RNA–Protein interactions for RNA: ENSMUST00000136980.7

Prpf40b-208, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40b, Length 3,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-208ENSMUST00000136980 Arhgap27A2AB59 869 aa15.52■□□□□ 0.07
Prpf40b-208ENSMUST00000136980 Lmo7E9PYF4 1699 aaKnown RBP15.52■□□□□ 0.07
Prpf40b-208ENSMUST00000136980 Zfp644E9QA22 1323 aa15.51■□□□□ 0.07
Prpf40b-208ENSMUST00000136980 Dennd4bQ3U1Y4 1499 aa15.5■□□□□ 0.07
Prpf40b-208ENSMUST00000136980 Carmil1Q6EDY6 1374 aa15.49■□□□□ 0.07
Prpf40b-208ENSMUST00000136980 Ccnb3Q810T2 1396 aa15.48■□□□□ 0.07
Prpf40b-208ENSMUST00000136980 Ofd1Q80Z25 1017 aa15.48■□□□□ 0.07
Prpf40b-208ENSMUST00000136980 Gm1043A0A140LJC2 1431 aa15.48■□□□□ 0.07
Prpf40b-208ENSMUST00000136980 Kif21aQ9QXL2 1672 aa15.47■□□□□ 0.07
Prpf40b-208ENSMUST00000136980 Gm13695A2AK44 830 aa15.47■□□□□ 0.07
Prpf40b-208ENSMUST00000136980 Npm1Q61937 292 aaKnown RBP15.47■□□□□ 0.07
Prpf40b-208ENSMUST00000136980 Crocc2F6XLV1 1638 aa15.44■□□□□ 0.06
Prpf40b-208ENSMUST00000136980 Pkd2O35245 966 aa15.44■□□□□ 0.06
Prpf40b-208ENSMUST00000136980 L3mbtl2P59178 703 aa15.44■□□□□ 0.06
Prpf40b-208ENSMUST00000136980 Camsap2Q8C1B1 1461 aa15.44■□□□□ 0.06
Prpf40b-208ENSMUST00000136980 PnisrA2AJT4 805 aaKnown RBP15.43■□□□□ 0.06
Prpf40b-208ENSMUST00000136980 Hsp90aa1P07901 733 aaKnown RBP15.43■□□□□ 0.06
Prpf40b-208ENSMUST00000136980 Cabp1Q9JLK7 227 aa15.43■□□□□ 0.06
Prpf40b-208ENSMUST00000136980 Usp47Q8BY87 1376 aa15.43■□□□□ 0.06
Prpf40b-208ENSMUST00000136980 Urb2E9Q7L1 1524 aaKnown RBP15.42■□□□□ 0.06
Prpf40b-208ENSMUST00000136980 AampJ3QN89 436 aa15.42■□□□□ 0.06
Prpf40b-208ENSMUST00000136980 Ncoa1P70365 1447 aa15.42■□□□□ 0.06
Prpf40b-208ENSMUST00000136980 Rtn4Q99P72 1162 aaKnown RBP15.41■□□□□ 0.06
Prpf40b-208ENSMUST00000136980 Rsph4aQ8BYM7 716 aa15.41■□□□□ 0.06
Prpf40b-208ENSMUST00000136980 Pprc1Q6NZN1 1644 aa15.38■□□□□ 0.05
Prpf40b-208ENSMUST00000136980 ChgaP26339 463 aaKnown RBP15.38■□□□□ 0.05
Prpf40b-208ENSMUST00000136980 Rgl3Q3UYI5 709 aa15.38■□□□□ 0.05
Prpf40b-208ENSMUST00000136980 Ipo9Q91YE6 1041 aa15.38■□□□□ 0.05
Prpf40b-208ENSMUST00000136980 Zbtb4Q5F293 982 aa15.38■□□□□ 0.05
Prpf40b-208ENSMUST00000136980 Kcnn1Q9EQR3 537 aa15.38■□□□□ 0.05
Prpf40b-208ENSMUST00000136980 LrpprcQ6PB66 1392 aaKnown RBP15.36■□□□□ 0.05
Prpf40b-208ENSMUST00000136980 Taok2Q6ZQ29 1240 aa15.35■□□□□ 0.05
Prpf40b-208ENSMUST00000136980 Tcerg1Q8CGF7 1100 aaKnown RBP15.34■□□□□ 0.05
Prpf40b-208ENSMUST00000136980 PogzQ8BZH4 1409 aaKnown RBP15.33■□□□□ 0.04
Prpf40b-208ENSMUST00000136980 4933416C03RikQ3V063 378 aa15.33■□□□□ 0.04
Prpf40b-208ENSMUST00000136980 Rad54l2Q99NG0 1466 aa15.33■□□□□ 0.04
Prpf40b-208ENSMUST00000136980 Cul7Q8VE73 1689 aa15.32■□□□□ 0.04
Prpf40b-208ENSMUST00000136980 Duox2A2AQ99 1517 aa15.31■□□□□ 0.04
Prpf40b-208ENSMUST00000136980 Rad21Q61550 635 aaKnown RBP15.3■□□□□ 0.04
Prpf40b-208ENSMUST00000136980 Peg3Q3URU2 1571 aa15.3■□□□□ 0.04
Prpf40b-208ENSMUST00000136980 Grwd1Q810D6 446 aaKnown RBP15.3■□□□□ 0.04
Prpf40b-208ENSMUST00000136980 Rbm10Q99KG3 930 aaKnown RBP15.3■□□□□ 0.04
Prpf40b-208ENSMUST00000136980 Lrriq1Q0P5X1 1673 aa15.3■□□□□ 0.04
Prpf40b-208ENSMUST00000136980 Rundc1Q0VDN7 615 aa15.3■□□□□ 0.04
Prpf40b-208ENSMUST00000136980 DaxxO35613 739 aa15.28■□□□□ 0.04
Prpf40b-208ENSMUST00000136980 NeflP08551 543 aa15.27■□□□□ 0.04
Prpf40b-208ENSMUST00000136980 Erbb3Q61526 1339 aa15.27■□□□□ 0.03
Prpf40b-208ENSMUST00000136980 Mug1P28665 1476 aa15.27■□□□□ 0.03
Prpf40b-208ENSMUST00000136980 Kif27Q7M6Z4 1394 aa15.26■□□□□ 0.03
Prpf40b-208ENSMUST00000136980 NgefQ8CHT1 710 aa15.26■□□□□ 0.03
Prpf40b-208ENSMUST00000136980 Iqcf3Q9D498 203 aa15.25■□□□□ 0.03
Prpf40b-208ENSMUST00000136980 Rprd2Q6NXI6 1469 aaKnown RBP15.24■□□□□ 0.03
Prpf40b-208ENSMUST00000136980 Dhx9O70133 1380 aaKnown RBP15.24■□□□□ 0.03
Prpf40b-208ENSMUST00000136980 Card11Q8CIS0 1159 aa15.23■□□□□ 0.03
Prpf40b-208ENSMUST00000136980 Samd9lQ69Z37 1561 aa15.22■□□□□ 0.03
Prpf40b-208ENSMUST00000136980 Dapk1Q80YE7 1442 aa15.22■□□□□ 0.03
Prpf40b-208ENSMUST00000136980 B4galnt3Q6L8S8 986 aa15.22■□□□□ 0.03
Prpf40b-208ENSMUST00000136980 Vgll3P85442 326 aa15.22■□□□□ 0.03
Prpf40b-208ENSMUST00000136980 Ift140E9PY46 1464 aa15.22■□□□□ 0.03
Prpf40b-208ENSMUST00000136980 EprsQ8CGC7 1512 aaKnown RBP15.22■□□□□ 0.03
Prpf40b-208ENSMUST00000136980 Zbtb7cQ8VCZ7 619 aa15.22■□□□□ 0.03
Prpf40b-208ENSMUST00000136980 NexmifQ5DTT1 1515 aa15.21■□□□□ 0.03
Prpf40b-208ENSMUST00000136980 Rpgrip1lQ8CG73 1264 aa15.21■□□□□ 0.03
Prpf40b-208ENSMUST00000136980 Pdcl3Q8BVF2 240 aa15.21■□□□□ 0.02
Prpf40b-208ENSMUST00000136980 SynmQ70IV5 1561 aa15.19■□□□□ 0.02
Prpf40b-208ENSMUST00000136980 Trak1Q6PD31 939 aa15.19■□□□□ 0.02
Prpf40b-208ENSMUST00000136980 Lmtk2Q3TYD6 1471 aa15.19■□□□□ 0.02
Prpf40b-208ENSMUST00000136980 Gpatch8A2A6A1 1505 aa15.18■□□□□ 0.02
Prpf40b-208ENSMUST00000136980 BC005561E9Q5E2 1589 aa15.18■□□□□ 0.02
Prpf40b-208ENSMUST00000136980 Q7TT23 1179 aa15.18■□□□□ 0.02
Prpf40b-208ENSMUST00000136980 Dnttip2Q8R2M2 758 aaKnown RBP15.18■□□□□ 0.02
Prpf40b-208ENSMUST00000136980 Dbr1Q923B1 550 aa15.18■□□□□ 0.02
Prpf40b-208ENSMUST00000136980 Plb1Q3TTY0 1478 aa15.18■□□□□ 0.02
Prpf40b-208ENSMUST00000136980 Zfp444Q3TDV8 331 aaKnown RBP15.18■□□□□ 0.02
Prpf40b-208ENSMUST00000136980 Cwc22Q8C5N3 908 aaKnown RBP15.18■□□□□ 0.02
Prpf40b-208ENSMUST00000136980 Setd1bQ8CFT2 1985 aa15.18■□□□□ 0.02
Prpf40b-208ENSMUST00000136980 DmtnQ9WV69 405 aa15.17■□□□□ 0.02
Prpf40b-208ENSMUST00000136980 Abcc5Q9R1X5 1436 aa15.17■□□□□ 0.02
Prpf40b-208ENSMUST00000136980 Disp1Q3TDN0 1521 aa15.17■□□□□ 0.02
Prpf40b-208ENSMUST00000136980 Plekhg5Q66T02 1073 aa15.17■□□□□ 0.02
Prpf40b-208ENSMUST00000136980 Fhod3Q76LL6 1578 aa15.16■□□□□ 0.02
Prpf40b-208ENSMUST00000136980 Setbp1Q9Z180 1582 aa15.14■□□□□ 0.01
Prpf40b-208ENSMUST00000136980 CadpsQ80TJ1 1355 aa15.14■□□□□ 0.01
Prpf40b-208ENSMUST00000136980 Znf692Q3U381 531 aa15.14■□□□□ 0.01
Prpf40b-208ENSMUST00000136980 Ttll13A4Q9F6 804 aa15.13■□□□□ 0.01
Prpf40b-208ENSMUST00000136980 CanxP35564 591 aaKnown RBP15.13■□□□□ 0.01
Prpf40b-208ENSMUST00000136980 Myom3A2ABU4 1439 aa15.13■□□□□ 0.01
Prpf40b-208ENSMUST00000136980 Dhx57Q6P5D3 1388 aaKnown RBP15.13■□□□□ 0.01
Prpf40b-208ENSMUST00000136980 Plekhh2Q8C115 1491 aa15.12■□□□□ 0.01
Prpf40b-208ENSMUST00000136980 Ttll5Q8CHB8 1328 aa15.12■□□□□ 0.01
Prpf40b-208ENSMUST00000136980 Mtus2Q3UHD3 1353 aa15.11■□□□□ 0.01
Prpf40b-208ENSMUST00000136980 Polr1aO35134 1717 aaKnown RBP15.11■□□□□ 0.01
Prpf40b-208ENSMUST00000136980 Anp32bQ9EST5 272 aaKnown RBP15.11■□□□□ 0.01
Prpf40b-208ENSMUST00000136980 Gtf2a1Q99PM3 378 aa15.1■□□□□ 0.01
Prpf40b-208ENSMUST00000136980 Pik3c2gO70167 1506 aa15.1■□□□□ 0.01
Prpf40b-208ENSMUST00000136980 Chrna2Q91X60 512 aa15.1■□□□□ 0.01
Prpf40b-208ENSMUST00000136980 Apbb1Q9QXJ1 710 aa15.1■□□□□ 0.01
Prpf40b-208ENSMUST00000136980 Arhgef40Q3UPH7 1517 aa15.1■□□□□ 0.01
Prpf40b-208ENSMUST00000136980 Kank1E9Q238 1360 aa15.09■□□□□ 0.01
Prpf40b-208ENSMUST00000136980 Sart3Q9JLI8 962 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms