RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Dnmt1P13864 1620 aaKnown RBP15.1■□□□□ 0.01
Prpf40b-202ENSMUST00000118287 Anp32aO35381 247 aa15.09■□□□□ 0.01
Prpf40b-202ENSMUST00000118287 Map3k4O08648 1597 aa15.08■□□□□ 0.01
Prpf40b-202ENSMUST00000118287 Rsph4aQ8BYM7 716 aa15.08■□□□□ 0
Prpf40b-202ENSMUST00000118287 Stra8P70278 393 aa15.08■□□□□ 0
Prpf40b-202ENSMUST00000118287 Scaf1Q5U4C3 1256 aaKnown RBP15.06■□□□□ 0
Prpf40b-202ENSMUST00000118287 Pelp1Q9DBD5 1123 aaKnown RBP15.05■□□□□ -0
Prpf40b-202ENSMUST00000118287 Znf316Q6PGE4 1016 aa15.04■□□□□ -0
Prpf40b-202ENSMUST00000118287 Zcchc11B2RX14 1644 aaKnown RBP15.04■□□□□ -0
Prpf40b-202ENSMUST00000118287 Arhgap31A6X8Z5 1425 aa15.03■□□□□ -0
Prpf40b-202ENSMUST00000118287 Calr4Q3TQS0 420 aa15.02■□□□□ -0
Prpf40b-202ENSMUST00000118287 Jph4Q80WT0 628 aa15.02■□□□□ -0
Prpf40b-202ENSMUST00000118287 3425401B19RikD3Z1D3 1412 aa15.02□□□□□ -0.01
Prpf40b-202ENSMUST00000118287 Rapgef6Q5NCJ1 1609 aa15.02□□□□□ -0.01
Prpf40b-202ENSMUST00000118287 Zfp777B9EKF4 885 aa15.01□□□□□ -0.01
Prpf40b-202ENSMUST00000118287 Nolc1E9Q5C9 702 aaKnown RBP15.01□□□□□ -0.01
Prpf40b-202ENSMUST00000118287 Hspa5P20029 655 aaKnown RBP15.01□□□□□ -0.01
Prpf40b-202ENSMUST00000118287 Ccer2J3QPU5 274 aa15.01□□□□□ -0.01
Prpf40b-202ENSMUST00000118287 Ncoa3O09000 1398 aa15□□□□□ -0.01
Prpf40b-202ENSMUST00000118287 NexmifQ5DTT1 1515 aa14.99□□□□□ -0.01
Prpf40b-202ENSMUST00000118287 Ccnb3Q810T2 1396 aa14.99□□□□□ -0.01
Prpf40b-202ENSMUST00000118287 Arhgef12Q8R4H2 1543 aaKnown RBP14.99□□□□□ -0.01
Prpf40b-202ENSMUST00000118287 Mia2Q91ZV0 1396 aa14.98□□□□□ -0.01
Prpf40b-202ENSMUST00000118287 Abcc1O35379 1528 aa14.97□□□□□ -0.01
Prpf40b-202ENSMUST00000118287 Fhad1A6PWD2 1420 aa14.97□□□□□ -0.01
Prpf40b-202ENSMUST00000118287 Mug1P28665 1476 aa14.97□□□□□ -0.01
Prpf40b-202ENSMUST00000118287 Ccdc141E9Q8Q6 1531 aa14.96□□□□□ -0.01
Prpf40b-202ENSMUST00000118287 UacaQ8CGB3 1411 aa14.96□□□□□ -0.02
Prpf40b-202ENSMUST00000118287 Gm14025A2AP89 1413 aa14.95□□□□□ -0.02
Prpf40b-202ENSMUST00000118287 Sin3aQ60520 1274 aaKnown RBP14.95□□□□□ -0.02
Prpf40b-202ENSMUST00000118287 Arhgef11Q68FM7 1552 aa14.95□□□□□ -0.02
Prpf40b-202ENSMUST00000118287 Ankrd36D3Z4K0 1415 aa14.95□□□□□ -0.02
Prpf40b-202ENSMUST00000118287 Mroh2aD3Z750 1679 aa14.94□□□□□ -0.02
Prpf40b-202ENSMUST00000118287 Chd1P40201 1711 aa14.93□□□□□ -0.02
Prpf40b-202ENSMUST00000118287 Gm13697A2AK42 830 aa14.92□□□□□ -0.02
Prpf40b-202ENSMUST00000118287 Vps8Q0P5W1 1427 aa14.92□□□□□ -0.02
Prpf40b-202ENSMUST00000118287 Lmtk2Q3TYD6 1471 aa14.91□□□□□ -0.02
Prpf40b-202ENSMUST00000118287 Ncoa2Q61026 1462 aa14.9□□□□□ -0.02
Prpf40b-202ENSMUST00000118287 Magi1Q6RHR9 1471 aa14.9□□□□□ -0.02
Prpf40b-202ENSMUST00000118287 Prex2Q3LAC4 1598 aa14.9□□□□□ -0.02
Prpf40b-202ENSMUST00000118287 Naip2Q9QUK4 1447 aa14.89□□□□□ -0.03
Prpf40b-202ENSMUST00000118287 Pabpn1Q8CCS6 302 aaKnown RBP14.89□□□□□ -0.03
Prpf40b-202ENSMUST00000118287 Chic2Q9D9G3 165 aa14.89□□□□□ -0.03
Prpf40b-202ENSMUST00000118287 Ppp4r2Q0VGB7 417 aa14.88□□□□□ -0.03
Prpf40b-202ENSMUST00000118287 Cdc42bpaQ3UU96 1719 aa14.88□□□□□ -0.03
Prpf40b-202ENSMUST00000118287 Rrbp1Q99PL5 1605 aaKnown RBP14.88□□□□□ -0.03
Prpf40b-202ENSMUST00000118287 A2mQ6GQT1 1474 aa14.87□□□□□ -0.03
Prpf40b-202ENSMUST00000118287 Q8BT18 775 aa14.86□□□□□ -0.03
Prpf40b-202ENSMUST00000118287 Gcc2Q8CHG3 1679 aa14.85□□□□□ -0.03
Prpf40b-202ENSMUST00000118287 Supt16hQ920B9 1047 aa14.85□□□□□ -0.03
Prpf40b-202ENSMUST00000118287 Ythdc2B2RR83 1445 aaKnown RBP14.85□□□□□ -0.03
Prpf40b-202ENSMUST00000118287 Kiaa1551Q5DTW7 1521 aa14.84□□□□□ -0.03
Prpf40b-202ENSMUST00000118287 Arhgef40Q3UPH7 1517 aa14.84□□□□□ -0.03
Prpf40b-202ENSMUST00000118287 Plcd4Q8K3R3 807 aa14.83□□□□□ -0.04
Prpf40b-202ENSMUST00000118287 P3h3Q8CG70 732 aa14.82□□□□□ -0.04
Prpf40b-202ENSMUST00000118287 PtprtQ99M80 1454 aa14.81□□□□□ -0.04
Prpf40b-202ENSMUST00000118287 Fam163aQ8CAA5 168 aa14.81□□□□□ -0.04
Prpf40b-202ENSMUST00000118287 Gapvd1Q6PAR5 1458 aa14.81□□□□□ -0.04
Prpf40b-202ENSMUST00000118287 Dhx57Q6P5D3 1388 aaKnown RBP14.8□□□□□ -0.04
Prpf40b-202ENSMUST00000118287 Kdm6bQ5NCY0 1641 aa14.8□□□□□ -0.04
Prpf40b-202ENSMUST00000118287 Adcy10Q8C0T9 1614 aa14.8□□□□□ -0.04
Prpf40b-202ENSMUST00000118287 Fancd2Q80V62 1450 aa14.8□□□□□ -0.04
Prpf40b-202ENSMUST00000118287 Cul7Q8VE73 1689 aa14.79□□□□□ -0.04
Prpf40b-202ENSMUST00000118287 Mapkbp1Q6NS57 1503 aa14.79□□□□□ -0.04
Prpf40b-202ENSMUST00000118287 Znf608Q56A10 1511 aa14.77□□□□□ -0.04
Prpf40b-202ENSMUST00000118287 Wdr43Q6ZQL4 677 aaKnown RBP14.77□□□□□ -0.04
Prpf40b-202ENSMUST00000118287 Cabp1Q9JLK7 227 aa14.77□□□□□ -0.05
Prpf40b-202ENSMUST00000118287 Smg6P61406 1418 aaKnown RBP14.76□□□□□ -0.05
Prpf40b-202ENSMUST00000118287 Tdrd9Q14BI7 1383 aa14.76□□□□□ -0.05
Prpf40b-202ENSMUST00000118287 Rtl5Q5DTT4 599 aa14.76□□□□□ -0.05
Prpf40b-202ENSMUST00000118287 Camsap2Q8C1B1 1461 aa14.76□□□□□ -0.05
Prpf40b-202ENSMUST00000118287 Naip5Q9R016 1403 aa14.75□□□□□ -0.05
Prpf40b-202ENSMUST00000118287 Mrs2Q5NCE8 434 aa14.75□□□□□ -0.05
Prpf40b-202ENSMUST00000118287 Arid3cA6PWV5 409 aa14.74□□□□□ -0.05
Prpf40b-202ENSMUST00000118287 Abcc5Q9R1X5 1436 aa14.74□□□□□ -0.05
Prpf40b-202ENSMUST00000118287 Dennd4bQ3U1Y4 1499 aa14.74□□□□□ -0.05
Prpf40b-202ENSMUST00000118287 Cep170Q6A065 1588 aa14.74□□□□□ -0.05
Prpf40b-202ENSMUST00000118287 NhsB1AV60 1647 aa14.74□□□□□ -0.05
Prpf40b-202ENSMUST00000118287 Ncbp3Q8BZR9 615 aaKnown RBP14.72□□□□□ -0.05
Prpf40b-202ENSMUST00000118287 Gtf3c3Q3TMP1 882 aa14.72□□□□□ -0.05
Prpf40b-202ENSMUST00000118287 Atp10dQ8K2X1 1416 aa14.72□□□□□ -0.05
Prpf40b-202ENSMUST00000118287 Plekhh2Q8C115 1491 aa14.71□□□□□ -0.05
Prpf40b-202ENSMUST00000118287 Mphosph9A6H5Y1 991 aa14.71□□□□□ -0.05
Prpf40b-202ENSMUST00000118287 Wwc2Q6NXJ0 1187 aa14.71□□□□□ -0.05
Prpf40b-202ENSMUST00000118287 Fhod3Q76LL6 1578 aa14.7□□□□□ -0.06
Prpf40b-202ENSMUST00000118287 Fam208aQ69ZR9 1610 aaKnown RBP14.7□□□□□ -0.06
Prpf40b-202ENSMUST00000118287 Mtus2Q3UHD3 1353 aa14.7□□□□□ -0.06
Prpf40b-202ENSMUST00000118287 Pak3Q61036 559 aa14.69□□□□□ -0.06
Prpf40b-202ENSMUST00000118287 Gm156Q58A37 223 aa14.68□□□□□ -0.06
Prpf40b-202ENSMUST00000118287 Slc4a3P16283 1227 aa14.68□□□□□ -0.06
Prpf40b-202ENSMUST00000118287 Slc4a1apE9PX68 744 aa14.67□□□□□ -0.06
Prpf40b-202ENSMUST00000118287 Arhgap5P97393 1501 aa14.67□□□□□ -0.06
Prpf40b-202ENSMUST00000118287 Washc2Q6PGL7 1334 aa14.67□□□□□ -0.06
Prpf40b-202ENSMUST00000118287 Mlh3A0A1Y7VMP7 1443 aa14.66□□□□□ -0.06
Prpf40b-202ENSMUST00000118287 Lrrc9Q8CDN9 1456 aa14.66□□□□□ -0.06
Prpf40b-202ENSMUST00000118287 Wdr7Q920I9 1489 aa14.65□□□□□ -0.06
Prpf40b-202ENSMUST00000118287 Igf1rQ60751 1373 aa14.65□□□□□ -0.06
Prpf40b-202ENSMUST00000118287 AI481877A2ALV5 1481 aa14.65□□□□□ -0.06
Prpf40b-202ENSMUST00000118287 Zfp644E9QA22 1323 aa14.64□□□□□ -0.07
Prpf40b-202ENSMUST00000118287 SphkapQ6NSW3 1687 aa14.64□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 25.7 ms