RNA–Protein interactions for RNA: ENSMUST00000113717.7

Sptan1-204, Transcript of Spectrin alpha chain, non-erythrocytic 1, mousemouse

TSL 1 (best) BASIC

Gene Sptan1, Length 7,958 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptan1-204ENSMUST00000113717 NacadQ5SWP3 1504 aa13.74□□□□□ -0.21
Sptan1-204ENSMUST00000113717 Arhgap27A2AB59 869 aa13.73□□□□□ -0.21
Sptan1-204ENSMUST00000113717 Stk24Q99KH8 431 aa13.73□□□□□ -0.21
Sptan1-204ENSMUST00000113717 NgefQ8CHT1 710 aa13.72□□□□□ -0.21
Sptan1-204ENSMUST00000113717 Ipo8Q7TMY7 1010 aa13.72□□□□□ -0.21
Sptan1-204ENSMUST00000113717 Pde3bQ61409 1100 aa13.72□□□□□ -0.21
Sptan1-204ENSMUST00000113717 Speer4f1Q9D5Q6 258 aa13.71□□□□□ -0.21
Sptan1-204ENSMUST00000113717 RdxP26043 583 aaKnown RBP13.71□□□□□ -0.21
Sptan1-204ENSMUST00000113717 Anapc15P60007 132 aa13.71□□□□□ -0.22
Sptan1-204ENSMUST00000113717 Cnga1P29974 684 aa13.7□□□□□ -0.22
Sptan1-204ENSMUST00000113717 Rassf8Q8CJ96 419 aa13.7□□□□□ -0.22
Sptan1-204ENSMUST00000113717 Zscan21Q07231 555 aa13.7□□□□□ -0.22
Sptan1-204ENSMUST00000113717 Tmf1B9EKI3 1091 aa13.7□□□□□ -0.22
Sptan1-204ENSMUST00000113717 Cald1E9QA15 768 aaKnown RBP13.69□□□□□ -0.22
Sptan1-204ENSMUST00000113717 Sart3Q9JLI8 962 aaKnown RBP13.69□□□□□ -0.22
Sptan1-204ENSMUST00000113717 Rundc1Q0VDN7 615 aa13.69□□□□□ -0.22
Sptan1-204ENSMUST00000113717 4933402E13RikQ9D4D2 429 aa13.67□□□□□ -0.22
Sptan1-204ENSMUST00000113717 Exoc6Q8R313 802 aa13.67□□□□□ -0.22
Sptan1-204ENSMUST00000113717 SetQ9EQU5 289 aaKnown RBP13.67□□□□□ -0.22
Sptan1-204ENSMUST00000113717 Rtf1A2AQ19 715 aaKnown RBP13.66□□□□□ -0.22
Sptan1-204ENSMUST00000113717 Ddrgk1Q80WW9 315 aa13.65□□□□□ -0.22
Sptan1-204ENSMUST00000113717 U2surpQ6NV83 1029 aaKnown RBP13.65□□□□□ -0.22
Sptan1-204ENSMUST00000113717 Iffo2Q8R2V2 512 aa13.65□□□□□ -0.22
Sptan1-204ENSMUST00000113717 Tpm3-rs7D3Z2H9 248 aa13.64□□□□□ -0.23
Sptan1-204ENSMUST00000113717 R3hcc1Q8BSI6 488 aa13.64□□□□□ -0.23
Sptan1-204ENSMUST00000113717 CgnP59242 1191 aa13.64□□□□□ -0.23
Sptan1-204ENSMUST00000113717 Kiaa0754Q69ZZ9 979 aa13.64□□□□□ -0.23
Sptan1-204ENSMUST00000113717 Mfap1aC0HKD8 439 aaKnown RBP13.63□□□□□ -0.23
Sptan1-204ENSMUST00000113717 Mfap1bC0HKD9 439 aaKnown RBP13.63□□□□□ -0.23
Sptan1-204ENSMUST00000113717 Pkd2O35245 966 aa13.63□□□□□ -0.23
Sptan1-204ENSMUST00000113717 Tmco5bQ80X59 307 aa13.63□□□□□ -0.23
Sptan1-204ENSMUST00000113717 Smarce1O54941 411 aaKnown RBP13.63□□□□□ -0.23
Sptan1-204ENSMUST00000113717 Ercc6F8VPZ5 1481 aa13.63□□□□□ -0.23
Sptan1-204ENSMUST00000113717 Golga2Q921M4 999 aa13.62□□□□□ -0.23
Sptan1-204ENSMUST00000113717 Taok2Q6ZQ29 1240 aa13.62□□□□□ -0.23
Sptan1-204ENSMUST00000113717 Becn1O88597 448 aa13.61□□□□□ -0.23
Sptan1-204ENSMUST00000113717 Eif4g2Q62448 906 aaKnown RBP13.61□□□□□ -0.23
Sptan1-204ENSMUST00000113717 VgfQ0VGU4 617 aa13.6□□□□□ -0.23
Sptan1-204ENSMUST00000113717 MecomP14404 1042 aa13.6□□□□□ -0.23
Sptan1-204ENSMUST00000113717 Cluap1Q8R3P7 413 aa13.59□□□□□ -0.23
Sptan1-204ENSMUST00000113717 U2af1Q9D883 239 aaKnown RBP13.59□□□□□ -0.23
Sptan1-204ENSMUST00000113717 Trim30aP15533 496 aa13.58□□□□□ -0.24
Sptan1-204ENSMUST00000113717 Gtf3c3Q3TMP1 882 aa13.58□□□□□ -0.24
Sptan1-204ENSMUST00000113717 SlkO54988 1233 aa13.58□□□□□ -0.24
Sptan1-204ENSMUST00000113717 Map4P27546 1125 aaKnown RBP13.58□□□□□ -0.24
Sptan1-204ENSMUST00000113717 Gtf2e1Q9D0D5 440 aa13.58□□□□□ -0.24
Sptan1-204ENSMUST00000113717 Map7d2A2AG50 781 aa13.58□□□□□ -0.24
Sptan1-204ENSMUST00000113717 GorabQ8BRM2 368 aa13.58□□□□□ -0.24
Sptan1-204ENSMUST00000113717 Ifit1bl1D3Z6F0 470 aa13.57□□□□□ -0.24
Sptan1-204ENSMUST00000113717 Gpatch11Q3UFS4 262 aa13.57□□□□□ -0.24
Sptan1-204ENSMUST00000113717 Fyco1Q8VDC1 1437 aa13.57□□□□□ -0.24
Sptan1-204ENSMUST00000113717 Atp6v1dP57746 247 aa13.56□□□□□ -0.24
Sptan1-204ENSMUST00000113717 Sin3aQ60520 1274 aaKnown RBP13.56□□□□□ -0.24
Sptan1-204ENSMUST00000113717 Dnai2A2AC93 623 aa13.56□□□□□ -0.24
Sptan1-204ENSMUST00000113717 Ush1cQ9ES64 910 aa13.56□□□□□ -0.24
Sptan1-204ENSMUST00000113717 CntlnA2AM05 1397 aa13.56□□□□□ -0.24
Sptan1-204ENSMUST00000113717 Cspp1B2RX88 1205 aa13.56□□□□□ -0.24
Sptan1-204ENSMUST00000113717 Plin1Q8CGN5 517 aa13.56□□□□□ -0.24
Sptan1-204ENSMUST00000113717 Arhgap35Q91YM2 1499 aa13.55□□□□□ -0.24
Sptan1-204ENSMUST00000113717 Rsph3aQ3UFY4 516 aa13.55□□□□□ -0.24
Sptan1-204ENSMUST00000113717 Kif27Q7M6Z4 1394 aa13.54□□□□□ -0.24
Sptan1-204ENSMUST00000113717 Q3TQI7 289 aaKnown RBP13.54□□□□□ -0.24
Sptan1-204ENSMUST00000113717 Znf330Q922H9 316 aa13.54□□□□□ -0.24
Sptan1-204ENSMUST00000113717 ChgaP26339 463 aaKnown RBP13.54□□□□□ -0.24
Sptan1-204ENSMUST00000113717 Nol10Q5RJG1 687 aaKnown RBP13.54□□□□□ -0.24
Sptan1-204ENSMUST00000113717 Spag9Q58A65 1321 aaKnown RBP13.53□□□□□ -0.24
Sptan1-204ENSMUST00000113717 CrebrfQ8CDG5 640 aaKnown RBP13.53□□□□□ -0.24
Sptan1-204ENSMUST00000113717 Dcaf11Q91VU6 549 aa13.52□□□□□ -0.25
Sptan1-204ENSMUST00000113717 Mphosph9A6H5Y1 991 aa13.52□□□□□ -0.25
Sptan1-204ENSMUST00000113717 Baz1bQ9Z277 1479 aa13.52□□□□□ -0.25
Sptan1-204ENSMUST00000113717 Ccar1Q8CH18 1146 aaKnown RBP13.51□□□□□ -0.25
Sptan1-204ENSMUST00000113717 Ksr2Q3UVC0 959 aa13.51□□□□□ -0.25
Sptan1-204ENSMUST00000113717 Rock2P70336 1388 aa13.51□□□□□ -0.25
Sptan1-204ENSMUST00000113717 CrbnQ8C7D2 445 aa13.5□□□□□ -0.25
Sptan1-204ENSMUST00000113717 Trak1Q6PD31 939 aa13.5□□□□□ -0.25
Sptan1-204ENSMUST00000113717 Ylpm1Q9R0I7 1386 aaKnown RBP13.5□□□□□ -0.25
Sptan1-204ENSMUST00000113717 Cep162Q6ZQ06 1403 aa13.5□□□□□ -0.25
Sptan1-204ENSMUST00000113717 MyclP10166 368 aa13.49□□□□□ -0.25
Sptan1-204ENSMUST00000113717 Tpm3P21107 285 aaKnown RBP13.49□□□□□ -0.25
Sptan1-204ENSMUST00000113717 Stk26Q99JT2 416 aa13.49□□□□□ -0.25
Sptan1-204ENSMUST00000113717 Glipr1l2Q9CQ35 332 aa13.48□□□□□ -0.25
Sptan1-204ENSMUST00000113717 Brpf1B2RRD7 1212 aa13.48□□□□□ -0.25
Sptan1-204ENSMUST00000113717 Ccer1Q9CQL2 403 aa13.48□□□□□ -0.25
Sptan1-204ENSMUST00000113717 Nolc1E9Q5C9 702 aaKnown RBP13.48□□□□□ -0.25
Sptan1-204ENSMUST00000113717 Mre11Q61216 706 aa13.48□□□□□ -0.25
Sptan1-204ENSMUST00000113717 Birc3O08863 600 aa13.47□□□□□ -0.25
Sptan1-204ENSMUST00000113717 Sf3a1Q8K4Z5 791 aaKnown RBP13.46□□□□□ -0.25
Sptan1-204ENSMUST00000113717 St18Q80TY4 1045 aa13.46□□□□□ -0.25
Sptan1-204ENSMUST00000113717 Smg6P61406 1418 aaKnown RBP13.46□□□□□ -0.25
Sptan1-204ENSMUST00000113717 Fmn1Q05860 1466 aa13.46□□□□□ -0.26
Sptan1-204ENSMUST00000113717 Filip1lQ6P6L0 1131 aa13.45□□□□□ -0.26
Sptan1-204ENSMUST00000113717 Cgnl1Q6AW69 1298 aa13.44□□□□□ -0.26
Sptan1-204ENSMUST00000113717 Tnnt1O88346 262 aa13.44□□□□□ -0.26
Sptan1-204ENSMUST00000113717 Ftsj3Q9DBE9 838 aaKnown RBP13.44□□□□□ -0.26
Sptan1-204ENSMUST00000113717 Srcin1Q9QWI6 1250 aa13.44□□□□□ -0.26
Sptan1-204ENSMUST00000113717 Fbxo2Q80UW2 297 aa13.44□□□□□ -0.26
Sptan1-204ENSMUST00000113717 Tpd52l1O54818 204 aa13.44□□□□□ -0.26
Sptan1-204ENSMUST00000113717 Ecm2Q5FW85 670 aa13.44□□□□□ -0.26
Sptan1-204ENSMUST00000113717 Aebp1Q640N1 1128 aa13.43□□□□□ -0.26
Sptan1-204ENSMUST00000113717 Cabp1Q9JLK7 227 aa13.42□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 42.8 ms