RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Mlh3A0A1Y7VMP7 1443 aa19.82■□□□□ 0.76
Ccdc28b-202ENSMUST00000106035 Prex2Q3LAC4 1598 aa19.79■□□□□ 0.76
Ccdc28b-202ENSMUST00000106035 Mug1P28665 1476 aa19.77■□□□□ 0.76
Ccdc28b-202ENSMUST00000106035 Synj2Q9D2G5 1434 aa19.76■□□□□ 0.75
Ccdc28b-202ENSMUST00000106035 Fam208aQ69ZR9 1610 aaKnown RBP19.76■□□□□ 0.75
Ccdc28b-202ENSMUST00000106035 Naip2Q9QUK4 1447 aa19.75■□□□□ 0.75
Ccdc28b-202ENSMUST00000106035 Kiaa1551Q5DTW7 1521 aa19.74■□□□□ 0.75
Ccdc28b-202ENSMUST00000106035 Ncapd3Q6ZQK0 1506 aa19.74■□□□□ 0.75
Ccdc28b-202ENSMUST00000106035 Pcf11G3X9Z4 1553 aa19.73■□□□□ 0.75
Ccdc28b-202ENSMUST00000106035 Abca9Q8K449 1623 aa19.73■□□□□ 0.75
Ccdc28b-202ENSMUST00000106035 MlecQ6ZQI3 291 aaKnown RBP19.72■□□□□ 0.75
Ccdc28b-202ENSMUST00000106035 Kiaa0556Q8C753 1610 aa19.72■□□□□ 0.75
Ccdc28b-202ENSMUST00000106035 CntlnA2AM05 1397 aa19.71■□□□□ 0.75
Ccdc28b-202ENSMUST00000106035 Kdm6bQ5NCY0 1641 aa19.7■□□□□ 0.74
Ccdc28b-202ENSMUST00000106035 Ap3b1Q9Z1T1 1105 aa19.69■□□□□ 0.74
Ccdc28b-202ENSMUST00000106035 Hecw2Q6I6G8 1578 aa19.68■□□□□ 0.74
Ccdc28b-202ENSMUST00000106035 Cdc42bpaQ3UU96 1719 aa19.65■□□□□ 0.74
Ccdc28b-202ENSMUST00000106035 Lemd3Q9WU40 921 aa19.61■□□□□ 0.73
Ccdc28b-202ENSMUST00000106035 Brwd3A2AHJ4 1799 aa19.6■□□□□ 0.73
Ccdc28b-202ENSMUST00000106035 Gm1043A0A140LJC2 1431 aa19.59■□□□□ 0.73
Ccdc28b-202ENSMUST00000106035 Cyb5rlB1AS42 316 aa19.58■□□□□ 0.72
Ccdc28b-202ENSMUST00000106035 OvosQ3UU35 1456 aa19.58■□□□□ 0.72
Ccdc28b-202ENSMUST00000106035 Kif14L0N7N1 1674 aaKnown RBP19.58■□□□□ 0.72
Ccdc28b-202ENSMUST00000106035 Arhgap5P97393 1501 aa19.57■□□□□ 0.72
Ccdc28b-202ENSMUST00000106035 Atp10aO54827 1508 aa19.53■□□□□ 0.72
Ccdc28b-202ENSMUST00000106035 Adamtsl3G3UXC7 1706 aa19.53■□□□□ 0.72
Ccdc28b-202ENSMUST00000106035 Peg3Q3URU2 1571 aa19.52■□□□□ 0.71
Ccdc28b-202ENSMUST00000106035 Qser1A2BIE1 1698 aa19.52■□□□□ 0.71
Ccdc28b-202ENSMUST00000106035 Kdm5cP41230 1554 aa19.51■□□□□ 0.71
Ccdc28b-202ENSMUST00000106035 Kidins220E9Q9B7 1793 aa19.51■□□□□ 0.71
Ccdc28b-202ENSMUST00000106035 NpatQ8BMA5 1420 aa19.51■□□□□ 0.71
Ccdc28b-202ENSMUST00000106035 Lmod2Q3UHZ5 550 aa19.5■□□□□ 0.71
Ccdc28b-202ENSMUST00000106035 Zmym4A2A791 1549 aaKnown RBP19.5■□□□□ 0.71
Ccdc28b-202ENSMUST00000106035 Yeats2Q3TUF7 1407 aa19.5■□□□□ 0.71
Ccdc28b-202ENSMUST00000106035 Naip1Q9QWK5 1403 aa19.5■□□□□ 0.71
Ccdc28b-202ENSMUST00000106035 Pdcd11Q6NS46 1862 aaKnown RBP19.5■□□□□ 0.71
Ccdc28b-202ENSMUST00000106035 Abcc3B2RX12 1523 aa19.49■□□□□ 0.71
Ccdc28b-202ENSMUST00000106035 NexmifQ5DTT1 1515 aa19.49■□□□□ 0.71
Ccdc28b-202ENSMUST00000106035 Ptch1Q61115 1434 aa19.49■□□□□ 0.71
Ccdc28b-202ENSMUST00000106035 Cfap74Q3UY96 1578 aa19.46■□□□□ 0.71
Ccdc28b-202ENSMUST00000106035 Trappc8E9PWG2 1437 aa19.46■□□□□ 0.71
Ccdc28b-202ENSMUST00000106035 Caskin1Q6P9K8 1431 aa19.45■□□□□ 0.7
Ccdc28b-202ENSMUST00000106035 Tdrd9Q14BI7 1383 aa19.44■□□□□ 0.7
Ccdc28b-202ENSMUST00000106035 Dip2cE9PWR4 1557 aa19.44■□□□□ 0.7
Ccdc28b-202ENSMUST00000106035 Neurl4Q5NCX5 1563 aa19.44■□□□□ 0.7
Ccdc28b-202ENSMUST00000106035 Tiam1Q60610 1591 aa19.44■□□□□ 0.7
Ccdc28b-202ENSMUST00000106035 PtprmP28828 1452 aa19.43■□□□□ 0.7
Ccdc28b-202ENSMUST00000106035 Ercc6l2Q9JIM3 1537 aa19.43■□□□□ 0.7
Ccdc28b-202ENSMUST00000106035 RereQ80TZ9 1558 aa19.43■□□□□ 0.7
Ccdc28b-202ENSMUST00000106035 Cul9Q80TT8 1865 aa19.43■□□□□ 0.7
Ccdc28b-202ENSMUST00000106035 Gm32742A0A1B0GT42 1604 aa19.43■□□□□ 0.7
Ccdc28b-202ENSMUST00000106035 Camsap2Q8C1B1 1461 aa19.41■□□□□ 0.7
Ccdc28b-202ENSMUST00000106035 Lmtk2Q3TYD6 1471 aa19.38■□□□□ 0.69
Ccdc28b-202ENSMUST00000106035 Sart1Q9Z315 806 aaKnown RBP19.37■□□□□ 0.69
Ccdc28b-202ENSMUST00000106035 Cdk11bP24788 784 aaKnown RBP19.36■□□□□ 0.69
Ccdc28b-202ENSMUST00000106035 Safb2Q80YR5 991 aaKnown RBP19.36■□□□□ 0.69
Ccdc28b-202ENSMUST00000106035 Adcy10Q8C0T9 1614 aa19.36■□□□□ 0.69
Ccdc28b-202ENSMUST00000106035 Ccnb3Q810T2 1396 aa19.33■□□□□ 0.69
Ccdc28b-202ENSMUST00000106035 MyclP10166 368 aa19.32■□□□□ 0.68
Ccdc28b-202ENSMUST00000106035 Talpid3E9PV87 1520 aa19.3■□□□□ 0.68
Ccdc28b-202ENSMUST00000106035 Arhgef40Q3UPH7 1517 aa19.3■□□□□ 0.68
Ccdc28b-202ENSMUST00000106035 Hecw1Q8K4P8 1604 aa19.29■□□□□ 0.68
Ccdc28b-202ENSMUST00000106035 Dennd4bQ3U1Y4 1499 aa19.28■□□□□ 0.68
Ccdc28b-202ENSMUST00000106035 Ahdc1Q6PAL7 1594 aaKnown RBP19.27■□□□□ 0.68
Ccdc28b-202ENSMUST00000106035 Cdc42bpbQ7TT50 1713 aa19.26■□□□□ 0.67
Ccdc28b-202ENSMUST00000106035 Cdc42bpgQ80UW5 1551 aa19.24■□□□□ 0.67
Ccdc28b-202ENSMUST00000106035 Cfap65Q3V0B4 1847 aa19.24■□□□□ 0.67
Ccdc28b-202ENSMUST00000106035 Nos1Q9Z0J4 1429 aa19.24■□□□□ 0.67
Ccdc28b-202ENSMUST00000106035 Myom2Q14BI5 1463 aa19.23■□□□□ 0.67
Ccdc28b-202ENSMUST00000106035 Supt6hQ62383 1726 aaKnown RBP19.22■□□□□ 0.67
Ccdc28b-202ENSMUST00000106035 SphkapQ6NSW3 1687 aa19.2■□□□□ 0.66
Ccdc28b-202ENSMUST00000106035 Fhod3Q76LL6 1578 aa19.2■□□□□ 0.66
Ccdc28b-202ENSMUST00000106035 Afap1Q80YS6 731 aa19.2■□□□□ 0.66
Ccdc28b-202ENSMUST00000106035 Trpm1Q2TV84 1622 aa19.2■□□□□ 0.66
Ccdc28b-202ENSMUST00000106035 Prdm16A2A935 1275 aa19.19■□□□□ 0.66
Ccdc28b-202ENSMUST00000106035 Map3k5O35099 1380 aa19.19■□□□□ 0.66
Ccdc28b-202ENSMUST00000106035 Abca6Q8K441 1624 aa19.18■□□□□ 0.66
Ccdc28b-202ENSMUST00000106035 Naip6Q9JIB6 1403 aa19.17■□□□□ 0.66
Ccdc28b-202ENSMUST00000106035 Rsph4aQ8BYM7 716 aa19.14■□□□□ 0.65
Ccdc28b-202ENSMUST00000106035 Gli2Q0VGT2 1544 aa19.12■□□□□ 0.65
Ccdc28b-202ENSMUST00000106035 Trpm2Q91YD4 1506 aa19.11■□□□□ 0.65
Ccdc28b-202ENSMUST00000106035 Znf518aB2RRF6 1478 aaKnown RBP19.11■□□□□ 0.65
Ccdc28b-202ENSMUST00000106035 4930407I10RikD3Z5T8 1512 aa19.1■□□□□ 0.65
Ccdc28b-202ENSMUST00000106035 Mast1Q9R1L5 1570 aa19.1■□□□□ 0.65
Ccdc28b-202ENSMUST00000106035 Bcl9Q9D219 1425 aa19.09■□□□□ 0.65
Ccdc28b-202ENSMUST00000106035 Rrp7aQ9D1C9 280 aaKnown RBP19.09■□□□□ 0.65
Ccdc28b-202ENSMUST00000106035 Dip2bQ3UH60 1574 aa19.09■□□□□ 0.65
Ccdc28b-202ENSMUST00000106035 Abcc5Q9R1X5 1436 aa19.08■□□□□ 0.64
Ccdc28b-202ENSMUST00000106035 Fmn2Q9JL04 1578 aa19.06■□□□□ 0.64
Ccdc28b-202ENSMUST00000106035 Mtus2Q3UHD3 1353 aa19.06■□□□□ 0.64
Ccdc28b-202ENSMUST00000106035 Uggt2E9Q4X2 1504 aa19.05■□□□□ 0.64
Ccdc28b-202ENSMUST00000106035 Knl1Q66JQ7 1612 aa19.04■□□□□ 0.64
Ccdc28b-202ENSMUST00000106035 Dip2aQ8BWT5 1523 aa19.04■□□□□ 0.64
Ccdc28b-202ENSMUST00000106035 Kif3bQ61771 747 aa19.03■□□□□ 0.64
Ccdc28b-202ENSMUST00000106035 Fbxo41Q6NS60 873 aa19.03■□□□□ 0.64
Ccdc28b-202ENSMUST00000106035 Xrn1P97789 1719 aaKnown RBP19.03■□□□□ 0.64
Ccdc28b-202ENSMUST00000106035 Plch2A2AP18 1501 aa19.02■□□□□ 0.64
Ccdc28b-202ENSMUST00000106035 Topbp1Q6ZQF0 1515 aa19.01■□□□□ 0.63
Ccdc28b-202ENSMUST00000106035 RictorQ6QI06 1708 aa19.01■□□□□ 0.63
Ccdc28b-202ENSMUST00000106035 Plekhh2Q8C115 1491 aa19.01■□□□□ 0.63
Retrieved 100 of 22,080 RNA–protein pairs in 46.3 ms