RNA–Protein interactions for RNA: ENSMUST00000074002.11

Ube3b-201, Transcript of Ubiquitin-protein ligase E3B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ube3b, Length 5,194 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3b-201ENSMUST00000074002 Pknox2Q8BG99 474 aa18.31■□□□□ 0.52
Ube3b-201ENSMUST00000074002 Nolc1E9Q5C9 702 aaKnown RBP18.3■□□□□ 0.52
Ube3b-201ENSMUST00000074002 Ncoa2Q61026 1462 aa18.29■□□□□ 0.52
Ube3b-201ENSMUST00000074002 Gtf3c3Q3TMP1 882 aa18.29■□□□□ 0.52
Ube3b-201ENSMUST00000074002 Trak1Q6PD31 939 aa18.29■□□□□ 0.52
Ube3b-201ENSMUST00000074002 Card11Q8CIS0 1159 aa18.28■□□□□ 0.52
Ube3b-201ENSMUST00000074002 Ankrd26Q811D2 1581 aa18.28■□□□□ 0.52
Ube3b-201ENSMUST00000074002 Cc2d2bA0A286YDU8 1405 aa18.28■□□□□ 0.52
Ube3b-201ENSMUST00000074002 Arid3cA6PWV5 409 aa18.26■□□□□ 0.51
Ube3b-201ENSMUST00000074002 P3h3Q8CG70 732 aa18.26■□□□□ 0.51
Ube3b-201ENSMUST00000074002 Grin2aP35436 1464 aa18.26■□□□□ 0.51
Ube3b-201ENSMUST00000074002 ArxO35085 564 aa18.25■□□□□ 0.51
Ube3b-201ENSMUST00000074002 Cwc22Q8C5N3 908 aaKnown RBP18.25■□□□□ 0.51
Ube3b-201ENSMUST00000074002 Mroh3A0A1D5RM54 893 aa18.25■□□□□ 0.51
Ube3b-201ENSMUST00000074002 Vps8Q0P5W1 1427 aa18.25■□□□□ 0.51
Ube3b-201ENSMUST00000074002 Prdm10Q3UTQ7 1184 aa18.22■□□□□ 0.51
Ube3b-201ENSMUST00000074002 Nup155Q99P88 1391 aaKnown RBP18.22■□□□□ 0.51
Ube3b-201ENSMUST00000074002 Arhgap31A6X8Z5 1425 aa18.22■□□□□ 0.51
Ube3b-201ENSMUST00000074002 Soga1E1U8D0 1418 aa18.22■□□□□ 0.51
Ube3b-201ENSMUST00000074002 Tdrd9Q14BI7 1383 aa18.21■□□□□ 0.51
Ube3b-201ENSMUST00000074002 Sin3aQ60520 1274 aaKnown RBP18.21■□□□□ 0.51
Ube3b-201ENSMUST00000074002 Nlrp6Q91WS2 869 aa18.2■□□□□ 0.5
Ube3b-201ENSMUST00000074002 Sart1Q9Z315 806 aaKnown RBP18.2■□□□□ 0.5
Ube3b-201ENSMUST00000074002 Ankrd36D3Z4K0 1415 aa18.2■□□□□ 0.5
Ube3b-201ENSMUST00000074002 TchhA0A0B4J1F9 1599 aa18.19■□□□□ 0.5
Ube3b-201ENSMUST00000074002 Kdm2aP59997 1161 aa18.18■□□□□ 0.5
Ube3b-201ENSMUST00000074002 Samd9lQ69Z37 1561 aa18.16■□□□□ 0.5
Ube3b-201ENSMUST00000074002 Fgd6Q69ZL1 1399 aa18.16■□□□□ 0.5
Ube3b-201ENSMUST00000074002 Plppr3Q7TPB0 716 aa18.15■□□□□ 0.5
Ube3b-201ENSMUST00000074002 Lemd3Q9WU40 921 aa18.15■□□□□ 0.5
Ube3b-201ENSMUST00000074002 Slx4Q6P1D7 1565 aa18.14■□□□□ 0.49
Ube3b-201ENSMUST00000074002 Slc4a3P16283 1227 aa18.14■□□□□ 0.49
Ube3b-201ENSMUST00000074002 Gm13695A2AK44 830 aa18.14■□□□□ 0.49
Ube3b-201ENSMUST00000074002 Rundc1Q0VDN7 615 aa18.13■□□□□ 0.49
Ube3b-201ENSMUST00000074002 Plcd4Q8K3R3 807 aa18.13■□□□□ 0.49
Ube3b-201ENSMUST00000074002 Usp47Q8BY87 1376 aa18.13■□□□□ 0.49
Ube3b-201ENSMUST00000074002 Stk24Q99KH8 431 aa18.1■□□□□ 0.49
Ube3b-201ENSMUST00000074002 CanxP35564 591 aaKnown RBP18.09■□□□□ 0.49
Ube3b-201ENSMUST00000074002 Taok2Q6ZQ29 1240 aa18.09■□□□□ 0.49
Ube3b-201ENSMUST00000074002 Kif21aQ9QXL2 1672 aa18.09■□□□□ 0.49
Ube3b-201ENSMUST00000074002 Srpk2O54781 681 aaKnown RBP18.08■□□□□ 0.49
Ube3b-201ENSMUST00000074002 Fam163aQ8CAA5 168 aa18.08■□□□□ 0.49
Ube3b-201ENSMUST00000074002 Ccdc141E9Q8Q6 1531 aa18.08■□□□□ 0.49
Ube3b-201ENSMUST00000074002 Disp1Q3TDN0 1521 aa18.08■□□□□ 0.48
Ube3b-201ENSMUST00000074002 Pla2r1Q62028 1487 aa18.08■□□□□ 0.48
Ube3b-201ENSMUST00000074002 Gm20521D3Z5F7 333 aa18.08■□□□□ 0.48
Ube3b-201ENSMUST00000074002 NexmifQ5DTT1 1515 aa18.08■□□□□ 0.48
Ube3b-201ENSMUST00000074002 Eif4g1Q6NZJ6 1600 aaKnown RBP18.07■□□□□ 0.48
Ube3b-201ENSMUST00000074002 Gpatch8A2A6A1 1505 aa18.07■□□□□ 0.48
Ube3b-201ENSMUST00000074002 Mug1P28665 1476 aa18.07■□□□□ 0.48
Ube3b-201ENSMUST00000074002 Zfp644E9QA22 1323 aa18.06■□□□□ 0.48
Ube3b-201ENSMUST00000074002 Naip2Q9QUK4 1447 aa18.05■□□□□ 0.48
Ube3b-201ENSMUST00000074002 Unc13aQ4KUS2 1712 aa18.05■□□□□ 0.48
Ube3b-201ENSMUST00000074002 Ifit1bl1D3Z6F0 470 aa18.03■□□□□ 0.48
Ube3b-201ENSMUST00000074002 Kif3bQ61771 747 aa18.03■□□□□ 0.48
Ube3b-201ENSMUST00000074002 Pabpn1Q8CCS6 302 aaKnown RBP18.02■□□□□ 0.48
Ube3b-201ENSMUST00000074002 A2mQ6GQT1 1474 aa18.02■□□□□ 0.47
Ube3b-201ENSMUST00000074002 Gm1043A0A140LJC2 1431 aa18.01■□□□□ 0.47
Ube3b-201ENSMUST00000074002 Gm14025A2AP89 1413 aa18.01■□□□□ 0.47
Ube3b-201ENSMUST00000074002 Ppp1r18Q8BQ30 594 aa18.01■□□□□ 0.47
Ube3b-201ENSMUST00000074002 Spag9Q58A65 1321 aaKnown RBP17.99■□□□□ 0.47
Ube3b-201ENSMUST00000074002 Neo1P97798 1493 aa17.99■□□□□ 0.47
Ube3b-201ENSMUST00000074002 Erich3F6QRE9 1637 aa17.99■□□□□ 0.47
Ube3b-201ENSMUST00000074002 Wwc2Q6NXJ0 1187 aa17.99■□□□□ 0.47
Ube3b-201ENSMUST00000074002 Rad21Q61550 635 aaKnown RBP17.99■□□□□ 0.47
Ube3b-201ENSMUST00000074002 Safb2Q80YR5 991 aaKnown RBP17.97■□□□□ 0.47
Ube3b-201ENSMUST00000074002 Magi1Q6RHR9 1471 aa17.97■□□□□ 0.47
Ube3b-201ENSMUST00000074002 WizO88286 1684 aaKnown RBP17.97■□□□□ 0.47
Ube3b-201ENSMUST00000074002 Il16O54824 1322 aa17.96■□□□□ 0.47
Ube3b-201ENSMUST00000074002 IqubQ8CDK3 788 aa17.96■□□□□ 0.47
Ube3b-201ENSMUST00000074002 PxdnQ3UQ28 1475 aa17.96■□□□□ 0.47
Ube3b-201ENSMUST00000074002 3425401B19RikD3Z1D3 1412 aa17.96■□□□□ 0.46
Ube3b-201ENSMUST00000074002 Arhgap5P97393 1501 aa17.95■□□□□ 0.46
Ube3b-201ENSMUST00000074002 Abcc5Q9R1X5 1436 aa17.93■□□□□ 0.46
Ube3b-201ENSMUST00000074002 Magi3Q9EQJ9 1476 aa17.93■□□□□ 0.46
Ube3b-201ENSMUST00000074002 Ythdc1E9Q5K9 736 aaKnown RBP17.93■□□□□ 0.46
Ube3b-201ENSMUST00000074002 Ipo9Q91YE6 1041 aa17.93■□□□□ 0.46
Ube3b-201ENSMUST00000074002 Ofd1Q80Z25 1017 aa17.92■□□□□ 0.46
Ube3b-201ENSMUST00000074002 Lmod3E9QA62 571 aa17.9■□□□□ 0.46
Ube3b-201ENSMUST00000074002 Exoc6Q8R313 802 aa17.9■□□□□ 0.46
Ube3b-201ENSMUST00000074002 Prdm16A2A935 1275 aa17.89■□□□□ 0.45
Ube3b-201ENSMUST00000074002 BC005561E9Q5E2 1589 aa17.89■□□□□ 0.45
Ube3b-201ENSMUST00000074002 Ncoa3O09000 1398 aa17.89■□□□□ 0.45
Ube3b-201ENSMUST00000074002 Rtn4Q99P72 1162 aaKnown RBP17.88■□□□□ 0.45
Ube3b-201ENSMUST00000074002 Ttll5Q8CHB8 1328 aa17.88■□□□□ 0.45
Ube3b-201ENSMUST00000074002 Stag3O70576 1240 aa17.87■□□□□ 0.45
Ube3b-201ENSMUST00000074002 Dapk1Q80YE7 1442 aa17.86■□□□□ 0.45
Ube3b-201ENSMUST00000074002 Nup160Q9Z0W3 1402 aaKnown RBP17.86■□□□□ 0.45
Ube3b-201ENSMUST00000074002 Rock2P70336 1388 aa17.86■□□□□ 0.45
Ube3b-201ENSMUST00000074002 AU015836B2RUM3 263 aa17.85■□□□□ 0.45
Ube3b-201ENSMUST00000074002 Polr3glQ8R0C0 218 aa17.85■□□□□ 0.45
Ube3b-201ENSMUST00000074002 Rfx7F8VPJ6 1459 aa17.85■□□□□ 0.45
Ube3b-201ENSMUST00000074002 Peg3Q3URU2 1571 aa17.84■□□□□ 0.45
Ube3b-201ENSMUST00000074002 Gtf2e1Q9D0D5 440 aa17.84■□□□□ 0.45
Ube3b-201ENSMUST00000074002 Smg6P61406 1418 aaKnown RBP17.84■□□□□ 0.45
Ube3b-201ENSMUST00000074002 Spryd3E9Q9B3 442 aa17.84■□□□□ 0.45
Ube3b-201ENSMUST00000074002 Shroom2A2ALU4 1481 aa17.83■□□□□ 0.45
Ube3b-201ENSMUST00000074002 Pde4cQ3UEI1 686 aa17.83■□□□□ 0.44
Ube3b-201ENSMUST00000074002 Map3k5O35099 1380 aa17.83■□□□□ 0.44
Ube3b-201ENSMUST00000074002 Exosc9Q9JHI7 438 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 103.6 ms