RNA–Protein interactions for RNA: ENSMUST00000122063.7

Ift88-201, Transcript of Intraflagellar transport protein 88 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ift88, Length 3,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88-201ENSMUST00000122063 Kdm6bQ5NCY0 1641 aa15.44■□□□□ 0.06
Ift88-201ENSMUST00000122063 Cul7Q8VE73 1689 aa15.43■□□□□ 0.06
Ift88-201ENSMUST00000122063 Cc2d2bA0A286YDU8 1405 aa15.43■□□□□ 0.06
Ift88-201ENSMUST00000122063 Abcc2Q8VI47 1543 aa15.43■□□□□ 0.06
Ift88-201ENSMUST00000122063 Zbtb7cQ8VCZ7 619 aa15.42■□□□□ 0.06
Ift88-201ENSMUST00000122063 Usp47Q8BY87 1376 aa15.42■□□□□ 0.06
Ift88-201ENSMUST00000122063 Arhgef11Q68FM7 1552 aa15.41■□□□□ 0.06
Ift88-201ENSMUST00000122063 Adcy10Q8C0T9 1614 aa15.4■□□□□ 0.06
Ift88-201ENSMUST00000122063 Hnrnpul2Q00PI9 745 aaKnown RBP15.4■□□□□ 0.06
Ift88-201ENSMUST00000122063 Rfx7F8VPJ6 1459 aa15.4■□□□□ 0.06
Ift88-201ENSMUST00000122063 Cdc42bpaQ3UU96 1719 aa15.38■□□□□ 0.05
Ift88-201ENSMUST00000122063 AknaQ80VW7 1404 aa15.38■□□□□ 0.05
Ift88-201ENSMUST00000122063 Ccdc141E9Q8Q6 1531 aa15.38■□□□□ 0.05
Ift88-201ENSMUST00000122063 Tdrd9Q14BI7 1383 aa15.37■□□□□ 0.05
Ift88-201ENSMUST00000122063 Stra8P70278 393 aa15.37■□□□□ 0.05
Ift88-201ENSMUST00000122063 Prex2Q3LAC4 1598 aa15.37■□□□□ 0.05
Ift88-201ENSMUST00000122063 SphkapQ6NSW3 1687 aa15.36■□□□□ 0.05
Ift88-201ENSMUST00000122063 Adgrb2Q8CGM1 1561 aa15.36■□□□□ 0.05
Ift88-201ENSMUST00000122063 Fhod3Q76LL6 1578 aa15.36■□□□□ 0.05
Ift88-201ENSMUST00000122063 Magi1Q6RHR9 1471 aa15.35■□□□□ 0.05
Ift88-201ENSMUST00000122063 Rgl3Q3UYI5 709 aa15.35■□□□□ 0.05
Ift88-201ENSMUST00000122063 Neo1P97798 1493 aa15.35■□□□□ 0.05
Ift88-201ENSMUST00000122063 Camsap2Q8C1B1 1461 aa15.33■□□□□ 0.04
Ift88-201ENSMUST00000122063 Dhx57Q6P5D3 1388 aaKnown RBP15.33■□□□□ 0.04
Ift88-201ENSMUST00000122063 Mroh2aD3Z750 1679 aa15.32■□□□□ 0.04
Ift88-201ENSMUST00000122063 Trak1Q6PD31 939 aa15.32■□□□□ 0.04
Ift88-201ENSMUST00000122063 Tnnt3Q9QZ47 272 aa15.32■□□□□ 0.04
Ift88-201ENSMUST00000122063 Kdm3bQ6ZPY7 1562 aa15.32■□□□□ 0.04
Ift88-201ENSMUST00000122063 Kiaa1551Q5DTW7 1521 aa15.31■□□□□ 0.04
Ift88-201ENSMUST00000122063 Aplp2Q06335 707 aa15.3■□□□□ 0.04
Ift88-201ENSMUST00000122063 Rusc2Q80U22 1514 aa15.3■□□□□ 0.04
Ift88-201ENSMUST00000122063 Rprd2Q6NXI6 1469 aaKnown RBP15.3■□□□□ 0.04
Ift88-201ENSMUST00000122063 Dhx9O70133 1380 aaKnown RBP15.29■□□□□ 0.04
Ift88-201ENSMUST00000122063 SafbD3YXK2 937 aaKnown RBP15.29■□□□□ 0.04
Ift88-201ENSMUST00000122063 Smg6P61406 1418 aaKnown RBP15.28■□□□□ 0.04
Ift88-201ENSMUST00000122063 Jph4Q80WT0 628 aa15.28■□□□□ 0.04
Ift88-201ENSMUST00000122063 Il16O54824 1322 aa15.28■□□□□ 0.04
Ift88-201ENSMUST00000122063 Setbp1Q9Z180 1582 aa15.27■□□□□ 0.04
Ift88-201ENSMUST00000122063 AlkP97793 1621 aa15.27■□□□□ 0.03
Ift88-201ENSMUST00000122063 Ttll5Q8CHB8 1328 aa15.27■□□□□ 0.03
Ift88-201ENSMUST00000122063 Fam163aQ8CAA5 168 aa15.25■□□□□ 0.03
Ift88-201ENSMUST00000122063 CenpbP27790 599 aa15.25■□□□□ 0.03
Ift88-201ENSMUST00000122063 Znf710Q3U288 666 aa15.25■□□□□ 0.03
Ift88-201ENSMUST00000122063 Ifnlr1Q8CGK5 535 aa15.25■□□□□ 0.03
Ift88-201ENSMUST00000122063 Map3k4O08648 1597 aa15.25■□□□□ 0.03
Ift88-201ENSMUST00000122063 Zcchc11B2RX14 1644 aaKnown RBP15.24■□□□□ 0.03
Ift88-201ENSMUST00000122063 Grwd1Q810D6 446 aaKnown RBP15.23■□□□□ 0.03
Ift88-201ENSMUST00000122063 Nup155Q99P88 1391 aaKnown RBP15.23■□□□□ 0.03
Ift88-201ENSMUST00000122063 Mapkbp1Q6NS57 1503 aa15.23■□□□□ 0.03
Ift88-201ENSMUST00000122063 Dnmt1P13864 1620 aaKnown RBP15.23■□□□□ 0.03
Ift88-201ENSMUST00000122063 Pprc1Q6NZN1 1644 aa15.22■□□□□ 0.03
Ift88-201ENSMUST00000122063 Mrs2Q5NCE8 434 aa15.22■□□□□ 0.03
Ift88-201ENSMUST00000122063 Map4P27546 1125 aaKnown RBP15.22■□□□□ 0.03
Ift88-201ENSMUST00000122063 Supt6hQ62383 1726 aaKnown RBP15.22■□□□□ 0.03
Ift88-201ENSMUST00000122063 Rrp7aQ9D1C9 280 aaKnown RBP15.21■□□□□ 0.03
Ift88-201ENSMUST00000122063 Pik3c2gO70167 1506 aa15.21■□□□□ 0.03
Ift88-201ENSMUST00000122063 Arhgef12Q8R4H2 1543 aaKnown RBP15.21■□□□□ 0.03
Ift88-201ENSMUST00000122063 Zbtb4Q5F293 982 aa15.21■□□□□ 0.03
Ift88-201ENSMUST00000122063 Eif5bQ05D44 1216 aaKnown RBP15.19■□□□□ 0.02
Ift88-201ENSMUST00000122063 Mlh3A0A1Y7VMP7 1443 aa15.18■□□□□ 0.02
Ift88-201ENSMUST00000122063 Wwc2Q6NXJ0 1187 aa15.18■□□□□ 0.02
Ift88-201ENSMUST00000122063 Fgd6Q69ZL1 1399 aa15.18■□□□□ 0.02
Ift88-201ENSMUST00000122063 Ncoa1P70365 1447 aa15.17■□□□□ 0.02
Ift88-201ENSMUST00000122063 Rundc1Q0VDN7 615 aa15.17■□□□□ 0.02
Ift88-201ENSMUST00000122063 Lamc1P02468 1607 aaKnown RBP15.17■□□□□ 0.02
Ift88-201ENSMUST00000122063 Arhgap5P97393 1501 aa15.17■□□□□ 0.02
Ift88-201ENSMUST00000122063 Kif14L0N7N1 1674 aaKnown RBP15.17■□□□□ 0.02
Ift88-201ENSMUST00000122063 Eif4g3Q80XI3 1579 aaKnown RBP15.16■□□□□ 0.02
Ift88-201ENSMUST00000122063 Fancd2Q80V62 1450 aa15.16■□□□□ 0.02
Ift88-201ENSMUST00000122063 Dapk1Q80YE7 1442 aa15.16■□□□□ 0.02
Ift88-201ENSMUST00000122063 NrdcQ8BHG1 1161 aa15.15■□□□□ 0.02
Ift88-201ENSMUST00000122063 Card11Q8CIS0 1159 aa15.15■□□□□ 0.02
Ift88-201ENSMUST00000122063 Caskin1Q6P9K8 1431 aa15.14■□□□□ 0.01
Ift88-201ENSMUST00000122063 Sart1Q9Z315 806 aaKnown RBP15.14■□□□□ 0.01
Ift88-201ENSMUST00000122063 Kif21bQ9QXL1 1668 aa15.14■□□□□ 0.01
Ift88-201ENSMUST00000122063 Exoc6Q8R313 802 aa15.13■□□□□ 0.01
Ift88-201ENSMUST00000122063 Rrbp1Q99PL5 1605 aaKnown RBP15.13■□□□□ 0.01
Ift88-201ENSMUST00000122063 Gm14025A2AP89 1413 aa15.13■□□□□ 0.01
Ift88-201ENSMUST00000122063 Trappc8E9PWG2 1437 aa15.11■□□□□ 0.01
Ift88-201ENSMUST00000122063 Wdr7Q920I9 1489 aa15.11■□□□□ 0.01
Ift88-201ENSMUST00000122063 Mug2P28666 1451 aa15.09■□□□□ 0.01
Ift88-201ENSMUST00000122063 Fmn2Q9JL04 1578 aa15.08■□□□□ 0
Ift88-201ENSMUST00000122063 Ssh2Q5SW75 1423 aa15.07■□□□□ 0
Ift88-201ENSMUST00000122063 Gm13695A2AK44 830 aa15.07■□□□□ 0
Ift88-201ENSMUST00000122063 Cwc22Q8C5N3 908 aaKnown RBP15.07■□□□□ 0
Ift88-201ENSMUST00000122063 Calr4Q3TQS0 420 aa15.07■□□□□ 0
Ift88-201ENSMUST00000122063 Cdk13Q69ZA1 1511 aaKnown RBP15.07■□□□□ 0
Ift88-201ENSMUST00000122063 Clstn2Q9ER65 966 aa15.06■□□□□ 0
Ift88-201ENSMUST00000122063 Fam208aQ69ZR9 1610 aaKnown RBP15.06■□□□□ 0
Ift88-201ENSMUST00000122063 Erich6D3Z6S9 713 aa15.06■□□□□ 0
Ift88-201ENSMUST00000122063 Slc4a2P13808 1237 aaKnown RBP15.05■□□□□ -0
Ift88-201ENSMUST00000122063 Trpm2Q91YD4 1506 aa15.05■□□□□ -0
Ift88-201ENSMUST00000122063 P3h3Q8CG70 732 aa15.04■□□□□ -0
Ift88-201ENSMUST00000122063 Myom3A2ABU4 1439 aa15.04■□□□□ -0
Ift88-201ENSMUST00000122063 Lrrc9Q8CDN9 1456 aa15.03■□□□□ -0
Ift88-201ENSMUST00000122063 Map3k5O35099 1380 aa15.02■□□□□ -0
Ift88-201ENSMUST00000122063 Cd109Q8R422 1442 aa15.02■□□□□ -0
Ift88-201ENSMUST00000122063 Mbd5B1AYB6 1498 aa15.02■□□□□ -0
Ift88-201ENSMUST00000122063 Pelp1Q9DBD5 1123 aaKnown RBP15.02□□□□□ -0.01
Ift88-201ENSMUST00000122063 Abcc1O35379 1528 aa15.01□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 9.2 ms