 aa11.52□□□□□ -0.57
Pdgfra-208ENSMUST00000202681 Eif4g3Q80XI3 1579 aaKnown RBP11.52□□□□□ -0.57
Pdgfra-208ENSMUST00000202681 Abcc2Q8VI47 1543 aa11.52□□□□□ -0.57
Pdgfra-208ENSMUST00000202681 CanxP35564 591 aaKnown RBP11.51□□□□□ -0.57
Pdgfra-208ENSMUST00000202681 Ripply1Q2WG77 201 aa11.51□□□□□ -0.57
Pdgfra-208ENSMUST00000202681 Adamts12Q811B3 1600 aa11.51□□□□□ -0.57
Pdgfra-208ENSMUST00000202681 Sart3Q9JLI8 962 aaKnown RBP11.5□□□□□ -0.57
Pdgfra-208ENSMUST00000202681 Neo1P97798 1493 aa11.49□□□□□ -0.57
Pdgfra-208ENSMUST00000202681 Abca5Q8K448 1642 aa11.49□□□□□ -0.57
Pdgfra-208ENSMUST00000202681 Skap1Q3UUV5 355 aa11.49□□□□□ -0.57
Pdgfra-208ENSMUST00000202681 Mre11Q61216 706 aa11.49□□□□□ -0.57
Pdgfra-208ENSMUST00000202681 Q8BT18 775 aa11.49□□□□□ -0.57
Pdgfra-208ENSMUST00000202681 Pdlim2Q8R1G6 349 aa11.48□□□□□ -0.57
Pdgfra-208ENSMUST00000202681 Kif27Q7M6Z4 1394 aa11.48□□□□□ -0.57
Pdgfra-208ENSMUST00000202681 AU015836B2RUM3 263 aa11.48□□□□□ -0.57
Pdgfra-208ENSMUST00000202681 Rrp9Q91WM3 475 aaKnown RBP11.48□□□□□ -0.57
Pdgfra-208ENSMUST00000202681 Prkrip1Q9CWV6 186 aaKnown RBP11.48□□□□□ -0.57
Pdgfra-208ENSMUST00000202681 BC005561E9Q5E2 1589 aa11.47□□□□□ -0.57
Pdgfra-208ENSMUST00000202681 Kank1E9Q238 1360 aa11.47□□□□□ -0.57
Pdgfra-208ENSMUST00000202681 Zfp777B9EKF4 885 aa11.47□□□□□ -0.57
Pdgfra-208ENSMUST00000202681 Fhod3Q76LL6 1578 aa11.47□□□□□ -0.57
Pdgfra-208ENSMUST00000202681 Trap1aP19473 224 aa11.46□□□□□ -0.57
Pdgfra-208ENSMUST00000202681 Chic2Q9D9G3 165 aa11.46□□□□□ -0.57
Pdgfra-208ENSMUST00000202681 Cc2d2bA0A286YDU8 1405 aa11.46□□□□□ -0.57
Pdgfra-208ENSMUST00000202681 Gm1043A0A140LJC2 1431 aa11.46□□□□□ -0.57
Pdgfra-208ENSMUST00000202681 DmtnQ9WV69 405 aa11.46□□□□□ -0.57
Pdgfra-208ENSMUST00000202681 Dennd4bQ3U1Y4 1499 aa11.46□□□□□ -0.58
Pdgfra-208ENSMUST00000202681 TnikP83510 1323 aa11.46□□□□□ -0.58
Pdgfra-208ENSMUST00000202681 Erbb3Q61526 1339 aa11.46□□□□□ -0.58
Pdgfra-208ENSMUST00000202681 Polr1aO35134 1717 aaKnown RBP11.45□□□□□ -0.58
Pdgfra-208ENSMUST00000202681 Ttll13A4Q9F6 804 aa11.45□□□□□ -0.58
Pdgfra-208ENSMUST00000202681 Peg3Q3URU2 1571 aa11.45□□□□□ -0.58
Pdgfra-208ENSMUST00000202681 Soga1E1U8D0 1418 aa11.44□□□□□ -0.58
Pdgfra-208ENSMUST00000202681 Dnai1Q8C0M8 701 aa11.44□□□□□ -0.58
Pdgfra-208ENSMUST00000202681 Shroom2A2ALU4 1481 aa11.44□□□□□ -0.58
Pdgfra-208ENSMUST00000202681 Znf692Q3U381 531 aa11.43□□□□□ -0.58
Pdgfra-208ENSMUST00000202681 Dnttip2Q8R2M2 758 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 144.7 ms