RNA–Protein interactions for RNA: ENSMUST00000053287.5

Usp42-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Usp42, Length 5,151 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42-201ENSMUST00000053287 Ccnb3Q810T2 1396 aa18.76■□□□□ 0.59
Usp42-201ENSMUST00000053287 Crocc2F6XLV1 1638 aa18.75■□□□□ 0.59
Usp42-201ENSMUST00000053287 Atad2bE9Q166 1460 aaKnown RBP18.74■□□□□ 0.59
Usp42-201ENSMUST00000053287 Arhgap27A2AB59 869 aa18.73■□□□□ 0.59
Usp42-201ENSMUST00000053287 Rundc1Q0VDN7 615 aa18.72■□□□□ 0.59
Usp42-201ENSMUST00000053287 Mre11Q61216 706 aa18.72■□□□□ 0.59
Usp42-201ENSMUST00000053287 Dbr1Q923B1 550 aa18.72■□□□□ 0.59
Usp42-201ENSMUST00000053287 Hsp90ab1P11499 724 aaKnown RBP18.71■□□□□ 0.59
Usp42-201ENSMUST00000053287 ArxO35085 564 aa18.71■□□□□ 0.59
Usp42-201ENSMUST00000053287 Prkrip1Q9CWV6 186 aaKnown RBP18.71■□□□□ 0.59
Usp42-201ENSMUST00000053287 AU015836B2RUM3 263 aa18.71■□□□□ 0.59
Usp42-201ENSMUST00000053287 L3mbtl2P59178 703 aa18.7■□□□□ 0.58
Usp42-201ENSMUST00000053287 Zbtb4Q5F293 982 aa18.7■□□□□ 0.58
Usp42-201ENSMUST00000053287 Gm7298A0A0N4SVU1 1476 aa18.7■□□□□ 0.58
Usp42-201ENSMUST00000053287 EspnQ9ET47 871 aa18.7■□□□□ 0.58
Usp42-201ENSMUST00000053287 Camsap1A2AHC3 1581 aa18.69■□□□□ 0.58
Usp42-201ENSMUST00000053287 Grin2bQ01097 1482 aa18.68■□□□□ 0.58
Usp42-201ENSMUST00000053287 Mak16Q8BGS0 296 aaKnown RBP18.68■□□□□ 0.58
Usp42-201ENSMUST00000053287 Sart3Q9JLI8 962 aaKnown RBP18.68■□□□□ 0.58
Usp42-201ENSMUST00000053287 Htatsf1Q8BGC0 757 aa18.67■□□□□ 0.58
Usp42-201ENSMUST00000053287 Trim30dE9PWL0 497 aa18.67■□□□□ 0.58
Usp42-201ENSMUST00000053287 A2mQ6GQT1 1474 aa18.66■□□□□ 0.58
Usp42-201ENSMUST00000053287 Pds5bQ4VA53 1446 aaKnown RBP18.66■□□□□ 0.58
Usp42-201ENSMUST00000053287 Zscan21Q07231 555 aa18.65■□□□□ 0.58
Usp42-201ENSMUST00000053287 Lamc3Q9R0B6 1581 aa18.63■□□□□ 0.57
Usp42-201ENSMUST00000053287 Pdcl3Q8BVF2 240 aa18.62■□□□□ 0.57
Usp42-201ENSMUST00000053287 Pprc1Q6NZN1 1644 aa18.62■□□□□ 0.57
Usp42-201ENSMUST00000053287 Ttll13A4Q9F6 804 aa18.62■□□□□ 0.57
Usp42-201ENSMUST00000053287 Plekhg5Q66T02 1073 aa18.62■□□□□ 0.57
Usp42-201ENSMUST00000053287 Grwd1Q810D6 446 aaKnown RBP18.62■□□□□ 0.57
Usp42-201ENSMUST00000053287 Cabp1Q9JLK7 227 aa18.62■□□□□ 0.57
Usp42-201ENSMUST00000053287 Ercc6F8VPZ5 1481 aa18.62■□□□□ 0.57
Usp42-201ENSMUST00000053287 EprsQ8CGC7 1512 aaKnown RBP18.62■□□□□ 0.57
Usp42-201ENSMUST00000053287 Thoc2B1AZI6 1594 aaKnown RBP18.62■□□□□ 0.57
Usp42-201ENSMUST00000053287 Dapk1Q80YE7 1442 aa18.61■□□□□ 0.57
Usp42-201ENSMUST00000053287 Chmp5Q9D7S9 219 aa18.6■□□□□ 0.57
Usp42-201ENSMUST00000053287 Mtus2Q3UHD3 1353 aa18.6■□□□□ 0.57
Usp42-201ENSMUST00000053287 Peg3Q3URU2 1571 aa18.59■□□□□ 0.57
Usp42-201ENSMUST00000053287 Kif27Q7M6Z4 1394 aa18.59■□□□□ 0.57
Usp42-201ENSMUST00000053287 Zbtb7cQ8VCZ7 619 aa18.58■□□□□ 0.56
Usp42-201ENSMUST00000053287 NudcO35685 332 aaKnown RBP18.57■□□□□ 0.56
Usp42-201ENSMUST00000053287 Rwdd1Q9CQK7 243 aa18.57■□□□□ 0.56
Usp42-201ENSMUST00000053287 Rock2P70336 1388 aa18.57■□□□□ 0.56
Usp42-201ENSMUST00000053287 Dnttip2Q8R2M2 758 aaKnown RBP18.56■□□□□ 0.56
Usp42-201ENSMUST00000053287 Plekhh2Q8C115 1491 aa18.55■□□□□ 0.56
Usp42-201ENSMUST00000053287 Kank1E9Q238 1360 aa18.55■□□□□ 0.56
Usp42-201ENSMUST00000053287 Nlrp6Q91WS2 869 aa18.54■□□□□ 0.56
Usp42-201ENSMUST00000053287 Apbb1Q9QXJ1 710 aa18.54■□□□□ 0.56
Usp42-201ENSMUST00000053287 Polr1aO35134 1717 aaKnown RBP18.54■□□□□ 0.56
Usp42-201ENSMUST00000053287 Ipo8Q7TMY7 1010 aa18.53■□□□□ 0.56
Usp42-201ENSMUST00000053287 Ift140E9PY46 1464 aa18.53■□□□□ 0.56
Usp42-201ENSMUST00000053287 Lmo7E9PYF4 1699 aaKnown RBP18.53■□□□□ 0.56
Usp42-201ENSMUST00000053287 Zfp444Q3TDV8 331 aaKnown RBP18.53■□□□□ 0.56
Usp42-201ENSMUST00000053287 Cul7Q8VE73 1689 aa18.51■□□□□ 0.55
Usp42-201ENSMUST00000053287 Rprd2Q6NXI6 1469 aaKnown RBP18.5■□□□□ 0.55
Usp42-201ENSMUST00000053287 Rpgrip1lQ8CG73 1264 aa18.5■□□□□ 0.55
Usp42-201ENSMUST00000053287 Mapk8ip3Q9ESN9 1337 aa18.49■□□□□ 0.55
Usp42-201ENSMUST00000053287 4930567H17RikQ3V0K5 233 aa18.48■□□□□ 0.55
Usp42-201ENSMUST00000053287 Gm1043A0A140LJC2 1431 aa18.48■□□□□ 0.55
Usp42-201ENSMUST00000053287 Urb2E9Q7L1 1524 aaKnown RBP18.48■□□□□ 0.55
Usp42-201ENSMUST00000053287 Spryd3E9Q9B3 442 aa18.47■□□□□ 0.55
Usp42-201ENSMUST00000053287 Zfp644E9QA22 1323 aa18.47■□□□□ 0.55
Usp42-201ENSMUST00000053287 4933402E13RikQ9D4D2 429 aa18.46■□□□□ 0.55
Usp42-201ENSMUST00000053287 Gtf2a1Q99PM3 378 aa18.46■□□□□ 0.55
Usp42-201ENSMUST00000053287 Rfx7F8VPJ6 1459 aa18.45■□□□□ 0.54
Usp42-201ENSMUST00000053287 Ubl4bQ9CQ84 188 aa18.44■□□□□ 0.54
Usp42-201ENSMUST00000053287 Frmpd1A2AKB4 1549 aa18.43■□□□□ 0.54
Usp42-201ENSMUST00000053287 Eif2s2Q99L45 331 aaKnown RBP18.42■□□□□ 0.54
Usp42-201ENSMUST00000053287 Mug1P28665 1476 aa18.42■□□□□ 0.54
Usp42-201ENSMUST00000053287 Os9Q8K2C7 672 aa18.42■□□□□ 0.54
Usp42-201ENSMUST00000053287 Trak1Q6PD31 939 aa18.41■□□□□ 0.54
Usp42-201ENSMUST00000053287 Rrp9Q91WM3 475 aaKnown RBP18.41■□□□□ 0.54
Usp42-201ENSMUST00000053287 SynmQ70IV5 1561 aa18.41■□□□□ 0.54
Usp42-201ENSMUST00000053287 Fhod3Q76LL6 1578 aa18.41■□□□□ 0.54
Usp42-201ENSMUST00000053287 CrbnQ8C7D2 445 aa18.41■□□□□ 0.54
Usp42-201ENSMUST00000053287 Trim44Q9QXA7 346 aa18.41■□□□□ 0.54
Usp42-201ENSMUST00000053287 Mink1Q9JM52 1308 aa18.4■□□□□ 0.54
Usp42-201ENSMUST00000053287 Cux2P70298 1426 aa18.4■□□□□ 0.54
Usp42-201ENSMUST00000053287 Polr3glQ8R0C0 218 aa18.4■□□□□ 0.54
Usp42-201ENSMUST00000053287 Nkx1-2P42580 305 aa18.39■□□□□ 0.53
Usp42-201ENSMUST00000053287 Ak7Q9D2H2 614 aa18.39■□□□□ 0.53
Usp42-201ENSMUST00000053287 Rtn4Q99P72 1162 aaKnown RBP18.39■□□□□ 0.53
Usp42-201ENSMUST00000053287 Pik3c2gO70167 1506 aa18.39■□□□□ 0.53
Usp42-201ENSMUST00000053287 Taok2Q6ZQ29 1240 aa18.38■□□□□ 0.53
Usp42-201ENSMUST00000053287 Gm6268A2A3U9 297 aa18.38■□□□□ 0.53
Usp42-201ENSMUST00000053287 Neurod2Q62414 383 aa18.37■□□□□ 0.53
Usp42-201ENSMUST00000053287 Rock1P70335 1354 aa18.37■□□□□ 0.53
Usp42-201ENSMUST00000053287 LrpprcQ6PB66 1392 aaKnown RBP18.37■□□□□ 0.53
Usp42-201ENSMUST00000053287 Wdr62Q3U3T8 1523 aa18.36■□□□□ 0.53
Usp42-201ENSMUST00000053287 Q7TT23 1179 aa18.35■□□□□ 0.53
Usp42-201ENSMUST00000053287 Mroh3A0A1D5RM54 893 aa18.35■□□□□ 0.53
Usp42-201ENSMUST00000053287 NexmifQ5DTT1 1515 aa18.35■□□□□ 0.53
Usp42-201ENSMUST00000053287 Erbb3Q61526 1339 aa18.34■□□□□ 0.53
Usp42-201ENSMUST00000053287 Speer4f1Q9D5Q6 258 aa18.33■□□□□ 0.52
Usp42-201ENSMUST00000053287 Kif16bB1AVY7 1312 aa18.33■□□□□ 0.52
Usp42-201ENSMUST00000053287 Clstn2Q9ER65 966 aa18.33■□□□□ 0.52
Usp42-201ENSMUST00000053287 TnikP83510 1323 aa18.32■□□□□ 0.52
Usp42-201ENSMUST00000053287 Rrp12Q6P5B0 1295 aaKnown RBP18.32■□□□□ 0.52
Usp42-201ENSMUST00000053287 Tmf1B9EKI3 1091 aa18.32■□□□□ 0.52
Usp42-201ENSMUST00000053287 Plcb2A3KGF7 1181 aa18.31■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 72 ms