RNA–Protein interactions for RNA: ENSMUST00000068378.5

Cntn1-202, Transcript of Contactin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cntn1, Length 3,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1-202ENSMUST00000068378 Gpatch11Q3UFS4 262 aa9.82□□□□□ -0.84
Cntn1-202ENSMUST00000068378 Aebp1Q640N1 1128 aa9.81□□□□□ -0.84
Cntn1-202ENSMUST00000068378 Anp32bQ9EST5 272 aaKnown RBP9.81□□□□□ -0.84
Cntn1-202ENSMUST00000068378 Wdr43Q6ZQL4 677 aaKnown RBP9.8□□□□□ -0.84
Cntn1-202ENSMUST00000068378 Iqcf3Q9D498 203 aa9.8□□□□□ -0.84
Cntn1-202ENSMUST00000068378 Sox12Q04890 314 aa9.78□□□□□ -0.84
Cntn1-202ENSMUST00000068378 TraipQ8VIG6 470 aa9.78□□□□□ -0.84
Cntn1-202ENSMUST00000068378 Rrp9Q91WM3 475 aaKnown RBP9.77□□□□□ -0.85
Cntn1-202ENSMUST00000068378 ChgaP26339 463 aaKnown RBP9.77□□□□□ -0.85
Cntn1-202ENSMUST00000068378 Cul9Q80TT8 1865 aa9.76□□□□□ -0.85
Cntn1-202ENSMUST00000068378 Zc3h15Q3TIV5 426 aaKnown RBP9.76□□□□□ -0.85
Cntn1-202ENSMUST00000068378 Dnajc5P60904 198 aa9.75□□□□□ -0.85
Cntn1-202ENSMUST00000068378 Stra8P70278 393 aa9.75□□□□□ -0.85
Cntn1-202ENSMUST00000068378 Fkbp15Q6P9Q6 1216 aaKnown RBP9.75□□□□□ -0.85
Cntn1-202ENSMUST00000068378 Ercc6F8VPZ5 1481 aa9.75□□□□□ -0.85
Cntn1-202ENSMUST00000068378 Smarca4Q3TKT4 1613 aaKnown RBP9.75□□□□□ -0.85
Cntn1-202ENSMUST00000068378 Ipo9Q91YE6 1041 aa9.74□□□□□ -0.85
Cntn1-202ENSMUST00000068378 Smarca2Q6DIC0 1577 aa9.73□□□□□ -0.85
Cntn1-202ENSMUST00000068378 Slc4a3P16283 1227 aa9.73□□□□□ -0.85
Cntn1-202ENSMUST00000068378 Noa1Q9JJG9 693 aaKnown RBP9.73□□□□□ -0.85
Cntn1-202ENSMUST00000068378 Dhx30Q99PU8 1217 aaKnown RBP9.72□□□□□ -0.85
Cntn1-202ENSMUST00000068378 Slc4a2P13808 1237 aaKnown RBP9.71□□□□□ -0.85
Cntn1-202ENSMUST00000068378 Myt1lP97500 1187 aa9.71□□□□□ -0.85
Cntn1-202ENSMUST00000068378 Cecr2E9Q2Z1 1453 aa9.7□□□□□ -0.86
Cntn1-202ENSMUST00000068378 Fam43aQ8BUP8 424 aa9.7□□□□□ -0.86
Cntn1-202ENSMUST00000068378 Mfap1aC0HKD8 439 aaKnown RBP9.7□□□□□ -0.86
Cntn1-202ENSMUST00000068378 Mfap1bC0HKD9 439 aaKnown RBP9.7□□□□□ -0.86
Cntn1-202ENSMUST00000068378 TonslQ6NZL6 1363 aa9.7□□□□□ -0.86
Cntn1-202ENSMUST00000068378 Iqgap2Q3UQ44 1575 aa9.7□□□□□ -0.86
Cntn1-202ENSMUST00000068378 Baz1bQ9Z277 1479 aa9.69□□□□□ -0.86
Cntn1-202ENSMUST00000068378 Cc2d2aQ8CFW7 1633 aa9.69□□□□□ -0.86
Cntn1-202ENSMUST00000068378 Neurod2Q62414 383 aa9.68□□□□□ -0.86
Cntn1-202ENSMUST00000068378 Slc24a3Q99PD7 645 aa9.68□□□□□ -0.86
Cntn1-202ENSMUST00000068378 Noc3lQ8VI84 807 aaKnown RBP9.68□□□□□ -0.86
Cntn1-202ENSMUST00000068378 Washc2Q6PGL7 1334 aa9.67□□□□□ -0.86
Cntn1-202ENSMUST00000068378 Fam50aQ9WV03 339 aaKnown RBP9.67□□□□□ -0.86
Cntn1-202ENSMUST00000068378 Ms4a5Q810P8 197 aa9.66□□□□□ -0.86
Cntn1-202ENSMUST00000068378 Ak7Q9D2H2 614 aa9.66□□□□□ -0.86
Cntn1-202ENSMUST00000068378 AU015836B2RUM3 263 aa9.65□□□□□ -0.86
Cntn1-202ENSMUST00000068378 Dusp27Q148W8 1138 aa9.64□□□□□ -0.87
Cntn1-202ENSMUST00000068378 Trim26Q99PN3 545 aa9.64□□□□□ -0.87
Cntn1-202ENSMUST00000068378 Fam135aQ6NS59 1506 aa9.63□□□□□ -0.87
Cntn1-202ENSMUST00000068378 Slc7a3P70423 618 aa9.63□□□□□ -0.87
Cntn1-202ENSMUST00000068378 Zcwpw1Q6IR42 630 aa9.63□□□□□ -0.87
Cntn1-202ENSMUST00000068378 Dnajc14Q921R4 703 aa9.63□□□□□ -0.87
Cntn1-202ENSMUST00000068378 Arhgap27A2AB59 869 aa9.62□□□□□ -0.87
Cntn1-202ENSMUST00000068378 Ythdc1E9Q5K9 736 aaKnown RBP9.62□□□□□ -0.87
Cntn1-202ENSMUST00000068378 Rsph6aQ8CDR2 708 aa9.62□□□□□ -0.87
Cntn1-202ENSMUST00000068378 Wdr62Q3U3T8 1523 aa9.62□□□□□ -0.87
Cntn1-202ENSMUST00000068378 Frmpd1A2AKB4 1549 aa9.6□□□□□ -0.87
Cntn1-202ENSMUST00000068378 Tmed8Q3UHI4 326 aa9.59□□□□□ -0.87
Cntn1-202ENSMUST00000068378 Brd2Q7JJ13 798 aaKnown RBP9.59□□□□□ -0.87
Cntn1-202ENSMUST00000068378 Slc24a1Q91WD8 1130 aa9.58□□□□□ -0.88
Cntn1-202ENSMUST00000068378 Phldb1Q6PDH0 1371 aaKnown RBP9.58□□□□□ -0.88
Cntn1-202ENSMUST00000068378 Hmgb1P63158 215 aaKnown RBP9.58□□□□□ -0.88
Cntn1-202ENSMUST00000068378 Ccdc85aQ5SP85 500 aa9.58□□□□□ -0.88
Cntn1-202ENSMUST00000068378 4933402E13RikQ9D4D2 429 aa9.57□□□□□ -0.88
Cntn1-202ENSMUST00000068378 Nom1Q3UFM5 854 aaKnown RBP9.56□□□□□ -0.88
Cntn1-202ENSMUST00000068378 Apbb1Q9QXJ1 710 aa9.56□□□□□ -0.88
Cntn1-202ENSMUST00000068378 Rimbp2Q80U40 1072 aa9.56□□□□□ -0.88
Cntn1-202ENSMUST00000068378 P3h3Q8CG70 732 aa9.56□□□□□ -0.88
Cntn1-202ENSMUST00000068378 BbxQ8VBW5 907 aa9.55□□□□□ -0.88
Cntn1-202ENSMUST00000068378 Rpap1Q80TE0 1409 aa9.55□□□□□ -0.88
Cntn1-202ENSMUST00000068378 PtmaP26350 111 aa9.55□□□□□ -0.88
Cntn1-202ENSMUST00000068378 Sparcl1P70663 650 aa9.55□□□□□ -0.88
Cntn1-202ENSMUST00000068378 CadpsQ80TJ1 1355 aa9.54□□□□□ -0.88
Cntn1-202ENSMUST00000068378 Safb2Q80YR5 991 aaKnown RBP9.54□□□□□ -0.88
Cntn1-202ENSMUST00000068378 Paxip1Q6NZQ4 1056 aa9.54□□□□□ -0.88
Cntn1-202ENSMUST00000068378 Fam117aQ7TNF9 451 aa9.53□□□□□ -0.88
Cntn1-202ENSMUST00000068378 Psmd1Q3TXS7 953 aa9.53□□□□□ -0.88
Cntn1-202ENSMUST00000068378 MpndQ3TV65 487 aa9.52□□□□□ -0.89
Cntn1-202ENSMUST00000068378 Secisbp2lQ6A098 1086 aaKnown RBP9.51□□□□□ -0.89
Cntn1-202ENSMUST00000068378 Rgl2Q61193 778 aa9.51□□□□□ -0.89
Cntn1-202ENSMUST00000068378 Tex2Q6ZPJ0 1128 aaKnown RBP9.51□□□□□ -0.89
Cntn1-202ENSMUST00000068378 Speer4f1Q9D5Q6 258 aa9.51□□□□□ -0.89
Cntn1-202ENSMUST00000068378 Arid4aF8VPQ2 1261 aaKnown RBP9.5□□□□□ -0.89
Cntn1-202ENSMUST00000068378 Pkd2O35245 966 aa9.5□□□□□ -0.89
Cntn1-202ENSMUST00000068378 Mtmr7Q9Z2C9 660 aa9.5□□□□□ -0.89
Cntn1-202ENSMUST00000068378 Cep164Q5DU05 1446 aa9.5□□□□□ -0.89
Cntn1-202ENSMUST00000068378 Mroh3A0A1D5RM54 893 aa9.5□□□□□ -0.89
Cntn1-202ENSMUST00000068378 Ubl4bQ9CQ84 188 aa9.5□□□□□ -0.89
Cntn1-202ENSMUST00000068378 Kcnh8P59111 1102 aa9.5□□□□□ -0.89
Cntn1-202ENSMUST00000068378 Hdac6Q9Z2V5 1149 aa9.5□□□□□ -0.89
Cntn1-202ENSMUST00000068378 CftrP26361 1476 aa9.5□□□□□ -0.89
Cntn1-202ENSMUST00000068378 Brd4Q9ESU6 1400 aaKnown RBP9.49□□□□□ -0.89
Cntn1-202ENSMUST00000068378 Ncoa4Q5U4H9 625 aa9.49□□□□□ -0.89
Cntn1-202ENSMUST00000068378 Cttnbp2B9EJA2 1648 aa9.48□□□□□ -0.89
Cntn1-202ENSMUST00000068378 Spock2Q9ER58 423 aa9.47□□□□□ -0.89
Cntn1-202ENSMUST00000068378 Nap1l5Q9JJF0 156 aa9.47□□□□□ -0.89
Cntn1-202ENSMUST00000068378 Gtpbp6Q3U6U5 514 aa9.47□□□□□ -0.89
Cntn1-202ENSMUST00000068378 Synj1Q8CHC4 1574 aa9.47□□□□□ -0.89
Cntn1-202ENSMUST00000068378 Ppm1gQ61074 542 aa9.46□□□□□ -0.89
Cntn1-202ENSMUST00000068378 PogkQ80TC5 607 aa9.46□□□□□ -0.9
Cntn1-202ENSMUST00000068378 Tnnt2P50752 301 aa9.46□□□□□ -0.9
Cntn1-202ENSMUST00000068378 Stac3Q8BZ71 360 aa9.46□□□□□ -0.9
Cntn1-202ENSMUST00000068378 Sart3Q9JLI8 962 aaKnown RBP9.45□□□□□ -0.9
Cntn1-202ENSMUST00000068378 Fam43bA2AM80 330 aa9.45□□□□□ -0.9
Cntn1-202ENSMUST00000068378 Map4k4P97820 1233 aaKnown RBP9.45□□□□□ -0.9
Cntn1-202ENSMUST00000068378 Eid3Q3V124 375 aa9.44□□□□□ -0.9
Cntn1-202ENSMUST00000068378 Gys2Q8VCB3 704 aa9.44□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 76.9 ms