RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Pla2r1Q62028 1487 aa15.82■□□□□ 0.12
Col9a1-202ENSMUST00000088349 Washc2Q6PGL7 1334 aa15.82■□□□□ 0.12
Col9a1-202ENSMUST00000088349 Peg3Q3URU2 1571 aa15.82■□□□□ 0.12
Col9a1-202ENSMUST00000088349 Slc4a3P16283 1227 aa15.81■□□□□ 0.12
Col9a1-202ENSMUST00000088349 Rtl5Q5DTT4 599 aa15.81■□□□□ 0.12
Col9a1-202ENSMUST00000088349 Camsap2Q8C1B1 1461 aa15.8■□□□□ 0.12
Col9a1-202ENSMUST00000088349 Usp47Q8BY87 1376 aa15.8■□□□□ 0.12
Col9a1-202ENSMUST00000088349 Pak3Q61036 559 aa15.79■□□□□ 0.12
Col9a1-202ENSMUST00000088349 NexmifQ5DTT1 1515 aa15.78■□□□□ 0.12
Col9a1-202ENSMUST00000088349 Grwd1Q810D6 446 aaKnown RBP15.78■□□□□ 0.12
Col9a1-202ENSMUST00000088349 BC005561E9Q5E2 1589 aa15.78■□□□□ 0.12
Col9a1-202ENSMUST00000088349 Grin2aP35436 1464 aa15.77■□□□□ 0.12
Col9a1-202ENSMUST00000088349 Disp1Q3TDN0 1521 aa15.77■□□□□ 0.12
Col9a1-202ENSMUST00000088349 PxdnQ3UQ28 1475 aa15.77■□□□□ 0.11
Col9a1-202ENSMUST00000088349 Gm13695A2AK44 830 aa15.76■□□□□ 0.11
Col9a1-202ENSMUST00000088349 Ttbk1Q6PCN3 1308 aa15.76■□□□□ 0.11
Col9a1-202ENSMUST00000088349 WizO88286 1684 aaKnown RBP15.75■□□□□ 0.11
Col9a1-202ENSMUST00000088349 Polr1aO35134 1717 aaKnown RBP15.74■□□□□ 0.11
Col9a1-202ENSMUST00000088349 Magi3Q9EQJ9 1476 aa15.74■□□□□ 0.11
Col9a1-202ENSMUST00000088349 Ncoa1P70365 1447 aa15.72■□□□□ 0.11
Col9a1-202ENSMUST00000088349 Trak1Q6PD31 939 aa15.72■□□□□ 0.11
Col9a1-202ENSMUST00000088349 Ofd1Q80Z25 1017 aa15.71■□□□□ 0.1
Col9a1-202ENSMUST00000088349 Ncoa3O09000 1398 aa15.71■□□□□ 0.1
Col9a1-202ENSMUST00000088349 Mtus2Q3UHD3 1353 aa15.7■□□□□ 0.1
Col9a1-202ENSMUST00000088349 Kcnh8P59111 1102 aa15.68■□□□□ 0.1
Col9a1-202ENSMUST00000088349 Abcc5Q9R1X5 1436 aa15.68■□□□□ 0.1
Col9a1-202ENSMUST00000088349 Liat1Q810M6 228 aa15.68■□□□□ 0.1
Col9a1-202ENSMUST00000088349 Lmtk2Q3TYD6 1471 aa15.68■□□□□ 0.1
Col9a1-202ENSMUST00000088349 Lrriq1Q0P5X1 1673 aa15.67■□□□□ 0.1
Col9a1-202ENSMUST00000088349 Cul7Q8VE73 1689 aa15.67■□□□□ 0.1
Col9a1-202ENSMUST00000088349 PnisrA2AJT4 805 aaKnown RBP15.67■□□□□ 0.1
Col9a1-202ENSMUST00000088349 Pprc1Q6NZN1 1644 aa15.67■□□□□ 0.1
Col9a1-202ENSMUST00000088349 Dhx9O70133 1380 aaKnown RBP15.67■□□□□ 0.1
Col9a1-202ENSMUST00000088349 Ift140E9PY46 1464 aa15.67■□□□□ 0.1
Col9a1-202ENSMUST00000088349 Mug1P28665 1476 aa15.66■□□□□ 0.1
Col9a1-202ENSMUST00000088349 Arhgef40Q3UPH7 1517 aa15.66■□□□□ 0.1
Col9a1-202ENSMUST00000088349 Plekhh2Q8C115 1491 aa15.64■□□□□ 0.1
Col9a1-202ENSMUST00000088349 Rundc1Q0VDN7 615 aa15.64■□□□□ 0.09
Col9a1-202ENSMUST00000088349 Tdrd9Q14BI7 1383 aa15.63■□□□□ 0.09
Col9a1-202ENSMUST00000088349 Rprd2Q6NXI6 1469 aaKnown RBP15.63■□□□□ 0.09
Col9a1-202ENSMUST00000088349 AknaQ80VW7 1404 aa15.62■□□□□ 0.09
Col9a1-202ENSMUST00000088349 Cc2d2bA0A286YDU8 1405 aa15.6■□□□□ 0.09
Col9a1-202ENSMUST00000088349 Ttll5Q8CHB8 1328 aa15.6■□□□□ 0.09
Col9a1-202ENSMUST00000088349 Card11Q8CIS0 1159 aa15.6■□□□□ 0.09
Col9a1-202ENSMUST00000088349 Abca5Q8K448 1642 aa15.59■□□□□ 0.09
Col9a1-202ENSMUST00000088349 Arhgap31A6X8Z5 1425 aa15.59■□□□□ 0.09
Col9a1-202ENSMUST00000088349 PrkcshO08795 521 aa15.59■□□□□ 0.09
Col9a1-202ENSMUST00000088349 Soga1E1U8D0 1418 aa15.59■□□□□ 0.09
Col9a1-202ENSMUST00000088349 Kdm6bQ5NCY0 1641 aa15.59■□□□□ 0.09
Col9a1-202ENSMUST00000088349 L3mbtl2P59178 703 aa15.59■□□□□ 0.09
Col9a1-202ENSMUST00000088349 Egfem1Q8C088 590 aa15.58■□□□□ 0.08
Col9a1-202ENSMUST00000088349 Dapk1Q80YE7 1442 aa15.58■□□□□ 0.08
Col9a1-202ENSMUST00000088349 Fhod3Q76LL6 1578 aa15.57■□□□□ 0.08
Col9a1-202ENSMUST00000088349 Rrp7aQ9D1C9 280 aaKnown RBP15.57■□□□□ 0.08
Col9a1-202ENSMUST00000088349 Adgrb2Q8CGM1 1561 aa15.57■□□□□ 0.08
Col9a1-202ENSMUST00000088349 Cwc22Q8C5N3 908 aaKnown RBP15.57■□□□□ 0.08
Col9a1-202ENSMUST00000088349 Setd1bQ8CFT2 1985 aa15.56■□□□□ 0.08
Col9a1-202ENSMUST00000088349 Rfx7F8VPJ6 1459 aa15.56■□□□□ 0.08
Col9a1-202ENSMUST00000088349 Nup160Q9Z0W3 1402 aaKnown RBP15.55■□□□□ 0.08
Col9a1-202ENSMUST00000088349 Map4P27546 1125 aaKnown RBP15.54■□□□□ 0.08
Col9a1-202ENSMUST00000088349 Erich6D3Z6S9 713 aa15.54■□□□□ 0.08
Col9a1-202ENSMUST00000088349 Rad21Q61550 635 aaKnown RBP15.53■□□□□ 0.08
Col9a1-202ENSMUST00000088349 Setbp1Q9Z180 1582 aa15.53■□□□□ 0.08
Col9a1-202ENSMUST00000088349 Gcc2Q8CHG3 1679 aa15.51■□□□□ 0.07
Col9a1-202ENSMUST00000088349 Adamts12Q811B3 1600 aa15.51■□□□□ 0.07
Col9a1-202ENSMUST00000088349 Prdm10Q3UTQ7 1184 aa15.51■□□□□ 0.07
Col9a1-202ENSMUST00000088349 Pik3c2gO70167 1506 aa15.51■□□□□ 0.07
Col9a1-202ENSMUST00000088349 Plekhg5Q66T02 1073 aa15.5■□□□□ 0.07
Col9a1-202ENSMUST00000088349 Tcerg1Q8CGF7 1100 aaKnown RBP15.49■□□□□ 0.07
Col9a1-202ENSMUST00000088349 SphkapQ6NSW3 1687 aa15.49■□□□□ 0.07
Col9a1-202ENSMUST00000088349 Nup155Q99P88 1391 aaKnown RBP15.49■□□□□ 0.07
Col9a1-202ENSMUST00000088349 Dhx57Q6P5D3 1388 aaKnown RBP15.48■□□□□ 0.07
Col9a1-202ENSMUST00000088349 Abca16E9PWJ7 1678 aa15.48■□□□□ 0.07
Col9a1-202ENSMUST00000088349 Ccdc27Q3V036 639 aa15.47■□□□□ 0.07
Col9a1-202ENSMUST00000088349 Shroom2A2ALU4 1481 aa15.47■□□□□ 0.07
Col9a1-202ENSMUST00000088349 Adcy10Q8C0T9 1614 aa15.46■□□□□ 0.07
Col9a1-202ENSMUST00000088349 Rpgrip1lQ8CG73 1264 aa15.46■□□□□ 0.07
Col9a1-202ENSMUST00000088349 Neo1P97798 1493 aa15.45■□□□□ 0.06
Col9a1-202ENSMUST00000088349 Ipo9Q91YE6 1041 aa15.45■□□□□ 0.06
Col9a1-202ENSMUST00000088349 Rapgef6Q5NCJ1 1609 aa15.45■□□□□ 0.06
Col9a1-202ENSMUST00000088349 NeflP08551 543 aa15.45■□□□□ 0.06
Col9a1-202ENSMUST00000088349 Jph4Q80WT0 628 aa15.45■□□□□ 0.06
Col9a1-202ENSMUST00000088349 Prex2Q3LAC4 1598 aa15.44■□□□□ 0.06
Col9a1-202ENSMUST00000088349 Mug2P28666 1451 aa15.43■□□□□ 0.06
Col9a1-202ENSMUST00000088349 Sart1Q9Z315 806 aaKnown RBP15.42■□□□□ 0.06
Col9a1-202ENSMUST00000088349 AlkP97793 1621 aa15.42■□□□□ 0.06
Col9a1-202ENSMUST00000088349 Il16O54824 1322 aa15.42■□□□□ 0.06
Col9a1-202ENSMUST00000088349 Q7TT23 1179 aa15.42■□□□□ 0.06
Col9a1-202ENSMUST00000088349 Anp32bQ9EST5 272 aaKnown RBP15.42■□□□□ 0.06
Col9a1-202ENSMUST00000088349 Myom3A2ABU4 1439 aa15.41■□□□□ 0.06
Col9a1-202ENSMUST00000088349 Erbb3Q61526 1339 aa15.41■□□□□ 0.06
Col9a1-202ENSMUST00000088349 ChgaP26339 463 aaKnown RBP15.41■□□□□ 0.06
Col9a1-202ENSMUST00000088349 Kdm2aP59997 1161 aa15.41■□□□□ 0.06
Col9a1-202ENSMUST00000088349 Magi1Q6RHR9 1471 aa15.4■□□□□ 0.06
Col9a1-202ENSMUST00000088349 Kdm3bQ6ZPY7 1562 aa15.4■□□□□ 0.06
Col9a1-202ENSMUST00000088349 Kif14L0N7N1 1674 aaKnown RBP15.4■□□□□ 0.06
Col9a1-202ENSMUST00000088349 Upf2A2AT37 1269 aaKnown RBP15.4■□□□□ 0.06
Col9a1-202ENSMUST00000088349 Ifit1bl1D3Z6F0 470 aa15.4■□□□□ 0.06
Col9a1-202ENSMUST00000088349 Zfp444Q3TDV8 331 aaKnown RBP15.4■□□□□ 0.06
Col9a1-202ENSMUST00000088349 Abcc2Q8VI47 1543 aa15.39■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms