RNA–Protein interactions for RNA: ENSMUST00000112251.8

Ubr3-202, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ubr3, Length 8,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-202ENSMUST00000112251 Stag3O70576 1240 aa20.87■□□□□ 0.93
Ubr3-202ENSMUST00000112251 NudcO35685 332 aaKnown RBP20.86■□□□□ 0.93
Ubr3-202ENSMUST00000112251 Slc4a3P16283 1227 aa20.86■□□□□ 0.93
Ubr3-202ENSMUST00000112251 Plin1Q8CGN5 517 aa20.85■□□□□ 0.93
Ubr3-202ENSMUST00000112251 MecomP14404 1042 aa20.85■□□□□ 0.93
Ubr3-202ENSMUST00000112251 Ggt6Q6PDE7 497 aa20.84■□□□□ 0.93
Ubr3-202ENSMUST00000112251 Tpm4Q6IRU2 248 aa20.83■□□□□ 0.93
Ubr3-202ENSMUST00000112251 Samd1D3YXK1 519 aa20.83■□□□□ 0.93
Ubr3-202ENSMUST00000112251 Ubap1lG3UW59 384 aa20.83■□□□□ 0.93
Ubr3-202ENSMUST00000112251 U2surpQ6NV83 1029 aaKnown RBP20.83■□□□□ 0.93
Ubr3-202ENSMUST00000112251 PtmsQ9D0J8 101 aaKnown RBP20.83■□□□□ 0.92
Ubr3-202ENSMUST00000112251 Kri1Q8VDQ9 704 aaKnown RBP20.83■□□□□ 0.92
Ubr3-202ENSMUST00000112251 BlmO88700 1416 aa20.82■□□□□ 0.92
Ubr3-202ENSMUST00000112251 Drc7Q6V3W6 876 aa20.82■□□□□ 0.92
Ubr3-202ENSMUST00000112251 Tomm22Q9CPQ3 142 aa20.79■□□□□ 0.92
Ubr3-202ENSMUST00000112251 Mroh3A0A1D5RM54 893 aa20.79■□□□□ 0.92
Ubr3-202ENSMUST00000112251 Rtf1A2AQ19 715 aaKnown RBP20.78■□□□□ 0.92
Ubr3-202ENSMUST00000112251 CalrP14211 416 aaKnown RBP20.78■□□□□ 0.92
Ubr3-202ENSMUST00000112251 Cnga1P29974 684 aa20.78■□□□□ 0.92
Ubr3-202ENSMUST00000112251 Card11Q8CIS0 1159 aa20.76■□□□□ 0.91
Ubr3-202ENSMUST00000112251 1700123L14RikQ3V2K7 440 aa20.75■□□□□ 0.91
Ubr3-202ENSMUST00000112251 HnrnpuQ8VEK3 800 aaKnown RBP20.75■□□□□ 0.91
Ubr3-202ENSMUST00000112251 Hdgfl1Q2VPR5 283 aa20.73■□□□□ 0.91
Ubr3-202ENSMUST00000112251 Tpm2P58774 284 aa20.73■□□□□ 0.91
Ubr3-202ENSMUST00000112251 Tnnt1O88346 262 aa20.73■□□□□ 0.91
Ubr3-202ENSMUST00000112251 Ccer1Q9CQL2 403 aa20.72■□□□□ 0.91
Ubr3-202ENSMUST00000112251 Stk24Q99KH8 431 aa20.71■□□□□ 0.91
Ubr3-202ENSMUST00000112251 Zrsr2Q62377 462 aaKnown RBP20.7■□□□□ 0.91
Ubr3-202ENSMUST00000112251 Sart3Q9JLI8 962 aaKnown RBP20.7■□□□□ 0.9
Ubr3-202ENSMUST00000112251 Ipo4Q8VI75 1082 aa20.68■□□□□ 0.9
Ubr3-202ENSMUST00000112251 SlkO54988 1233 aa20.68■□□□□ 0.9
Ubr3-202ENSMUST00000112251 Rwdd1Q9CQK7 243 aa20.68■□□□□ 0.9
Ubr3-202ENSMUST00000112251 Ripply1Q2WG77 201 aa20.68■□□□□ 0.9
Ubr3-202ENSMUST00000112251 Odf2A3KGV1 830 aaKnown RBP20.68■□□□□ 0.9
Ubr3-202ENSMUST00000112251 Smarce1O54941 411 aaKnown RBP20.67■□□□□ 0.9
Ubr3-202ENSMUST00000112251 Dusp9Q7TNL7 452 aa20.67■□□□□ 0.9
Ubr3-202ENSMUST00000112251 Gabpb2P81069 414 aa20.67■□□□□ 0.9
Ubr3-202ENSMUST00000112251 Rsph6aQ8CDR2 708 aa20.67■□□□□ 0.9
Ubr3-202ENSMUST00000112251 Pde3bQ61409 1100 aa20.66■□□□□ 0.9
Ubr3-202ENSMUST00000112251 Dnai1Q8C0M8 701 aa20.66■□□□□ 0.9
Ubr3-202ENSMUST00000112251 AcrbpQ3V140 540 aa20.66■□□□□ 0.9
Ubr3-202ENSMUST00000112251 Brpf1B2RRD7 1212 aa20.66■□□□□ 0.9
Ubr3-202ENSMUST00000112251 Tpm1P58771 284 aa20.66■□□□□ 0.9
Ubr3-202ENSMUST00000112251 Fbxo2Q80UW2 297 aa20.65■□□□□ 0.9
Ubr3-202ENSMUST00000112251 Krt82Q99M74 516 aa20.65■□□□□ 0.9
Ubr3-202ENSMUST00000112251 Ccdc34Q3UI66 367 aa20.64■□□□□ 0.9
Ubr3-202ENSMUST00000112251 Mfap1aC0HKD8 439 aaKnown RBP20.64■□□□□ 0.89
Ubr3-202ENSMUST00000112251 Mfap1bC0HKD9 439 aaKnown RBP20.64■□□□□ 0.89
Ubr3-202ENSMUST00000112251 Ppm1fQ8CGA0 452 aa20.64■□□□□ 0.89
Ubr3-202ENSMUST00000112251 Zfp777B9EKF4 885 aa20.64■□□□□ 0.89
Ubr3-202ENSMUST00000112251 Ccdc43Q9CR29 222 aaKnown RBP20.64■□□□□ 0.89
Ubr3-202ENSMUST00000112251 Chmp3Q9CQ10 224 aa20.63■□□□□ 0.89
Ubr3-202ENSMUST00000112251 Mex3cQ05A36 652 aaKnown RBP20.63■□□□□ 0.89
Ubr3-202ENSMUST00000112251 VgfQ0VGU4 617 aa20.63■□□□□ 0.89
Ubr3-202ENSMUST00000112251 GorabQ8BRM2 368 aa20.63■□□□□ 0.89
Ubr3-202ENSMUST00000112251 Senp3Q9EP97 568 aaKnown RBP20.62■□□□□ 0.89
Ubr3-202ENSMUST00000112251 Ccdc47Q9D024 483 aaKnown RBP20.61■□□□□ 0.89
Ubr3-202ENSMUST00000112251 Tmco5bQ80X59 307 aa20.61■□□□□ 0.89
Ubr3-202ENSMUST00000112251 Gm21969J3QJZ1 289 aa20.6■□□□□ 0.89
Ubr3-202ENSMUST00000112251 BbxQ8VBW5 907 aa20.6■□□□□ 0.89
Ubr3-202ENSMUST00000112251 Rufy1Q8BIJ7 712 aa20.6■□□□□ 0.89
Ubr3-202ENSMUST00000112251 Mbd3Q9Z2D8 285 aaKnown RBP20.59■□□□□ 0.89
Ubr3-202ENSMUST00000112251 A0A0U1RNP2 1173 aa20.59■□□□□ 0.89
Ubr3-202ENSMUST00000112251 Taf3Q5HZG4 932 aa20.57■□□□□ 0.88
Ubr3-202ENSMUST00000112251 Q3TQI7 289 aaKnown RBP20.57■□□□□ 0.88
Ubr3-202ENSMUST00000112251 Znf330Q922H9 316 aa20.57■□□□□ 0.88
Ubr3-202ENSMUST00000112251 Cspp1B2RX88 1205 aa20.56■□□□□ 0.88
Ubr3-202ENSMUST00000112251 Ddrgk1Q80WW9 315 aa20.55■□□□□ 0.88
Ubr3-202ENSMUST00000112251 Znf771Q8BJ90 317 aa20.55■□□□□ 0.88
Ubr3-202ENSMUST00000112251 Sf3a1Q8K4Z5 791 aaKnown RBP20.55■□□□□ 0.88
Ubr3-202ENSMUST00000112251 EspnQ9ET47 871 aa20.54■□□□□ 0.88
Ubr3-202ENSMUST00000112251 SafbD3YXK2 937 aaKnown RBP20.53■□□□□ 0.88
Ubr3-202ENSMUST00000112251 Fnbp4Q6ZQ03 1031 aa20.52■□□□□ 0.88
Ubr3-202ENSMUST00000112251 Cluap1Q8R3P7 413 aa20.52■□□□□ 0.88
Ubr3-202ENSMUST00000112251 Ubl4bQ9CQ84 188 aa20.52■□□□□ 0.88
Ubr3-202ENSMUST00000112251 Ush1cQ9ES64 910 aa20.5■□□□□ 0.87
Ubr3-202ENSMUST00000112251 Supt16hQ920B9 1047 aa20.5■□□□□ 0.87
Ubr3-202ENSMUST00000112251 Chmp5Q9D7S9 219 aa20.5■□□□□ 0.87
Ubr3-202ENSMUST00000112251 Cwc22Q8C5N3 908 aaKnown RBP20.49■□□□□ 0.87
Ubr3-202ENSMUST00000112251 Ipo8Q7TMY7 1010 aa20.49■□□□□ 0.87
Ubr3-202ENSMUST00000112251 Pnmal2G3X9N3 661 aa20.48■□□□□ 0.87
Ubr3-202ENSMUST00000112251 Znf704Q9ERQ3 566 aa20.48■□□□□ 0.87
Ubr3-202ENSMUST00000112251 Utp3Q9JI13 469 aaKnown RBP20.48■□□□□ 0.87
Ubr3-202ENSMUST00000112251 Chaf1aQ9QWF0 911 aa20.48■□□□□ 0.87
Ubr3-202ENSMUST00000112251 Ipo9Q91YE6 1041 aa20.48■□□□□ 0.87
Ubr3-202ENSMUST00000112251 Wdr78E9PYY5 807 aa20.47■□□□□ 0.87
Ubr3-202ENSMUST00000112251 Nap1l1P28656 391 aaKnown RBP20.47■□□□□ 0.87
Ubr3-202ENSMUST00000112251 Sycp1Q62209 993 aa20.47■□□□□ 0.87
Ubr3-202ENSMUST00000112251 Speer4f1Q9D5Q6 258 aa20.46■□□□□ 0.87
Ubr3-202ENSMUST00000112251 Hap1O35668 628 aa20.46■□□□□ 0.87
Ubr3-202ENSMUST00000112251 Znhit6Q3UFB2 460 aaKnown RBP20.44■□□□□ 0.86
Ubr3-202ENSMUST00000112251 Ccar1Q8CH18 1146 aaKnown RBP20.44■□□□□ 0.86
Ubr3-202ENSMUST00000112251 Polr3gQ6NXY9 223 aa20.42■□□□□ 0.86
Ubr3-202ENSMUST00000112251 Rrp7aQ9D1C9 280 aaKnown RBP20.42■□□□□ 0.86
Ubr3-202ENSMUST00000112251 HmmrQ00547 794 aaKnown RBP20.42■□□□□ 0.86
Ubr3-202ENSMUST00000112251 Tcerg1Q8CGF7 1100 aaKnown RBP20.41■□□□□ 0.86
Ubr3-202ENSMUST00000112251 Anp32eP97822 260 aaKnown RBP20.41■□□□□ 0.86
Ubr3-202ENSMUST00000112251 Ipo7Q9EPL8 1038 aaKnown RBP20.41■□□□□ 0.86
Ubr3-202ENSMUST00000112251 Gcom1E9PZ54 550 aa20.41■□□□□ 0.86
Ubr3-202ENSMUST00000112251 MyzapQ3UIJ9 466 aa20.41■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 15.3 ms