RNA–Protein interactions for RNA: ENSMUST00000108810.9

Trim11-203, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-203ENSMUST00000108810 Wdr66E9Q743 1299 aa21.72■■□□□ 1.07
Trim11-203ENSMUST00000108810 Chic2Q9D9G3 165 aa21.71■■□□□ 1.07
Trim11-203ENSMUST00000108810 Plekhh2Q8C115 1491 aa21.71■■□□□ 1.07
Trim11-203ENSMUST00000108810 Fam163aQ8CAA5 168 aa21.7■■□□□ 1.06
Trim11-203ENSMUST00000108810 Jph4Q80WT0 628 aa21.68■■□□□ 1.06
Trim11-203ENSMUST00000108810 AknaQ80VW7 1404 aa21.68■■□□□ 1.06
Trim11-203ENSMUST00000108810 SphkapQ6NSW3 1687 aa21.66■■□□□ 1.06
Trim11-203ENSMUST00000108810 Setbp1Q9Z180 1582 aa21.66■■□□□ 1.06
Trim11-203ENSMUST00000108810 Kdm3bQ6ZPY7 1562 aa21.64■■□□□ 1.05
Trim11-203ENSMUST00000108810 Fam208aQ69ZR9 1610 aaKnown RBP21.63■■□□□ 1.05
Trim11-203ENSMUST00000108810 Cabp1Q9JLK7 227 aa21.63■■□□□ 1.05
Trim11-203ENSMUST00000108810 Fancd2Q80V62 1450 aa21.62■■□□□ 1.05
Trim11-203ENSMUST00000108810 Mlh3A0A1Y7VMP7 1443 aa21.61■■□□□ 1.05
Trim11-203ENSMUST00000108810 Chd1P40201 1711 aa21.6■■□□□ 1.05
Trim11-203ENSMUST00000108810 Mtus2Q3UHD3 1353 aa21.59■■□□□ 1.05
Trim11-203ENSMUST00000108810 Il16O54824 1322 aa21.59■■□□□ 1.05
Trim11-203ENSMUST00000108810 Gm14025A2AP89 1413 aa21.58■■□□□ 1.05
Trim11-203ENSMUST00000108810 Caskin1Q6P9K8 1431 aa21.57■■□□□ 1.04
Trim11-203ENSMUST00000108810 Hspa5P20029 655 aaKnown RBP21.57■■□□□ 1.04
Trim11-203ENSMUST00000108810 Abcc1O35379 1528 aa21.56■■□□□ 1.04
Trim11-203ENSMUST00000108810 Adgrb2Q8CGM1 1561 aa21.55■■□□□ 1.04
Trim11-203ENSMUST00000108810 Lamc1P02468 1607 aaKnown RBP21.53■■□□□ 1.04
Trim11-203ENSMUST00000108810 Kif21bQ9QXL1 1668 aa21.53■■□□□ 1.04
Trim11-203ENSMUST00000108810 NhsB1AV60 1647 aa21.52■■□□□ 1.04
Trim11-203ENSMUST00000108810 Kiaa1210E9Q0C6 1637 aa21.52■■□□□ 1.04
Trim11-203ENSMUST00000108810 AlkP97793 1621 aa21.51■■□□□ 1.03
Trim11-203ENSMUST00000108810 Naip5Q9R016 1403 aa21.51■■□□□ 1.03
Trim11-203ENSMUST00000108810 Camsap2Q8C1B1 1461 aa21.5■■□□□ 1.03
Trim11-203ENSMUST00000108810 Tdrd9Q14BI7 1383 aa21.49■■□□□ 1.03
Trim11-203ENSMUST00000108810 Mphosph9A6H5Y1 991 aa21.49■■□□□ 1.03
Trim11-203ENSMUST00000108810 Rnf17Q99MV7 1640 aa21.48■■□□□ 1.03
Trim11-203ENSMUST00000108810 NclP09405 707 aaKnown RBP21.47■■□□□ 1.03
Trim11-203ENSMUST00000108810 Gm32742A0A1B0GT42 1604 aa21.47■■□□□ 1.03
Trim11-203ENSMUST00000108810 Fkbp15Q6P9Q6 1216 aaKnown RBP21.46■■□□□ 1.03
Trim11-203ENSMUST00000108810 Ube2uB1AUC4 352 aa21.46■■□□□ 1.03
Trim11-203ENSMUST00000108810 Zfp644E9QA22 1323 aa21.46■■□□□ 1.03
Trim11-203ENSMUST00000108810 Cdk11bP24788 784 aaKnown RBP21.45■■□□□ 1.02
Trim11-203ENSMUST00000108810 Wdr7Q920I9 1489 aa21.45■■□□□ 1.02
Trim11-203ENSMUST00000108810 Fmn2Q9JL04 1578 aa21.44■■□□□ 1.02
Trim11-203ENSMUST00000108810 Ppargc1bQ8VHJ7 1014 aa21.44■■□□□ 1.02
Trim11-203ENSMUST00000108810 Pdcd11Q6NS46 1862 aaKnown RBP21.43■■□□□ 1.02
Trim11-203ENSMUST00000108810 Trpm2Q91YD4 1506 aa21.41■■□□□ 1.02
Trim11-203ENSMUST00000108810 Abca8bQ8K440 1620 aa21.39■■□□□ 1.02
Trim11-203ENSMUST00000108810 Rprd2Q6NXI6 1469 aaKnown RBP21.38■■□□□ 1.01
Trim11-203ENSMUST00000108810 Supt6hQ62383 1726 aaKnown RBP21.38■■□□□ 1.01
Trim11-203ENSMUST00000108810 Arhgap5P97393 1501 aa21.37■■□□□ 1.01
Trim11-203ENSMUST00000108810 Mast1Q9R1L5 1570 aa21.35■■□□□ 1.01
Trim11-203ENSMUST00000108810 Cfap74Q3UY96 1578 aa21.35■■□□□ 1.01
Trim11-203ENSMUST00000108810 Adgrl2Q8JZZ7 1487 aa21.35■■□□□ 1.01
Trim11-203ENSMUST00000108810 Neurl4Q5NCX5 1563 aa21.33■■□□□ 1.01
Trim11-203ENSMUST00000108810 Pik3c2gO70167 1506 aa21.32■■□□□ 1
Trim11-203ENSMUST00000108810 Pkd2O35245 966 aa21.32■■□□□ 1
Trim11-203ENSMUST00000108810 Hecw1Q8K4P8 1604 aa21.32■■□□□ 1
Trim11-203ENSMUST00000108810 Trappc8E9PWG2 1437 aa21.31■■□□□ 1
Trim11-203ENSMUST00000108810 Pprc1Q6NZN1 1644 aa21.31■■□□□ 1
Trim11-203ENSMUST00000108810 Abcc3B2RX12 1523 aa21.3■■□□□ 1
Trim11-203ENSMUST00000108810 Usp47Q8BY87 1376 aa21.3■■□□□ 1
Trim11-203ENSMUST00000108810 Atp10dQ8K2X1 1416 aa21.3■■□□□ 1
Trim11-203ENSMUST00000108810 Gm13697A2AK42 830 aa21.29■■□□□ 1
Trim11-203ENSMUST00000108810 Lrrc9Q8CDN9 1456 aa21.27■■□□□ 1
Trim11-203ENSMUST00000108810 Ythdc2B2RR83 1445 aaKnown RBP21.26■□□□□ 0.99
Trim11-203ENSMUST00000108810 Znf608Q56A10 1511 aa21.26■□□□□ 0.99
Trim11-203ENSMUST00000108810 Ttll5Q8CHB8 1328 aa21.26■□□□□ 0.99
Trim11-203ENSMUST00000108810 Neurod1Q60867 357 aa21.25■□□□□ 0.99
Trim11-203ENSMUST00000108810 Cdc42bpbQ7TT50 1713 aa21.24■□□□□ 0.99
Trim11-203ENSMUST00000108810 PtprtQ99M80 1454 aa21.24■□□□□ 0.99
Trim11-203ENSMUST00000108810 Kif14L0N7N1 1674 aaKnown RBP21.23■□□□□ 0.99
Trim11-203ENSMUST00000108810 Ssh2Q5SW75 1423 aa21.23■□□□□ 0.99
Trim11-203ENSMUST00000108810 Igf1rQ60751 1373 aa21.22■□□□□ 0.99
Trim11-203ENSMUST00000108810 Nup155Q99P88 1391 aaKnown RBP21.21■□□□□ 0.99
Trim11-203ENSMUST00000108810 Dhx9O70133 1380 aaKnown RBP21.2■□□□□ 0.99
Trim11-203ENSMUST00000108810 Kidins220E9Q9B7 1793 aa21.2■□□□□ 0.98
Trim11-203ENSMUST00000108810 Asxl1P59598 1514 aa21.19■□□□□ 0.98
Trim11-203ENSMUST00000108810 Gapvd1Q6PAR5 1458 aa21.18■□□□□ 0.98
Trim11-203ENSMUST00000108810 Nop58Q6DFW4 536 aaKnown RBP21.18■□□□□ 0.98
Trim11-203ENSMUST00000108810 Sart1Q9Z315 806 aaKnown RBP21.17■□□□□ 0.98
Trim11-203ENSMUST00000108810 DroshaQ5HZJ0 1373 aaKnown RBP21.15■□□□□ 0.98
Trim11-203ENSMUST00000108810 PtprgQ05909 1442 aa21.15■□□□□ 0.98
Trim11-203ENSMUST00000108810 Mbd5B1AYB6 1498 aa21.14■□□□□ 0.97
Trim11-203ENSMUST00000108810 Trak1Q6PD31 939 aa21.14■□□□□ 0.97
Trim11-203ENSMUST00000108810 Zfyve16Q80U44 1528 aa21.13■□□□□ 0.97
Trim11-203ENSMUST00000108810 AI481877A2ALV5 1481 aa21.13■□□□□ 0.97
Trim11-203ENSMUST00000108810 Map4P27546 1125 aaKnown RBP21.11■□□□□ 0.97
Trim11-203ENSMUST00000108810 Rrp7aQ9D1C9 280 aaKnown RBP21.1■□□□□ 0.97
Trim11-203ENSMUST00000108810 Abca9Q8K449 1623 aa21.1■□□□□ 0.97
Trim11-203ENSMUST00000108810 Dot1lQ6XZL8 1540 aa21.1■□□□□ 0.97
Trim11-203ENSMUST00000108810 Cep170Q6A065 1588 aa21.09■□□□□ 0.97
Trim11-203ENSMUST00000108810 Abca17E9PX95 1733 aa21.09■□□□□ 0.97
Trim11-203ENSMUST00000108810 Sin3aQ60520 1274 aaKnown RBP21.07■□□□□ 0.96
Trim11-203ENSMUST00000108810 Robo2Q7TPD3 1470 aa21.07■□□□□ 0.96
Trim11-203ENSMUST00000108810 Pelp1Q9DBD5 1123 aaKnown RBP21.06■□□□□ 0.96
Trim11-203ENSMUST00000108810 Xrn1P97789 1719 aaKnown RBP21.06■□□□□ 0.96
Trim11-203ENSMUST00000108810 Prdm16A2A935 1275 aa21.05■□□□□ 0.96
Trim11-203ENSMUST00000108810 Mapk8ip2Q9ERE9 830 aa21.03■□□□□ 0.96
Trim11-203ENSMUST00000108810 Ncoa1P70365 1447 aa21.02■□□□□ 0.96
Trim11-203ENSMUST00000108810 Mug2P28666 1451 aa21.02■□□□□ 0.96
Trim11-203ENSMUST00000108810 Clstn2Q9ER65 966 aa21.01■□□□□ 0.95
Trim11-203ENSMUST00000108810 ShprhQ7TPQ3 1674 aa21.01■□□□□ 0.95
Trim11-203ENSMUST00000108810 Usp54Q8BL06 1588 aaKnown RBP21■□□□□ 0.95
Trim11-203ENSMUST00000108810 Iqgap1Q9JKF1 1657 aaKnown RBP21■□□□□ 0.95
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms