RNA–Protein interactions for RNA: ENSMUST00000068156.7

Vps13a-201, Transcript of Vacuolar protein sorting-associated protein 13A, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Vps13a, Length 10,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13a-201ENSMUST00000068156 Tmf1B9EKI3 1091 aa9.37□□□□□ -0.91
Vps13a-201ENSMUST00000068156 NudcO35685 332 aaKnown RBP9.36□□□□□ -0.91
Vps13a-201ENSMUST00000068156 Iqcf3Q9D498 203 aa9.36□□□□□ -0.91
Vps13a-201ENSMUST00000068156 Trim30dE9PWL0 497 aa9.36□□□□□ -0.91
Vps13a-201ENSMUST00000068156 Stard8Q8K031 1019 aa9.36□□□□□ -0.91
Vps13a-201ENSMUST00000068156 Apbb1Q9QXJ1 710 aa9.36□□□□□ -0.91
Vps13a-201ENSMUST00000068156 NgefQ8CHT1 710 aa9.36□□□□□ -0.91
Vps13a-201ENSMUST00000068156 Chmp4bQ9D8B3 224 aaKnown RBP9.35□□□□□ -0.91
Vps13a-201ENSMUST00000068156 Mbd3Q9Z2D8 285 aaKnown RBP9.35□□□□□ -0.91
Vps13a-201ENSMUST00000068156 Dcaf11Q91VU6 549 aa9.35□□□□□ -0.91
Vps13a-201ENSMUST00000068156 Frmpd1A2AKB4 1549 aa9.34□□□□□ -0.91
Vps13a-201ENSMUST00000068156 Mak16Q8BGS0 296 aaKnown RBP9.34□□□□□ -0.91
Vps13a-201ENSMUST00000068156 Rwdd1Q9CQK7 243 aa9.34□□□□□ -0.91
Vps13a-201ENSMUST00000068156 Cc2d2bA0A286YDU8 1405 aa9.33□□□□□ -0.92
Vps13a-201ENSMUST00000068156 Rock2P70336 1388 aa9.33□□□□□ -0.92
Vps13a-201ENSMUST00000068156 Spag9Q58A65 1321 aaKnown RBP9.33□□□□□ -0.92
Vps13a-201ENSMUST00000068156 Rad54l2Q99NG0 1466 aa9.33□□□□□ -0.92
Vps13a-201ENSMUST00000068156 Soga1E1U8D0 1418 aa9.33□□□□□ -0.92
Vps13a-201ENSMUST00000068156 Usp47Q8BY87 1376 aa9.32□□□□□ -0.92
Vps13a-201ENSMUST00000068156 Gm6268A2A3U9 297 aa9.32□□□□□ -0.92
Vps13a-201ENSMUST00000068156 Speer4f1Q9D5Q6 258 aa9.32□□□□□ -0.92
Vps13a-201ENSMUST00000068156 PogzQ8BZH4 1409 aaKnown RBP9.32□□□□□ -0.92
Vps13a-201ENSMUST00000068156 Ncoa2Q61026 1462 aa9.32□□□□□ -0.92
Vps13a-201ENSMUST00000068156 CanxP35564 591 aaKnown RBP9.32□□□□□ -0.92
Vps13a-201ENSMUST00000068156 Duox2A2AQ99 1517 aa9.32□□□□□ -0.92
Vps13a-201ENSMUST00000068156 Fam71e1A1L3C1 212 aa9.32□□□□□ -0.92
Vps13a-201ENSMUST00000068156 Hsp90ab1P11499 724 aaKnown RBP9.32□□□□□ -0.92
Vps13a-201ENSMUST00000068156 Stk26Q99JT2 416 aa9.32□□□□□ -0.92
Vps13a-201ENSMUST00000068156 Grin2bQ01097 1482 aa9.31□□□□□ -0.92
Vps13a-201ENSMUST00000068156 Tdrd9Q14BI7 1383 aa9.3□□□□□ -0.92
Vps13a-201ENSMUST00000068156 Mroh2bQ7M6Y6 1581 aa9.3□□□□□ -0.92
Vps13a-201ENSMUST00000068156 Psme1P97371 249 aa9.3□□□□□ -0.92
Vps13a-201ENSMUST00000068156 Pabpn1Q8CCS6 302 aaKnown RBP9.3□□□□□ -0.92
Vps13a-201ENSMUST00000068156 Fan1Q69ZT1 1020 aa9.29□□□□□ -0.92
Vps13a-201ENSMUST00000068156 Irx6Q9ER75 438 aa9.29□□□□□ -0.92
Vps13a-201ENSMUST00000068156 Hsp90aa1P07901 733 aaKnown RBP9.29□□□□□ -0.92
Vps13a-201ENSMUST00000068156 Cux1P53564 1515 aa9.29□□□□□ -0.92
Vps13a-201ENSMUST00000068156 SafbD3YXK2 937 aaKnown RBP9.28□□□□□ -0.92
Vps13a-201ENSMUST00000068156 Ppm1gQ61074 542 aa9.28□□□□□ -0.92
Vps13a-201ENSMUST00000068156 Naip1Q9QWK5 1403 aa9.28□□□□□ -0.92
Vps13a-201ENSMUST00000068156 Slc4a1apE9PX68 744 aa9.28□□□□□ -0.92
Vps13a-201ENSMUST00000068156 Golga2Q921M4 999 aa9.28□□□□□ -0.92
Vps13a-201ENSMUST00000068156 Map3k1P53349 1493 aa9.28□□□□□ -0.92
Vps13a-201ENSMUST00000068156 Ankrd36D3Z4K0 1415 aa9.28□□□□□ -0.92
Vps13a-201ENSMUST00000068156 Map7O88735 730 aa9.27□□□□□ -0.92
Vps13a-201ENSMUST00000068156 Urb2E9Q7L1 1524 aaKnown RBP9.27□□□□□ -0.93
Vps13a-201ENSMUST00000068156 Smg6P61406 1418 aaKnown RBP9.27□□□□□ -0.93
Vps13a-201ENSMUST00000068156 Tcerg1Q8CGF7 1100 aaKnown RBP9.27□□□□□ -0.93
Vps13a-201ENSMUST00000068156 Txndc2Q6P902 515 aa9.26□□□□□ -0.93
Vps13a-201ENSMUST00000068156 Vps8Q0P5W1 1427 aa9.26□□□□□ -0.93
Vps13a-201ENSMUST00000068156 PtprkP35822 1457 aa9.26□□□□□ -0.93
Vps13a-201ENSMUST00000068156 Polr1aO35134 1717 aaKnown RBP9.26□□□□□ -0.93
Vps13a-201ENSMUST00000068156 Ift140E9PY46 1464 aa9.26□□□□□ -0.93
Vps13a-201ENSMUST00000068156 U2af1Q9D883 239 aaKnown RBP9.26□□□□□ -0.93
Vps13a-201ENSMUST00000068156 BicraF8VPZ9 1578 aa9.25□□□□□ -0.93
Vps13a-201ENSMUST00000068156 Ccdc9Q8VC31 543 aaKnown RBP9.25□□□□□ -0.93
Vps13a-201ENSMUST00000068156 Prdm16A2A935 1275 aa9.25□□□□□ -0.93
Vps13a-201ENSMUST00000068156 Usp40Q8BWR4 1235 aa9.25□□□□□ -0.93
Vps13a-201ENSMUST00000068156 Cc2d2aQ8CFW7 1633 aa9.24□□□□□ -0.93
Vps13a-201ENSMUST00000068156 Gm7298A0A0N4SVU1 1476 aa9.24□□□□□ -0.93
Vps13a-201ENSMUST00000068156 Dbr1Q923B1 550 aa9.24□□□□□ -0.93
Vps13a-201ENSMUST00000068156 Rtf1A2AQ19 715 aaKnown RBP9.24□□□□□ -0.93
Vps13a-201ENSMUST00000068156 Pank3Q8R2W9 370 aa9.24□□□□□ -0.93
Vps13a-201ENSMUST00000068156 Mrc2Q64449 1479 aa9.24□□□□□ -0.93
Vps13a-201ENSMUST00000068156 CenpjQ569L8 1344 aa9.23□□□□□ -0.93
Vps13a-201ENSMUST00000068156 Arhgef5E9Q7D5 1581 aa9.23□□□□□ -0.93
Vps13a-201ENSMUST00000068156 Birc3O08863 600 aa9.23□□□□□ -0.93
Vps13a-201ENSMUST00000068156 1700019A02RikA0A087WPV9 146 aa9.23□□□□□ -0.93
Vps13a-201ENSMUST00000068156 Arhgap31A6X8Z5 1425 aa9.23□□□□□ -0.93
Vps13a-201ENSMUST00000068156 Fam163aQ8CAA5 168 aa9.22□□□□□ -0.93
Vps13a-201ENSMUST00000068156 Chmp5Q9D7S9 219 aa9.22□□□□□ -0.93
Vps13a-201ENSMUST00000068156 Arap1Q4LDD4 1452 aa9.22□□□□□ -0.93
Vps13a-201ENSMUST00000068156 Wdr62Q3U3T8 1523 aa9.22□□□□□ -0.93
Vps13a-201ENSMUST00000068156 Utp14aQ640M1 767 aaKnown RBP9.22□□□□□ -0.93
Vps13a-201ENSMUST00000068156 B4galnt3Q6L8S8 986 aa9.22□□□□□ -0.93
Vps13a-201ENSMUST00000068156 Dapk1Q80YE7 1442 aa9.22□□□□□ -0.93
Vps13a-201ENSMUST00000068156 Htatsf1Q8BGC0 757 aa9.22□□□□□ -0.93
Vps13a-201ENSMUST00000068156 HnrnpuQ8VEK3 800 aaKnown RBP9.22□□□□□ -0.93
Vps13a-201ENSMUST00000068156 Nsd2Q8BVE8 1365 aa9.21□□□□□ -0.93
Vps13a-201ENSMUST00000068156 KnstrnQ9D9Z1 312 aaKnown RBP9.21□□□□□ -0.93
Vps13a-201ENSMUST00000068156 Fgd6Q69ZL1 1399 aa9.21□□□□□ -0.93
Vps13a-201ENSMUST00000068156 Supt16hQ920B9 1047 aa9.21□□□□□ -0.93
Vps13a-201ENSMUST00000068156 CrbnQ8C7D2 445 aa9.21□□□□□ -0.94
Vps13a-201ENSMUST00000068156 U2surpQ6NV83 1029 aaKnown RBP9.2□□□□□ -0.94
Vps13a-201ENSMUST00000068156 Zfp644E9QA22 1323 aa9.2□□□□□ -0.94
Vps13a-201ENSMUST00000068156 Pde4cQ3UEI1 686 aa9.2□□□□□ -0.94
Vps13a-201ENSMUST00000068156 Armcx1Q9CX83 456 aa9.2□□□□□ -0.94
Vps13a-201ENSMUST00000068156 Ccdc27Q3V036 639 aa9.2□□□□□ -0.94
Vps13a-201ENSMUST00000068156 EspnQ9ET47 871 aa9.19□□□□□ -0.94
Vps13a-201ENSMUST00000068156 Inpp5dQ9ES52 1191 aa9.19□□□□□ -0.94
Vps13a-201ENSMUST00000068156 Slc4a3P16283 1227 aa9.19□□□□□ -0.94
Vps13a-201ENSMUST00000068156 Ncapd3Q6ZQK0 1506 aa9.19□□□□□ -0.94
Vps13a-201ENSMUST00000068156 Fam184bQ0KK56 942 aa9.19□□□□□ -0.94
Vps13a-201ENSMUST00000068156 DekQ7TNV0 380 aaKnown RBP9.19□□□□□ -0.94
Vps13a-201ENSMUST00000068156 CadpsQ80TJ1 1355 aa9.19□□□□□ -0.94
Vps13a-201ENSMUST00000068156 Shq1Q7TMX5 569 aa9.18□□□□□ -0.94
Vps13a-201ENSMUST00000068156 Top2bQ64511 1612 aa9.18□□□□□ -0.94
Vps13a-201ENSMUST00000068156 Il16O54824 1322 aa9.18□□□□□ -0.94
Vps13a-201ENSMUST00000068156 Kif7B7ZNG0 1348 aa9.18□□□□□ -0.94
Vps13a-201ENSMUST00000068156 ErbinQ80TH2 1402 aa9.18□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 53.1 ms