RNA–Protein interactions for RNA: ENSMUST00000199896.1

Smarcc1-207, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,773 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-207ENSMUST00000199896 Txndc2Q6P902 515 aa23,02■■□□□ 1,28
Smarcc1-207ENSMUST00000199896 PnnO35691 725 aaKnown RBP23,01■■□□□ 1,27
Smarcc1-207ENSMUST00000199896 Htatsf1Q8BGC0 757 aa23,01■■□□□ 1,27
Smarcc1-207ENSMUST00000199896 Speer4f1Q9D5Q6 258 aa23,01■■□□□ 1,27
Smarcc1-207ENSMUST00000199896 Birc3O08863 600 aa23■■□□□ 1,27
Smarcc1-207ENSMUST00000199896 Ppm1gQ61074 542 aa23■■□□□ 1,27
Smarcc1-207ENSMUST00000199896 Mphosph9A6H5Y1 991 aa22,99■■□□□ 1,27
Smarcc1-207ENSMUST00000199896 Znf316Q6PGE4 1016 aa22,99■■□□□ 1,27
Smarcc1-207ENSMUST00000199896 Tmf1B9EKI3 1091 aa22,97■■□□□ 1,27
Smarcc1-207ENSMUST00000199896 U2af1Q9D883 239 aaKnown RBP22,97■■□□□ 1,27
Smarcc1-207ENSMUST00000199896 Kif3bQ61771 747 aa22,97■■□□□ 1,27
Smarcc1-207ENSMUST00000199896 Sh3bp5Q9Z131 463 aa22,96■■□□□ 1,27
Smarcc1-207ENSMUST00000199896 Baz1bQ9Z277 1479 aa22,96■■□□□ 1,27
Smarcc1-207ENSMUST00000199896 Cux2P70298 1426 aa22,96■■□□□ 1,27
Smarcc1-207ENSMUST00000199896 Fyco1Q8VDC1 1437 aa22,96■■□□□ 1,27
Smarcc1-207ENSMUST00000199896 Slc4a3P16283 1227 aa22,96■■□□□ 1,27
Smarcc1-207ENSMUST00000199896 1700123L14RikQ3V2K7 440 aa22,94■■□□□ 1,26
Smarcc1-207ENSMUST00000199896 Exoc6Q8R313 802 aa22,93■■□□□ 1,26
Smarcc1-207ENSMUST00000199896 Dcaf11Q91VU6 549 aa22,93■■□□□ 1,26
Smarcc1-207ENSMUST00000199896 Q8BT18 775 aa22,93■■□□□ 1,26
Smarcc1-207ENSMUST00000199896 Ccdc9Q8VC31 543 aaKnown RBP22,92■■□□□ 1,26
Smarcc1-207ENSMUST00000199896 Tnnt1O88346 262 aa22,92■■□□□ 1,26
Smarcc1-207ENSMUST00000199896 Tmco5bQ80X59 307 aa22,92■■□□□ 1,26
Smarcc1-207ENSMUST00000199896 KnstrnQ9D9Z1 312 aaKnown RBP22,92■■□□□ 1,26
Smarcc1-207ENSMUST00000199896 HnrnpuQ8VEK3 800 aaKnown RBP22,89■■□□□ 1,25
Smarcc1-207ENSMUST00000199896 Casc1Q6TDU8 730 aa22,89■■□□□ 1,25
Smarcc1-207ENSMUST00000199896 Spryd3E9Q9B3 442 aa22,89■■□□□ 1,25
Smarcc1-207ENSMUST00000199896 SafbD3YXK2 937 aaKnown RBP22,87■■□□□ 1,25
Smarcc1-207ENSMUST00000199896 Q3TQI7 289 aaKnown RBP22,87■■□□□ 1,25
Smarcc1-207ENSMUST00000199896 Eif4g2Q62448 906 aaKnown RBP22,87■■□□□ 1,25
Smarcc1-207ENSMUST00000199896 Rassf8Q8CJ96 419 aa22,87■■□□□ 1,25
Smarcc1-207ENSMUST00000199896 Senp3Q9EP97 568 aaKnown RBP22,87■■□□□ 1,25
Smarcc1-207ENSMUST00000199896 Zscan21Q07231 555 aa22,85■■□□□ 1,25
Smarcc1-207ENSMUST00000199896 CntlnA2AM05 1397 aa22,85■■□□□ 1,25
Smarcc1-207ENSMUST00000199896 MccE9PWI3 1003 aa22,84■■□□□ 1,25
Smarcc1-207ENSMUST00000199896 Mbd3Q9Z2D8 285 aaKnown RBP22,84■■□□□ 1,25
Smarcc1-207ENSMUST00000199896 Nup155Q99P88 1391 aaKnown RBP22,84■■□□□ 1,25
Smarcc1-207ENSMUST00000199896 Arhgap35Q91YM2 1499 aa22,83■■□□□ 1,25
Smarcc1-207ENSMUST00000199896 Golga2Q921M4 999 aa22,83■■□□□ 1,25
Smarcc1-207ENSMUST00000199896 Srcin1Q9QWI6 1250 aa22,83■■□□□ 1,24
Smarcc1-207ENSMUST00000199896 Sart3Q9JLI8 962 aaKnown RBP22,82■■□□□ 1,24
Smarcc1-207ENSMUST00000199896 Rock2P70336 1388 aa22,81■■□□□ 1,24
Smarcc1-207ENSMUST00000199896 Znf330Q922H9 316 aa22,81■■□□□ 1,24
Smarcc1-207ENSMUST00000199896 HdgfP51859 237 aaKnown RBP22,8■■□□□ 1,24
Smarcc1-207ENSMUST00000199896 Chmp5Q9D7S9 219 aa22,8■■□□□ 1,24
Smarcc1-207ENSMUST00000199896 Sart1Q9Z315 806 aaKnown RBP22,79■■□□□ 1,24
Smarcc1-207ENSMUST00000199896 Dhx57Q6P5D3 1388 aaKnown RBP22,78■■□□□ 1,24
Smarcc1-207ENSMUST00000199896 Ccdc27Q3V036 639 aa22,78■■□□□ 1,24
Smarcc1-207ENSMUST00000199896 Nol10Q5RJG1 687 aaKnown RBP22,78■■□□□ 1,24
Smarcc1-207ENSMUST00000199896 Mak16Q8BGS0 296 aaKnown RBP22,77■■□□□ 1,24
Smarcc1-207ENSMUST00000199896 Cluap1Q8R3P7 413 aa22,76■■□□□ 1,23
Smarcc1-207ENSMUST00000199896 Fan1Q69ZT1 1020 aa22,76■■□□□ 1,23
Smarcc1-207ENSMUST00000199896 Anapc15P60007 132 aa22,75■■□□□ 1,23
Smarcc1-207ENSMUST00000199896 Supt16hQ920B9 1047 aa22,74■■□□□ 1,23
Smarcc1-207ENSMUST00000199896 Pibf1E9Q6K3 756 aa22,74■■□□□ 1,23
Smarcc1-207ENSMUST00000199896 Phldb1Q6PDH0 1371 aaKnown RBP22,73■■□□□ 1,23
Smarcc1-207ENSMUST00000199896 Spag9Q58A65 1321 aaKnown RBP22,72■■□□□ 1,23
Smarcc1-207ENSMUST00000199896 Slc4a1apE9PX68 744 aa22,72■■□□□ 1,23
Smarcc1-207ENSMUST00000199896 Utp14aQ640M1 767 aaKnown RBP22,72■■□□□ 1,23
Smarcc1-207ENSMUST00000199896 Sycp2Q9CUU3 1500 aa22,72■■□□□ 1,23
Smarcc1-207ENSMUST00000199896 Plekhh2Q8C115 1491 aa22,72■■□□□ 1,23
Smarcc1-207ENSMUST00000199896 CrbnQ8C7D2 445 aa22,7■■□□□ 1,22
Smarcc1-207ENSMUST00000199896 Carmil1Q6EDY6 1374 aa22,69■■□□□ 1,22
Smarcc1-207ENSMUST00000199896 Tcerg1Q8CGF7 1100 aaKnown RBP22,68■■□□□ 1,22
Smarcc1-207ENSMUST00000199896 CftrP26361 1476 aa22,68■■□□□ 1,22
Smarcc1-207ENSMUST00000199896 Ksr2Q3UVC0 959 aa22,66■■□□□ 1,22
Smarcc1-207ENSMUST00000199896 Ccnb3Q810T2 1396 aa22,65■■□□□ 1,22
Smarcc1-207ENSMUST00000199896 Rsph4aQ8BYM7 716 aa22,65■■□□□ 1,22
Smarcc1-207ENSMUST00000199896 MecomP14404 1042 aa22,65■■□□□ 1,22
Smarcc1-207ENSMUST00000199896 Ap3b2Q9JME5 1082 aa22,64■■□□□ 1,21
Smarcc1-207ENSMUST00000199896 Iffo2Q8R2V2 512 aa22,63■■□□□ 1,21
Smarcc1-207ENSMUST00000199896 Chmp3Q9CQ10 224 aa22,63■■□□□ 1,21
Smarcc1-207ENSMUST00000199896 CenpjQ569L8 1344 aa22,62■■□□□ 1,21
Smarcc1-207ENSMUST00000199896 EspnQ9ET47 871 aa22,62■■□□□ 1,21
Smarcc1-207ENSMUST00000199896 Pcmtd1P59913 357 aa22,62■■□□□ 1,21
Smarcc1-207ENSMUST00000199896 Pde3bQ61409 1100 aa22,62■■□□□ 1,21
Smarcc1-207ENSMUST00000199896 Cecr2E9Q2Z1 1453 aa22,61■■□□□ 1,21
Smarcc1-207ENSMUST00000199896 Pak3Q61036 559 aa22,61■■□□□ 1,21
Smarcc1-207ENSMUST00000199896 Rapgef2Q8CHG7 1496 aa22,58■■□□□ 1,21
Smarcc1-207ENSMUST00000199896 Mfap1aC0HKD8 439 aaKnown RBP22,57■■□□□ 1,2
Smarcc1-207ENSMUST00000199896 Mfap1bC0HKD9 439 aaKnown RBP22,57■■□□□ 1,2
Smarcc1-207ENSMUST00000199896 Brpf1B2RRD7 1212 aa22,56■■□□□ 1,2
Smarcc1-207ENSMUST00000199896 Cabp4Q8VHC5 271 aa22,56■■□□□ 1,2
Smarcc1-207ENSMUST00000199896 Ccar1Q8CH18 1146 aaKnown RBP22,55■■□□□ 1,2
Smarcc1-207ENSMUST00000199896 Stard8Q8K031 1019 aa22,55■■□□□ 1,2
Smarcc1-207ENSMUST00000199896 LrpprcQ6PB66 1392 aaKnown RBP22,55■■□□□ 1,2
Smarcc1-207ENSMUST00000199896 CgnP59242 1191 aa22,55■■□□□ 1,2
Smarcc1-207ENSMUST00000199896 Dnai1Q8C0M8 701 aa22,55■■□□□ 1,2
Smarcc1-207ENSMUST00000199896 Tsen2Q6P7W5 460 aa22,55■■□□□ 1,2
Smarcc1-207ENSMUST00000199896 GorabQ8BRM2 368 aa22,54■■□□□ 1,2
Smarcc1-207ENSMUST00000199896 Pank3Q8R2W9 370 aa22,53■■□□□ 1,2
Smarcc1-207ENSMUST00000199896 Shq1Q7TMX5 569 aa22,53■■□□□ 1,2
Smarcc1-207ENSMUST00000199896 Ubap1lG3UW59 384 aa22,52■■□□□ 1,2
Smarcc1-207ENSMUST00000199896 Pabpn1Q8CCS6 302 aaKnown RBP22,51■■□□□ 1,19
Smarcc1-207ENSMUST00000199896 Erich6bQ9D4S6 220 aa22,5■■□□□ 1,19
Smarcc1-207ENSMUST00000199896 Stk31Q99MW1 1018 aa22,5■■□□□ 1,19
Smarcc1-207ENSMUST00000199896 Atad2bE9Q166 1460 aaKnown RBP22,49■■□□□ 1,19
Smarcc1-207ENSMUST00000199896 WrnO09053 1401 aa22,49■■□□□ 1,19
Smarcc1-207ENSMUST00000199896 Dhx29Q6PGC1 1365 aaKnown RBP22,48■■□□□ 1,19
Smarcc1-207ENSMUST00000199896 Dnai2A2AC93 623 aa22,48■■□□□ 1,19
Retrieved 100 of 22,080 RNA–protein pairs in 42,9 ms