RNA–Protein interactions for RNA: ENSMUST00000052965.6

Nipbl-201, Transcript of Nipped-B-like protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nipbl, Length 8,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nipbl-201ENSMUST00000052965 MccE9PWI3 1003 aa13.53□□□□□ -0.24
Nipbl-201ENSMUST00000052965 Cep162Q6ZQ06 1403 aa13.53□□□□□ -0.24
Nipbl-201ENSMUST00000052965 IqubQ8CDK3 788 aa13.52□□□□□ -0.24
Nipbl-201ENSMUST00000052965 Apbb1Q9QXJ1 710 aa13.51□□□□□ -0.25
Nipbl-201ENSMUST00000052965 Kiaa0754Q69ZZ9 979 aa13.51□□□□□ -0.25
Nipbl-201ENSMUST00000052965 Wwc2Q6NXJ0 1187 aa13.51□□□□□ -0.25
Nipbl-201ENSMUST00000052965 Fyco1Q8VDC1 1437 aa13.5□□□□□ -0.25
Nipbl-201ENSMUST00000052965 Arhgap35Q91YM2 1499 aa13.5□□□□□ -0.25
Nipbl-201ENSMUST00000052965 Trim30aP15533 496 aa13.5□□□□□ -0.25
Nipbl-201ENSMUST00000052965 Smg6P61406 1418 aaKnown RBP13.49□□□□□ -0.25
Nipbl-201ENSMUST00000052965 Tpm2P58774 284 aa13.48□□□□□ -0.25
Nipbl-201ENSMUST00000052965 Mroh3A0A1D5RM54 893 aa13.48□□□□□ -0.25
Nipbl-201ENSMUST00000052965 Rsph3aQ3UFY4 516 aa13.48□□□□□ -0.25
Nipbl-201ENSMUST00000052965 Gtf2a1Q99PM3 378 aa13.48□□□□□ -0.25
Nipbl-201ENSMUST00000052965 Ccdc88bQ4QRL3 1481 aa13.47□□□□□ -0.25
Nipbl-201ENSMUST00000052965 Glipr1l2Q9CQ35 332 aa13.47□□□□□ -0.25
Nipbl-201ENSMUST00000052965 PnnO35691 725 aaKnown RBP13.47□□□□□ -0.25
Nipbl-201ENSMUST00000052965 Srpk2O54781 681 aaKnown RBP13.46□□□□□ -0.25
Nipbl-201ENSMUST00000052965 ChgaP26339 463 aaKnown RBP13.46□□□□□ -0.26
Nipbl-201ENSMUST00000052965 Grwd1Q810D6 446 aaKnown RBP13.46□□□□□ -0.26
Nipbl-201ENSMUST00000052965 SlkO54988 1233 aa13.44□□□□□ -0.26
Nipbl-201ENSMUST00000052965 Baz1bQ9Z277 1479 aa13.44□□□□□ -0.26
Nipbl-201ENSMUST00000052965 Cspp1B2RX88 1205 aa13.44□□□□□ -0.26
Nipbl-201ENSMUST00000052965 Zfp777B9EKF4 885 aa13.44□□□□□ -0.26
Nipbl-201ENSMUST00000052965 Exosc9Q9JHI7 438 aaKnown RBP13.43□□□□□ -0.26
Nipbl-201ENSMUST00000052965 Sycp2Q9CUU3 1500 aa13.43□□□□□ -0.26
Nipbl-201ENSMUST00000052965 NudcO35685 332 aaKnown RBP13.42□□□□□ -0.26
Nipbl-201ENSMUST00000052965 Kdm2aP59997 1161 aa13.42□□□□□ -0.26
Nipbl-201ENSMUST00000052965 Synj1Q8CHC4 1574 aa13.41□□□□□ -0.26
Nipbl-201ENSMUST00000052965 Zscan21Q07231 555 aa13.41□□□□□ -0.26
Nipbl-201ENSMUST00000052965 HnrnpuQ8VEK3 800 aaKnown RBP13.41□□□□□ -0.26
Nipbl-201ENSMUST00000052965 Fam43aQ8BUP8 424 aa13.41□□□□□ -0.26
Nipbl-201ENSMUST00000052965 Cc2d2aQ8CFW7 1633 aa13.41□□□□□ -0.26
Nipbl-201ENSMUST00000052965 Pds5bQ4VA53 1446 aaKnown RBP13.41□□□□□ -0.26
Nipbl-201ENSMUST00000052965 Ylpm1Q9R0I7 1386 aaKnown RBP13.4□□□□□ -0.26
Nipbl-201ENSMUST00000052965 Taf3Q5HZG4 932 aa13.4□□□□□ -0.26
Nipbl-201ENSMUST00000052965 Pcmtd1P59913 357 aa13.4□□□□□ -0.26
Nipbl-201ENSMUST00000052965 Gm20521D3Z5F7 333 aa13.4□□□□□ -0.26
Nipbl-201ENSMUST00000052965 Phf14Q9D4H9 881 aa13.39□□□□□ -0.27
Nipbl-201ENSMUST00000052965 Neurod2Q62414 383 aa13.39□□□□□ -0.27
Nipbl-201ENSMUST00000052965 Arhgap27A2AB59 869 aa13.38□□□□□ -0.27
Nipbl-201ENSMUST00000052965 Armcx1Q9CX83 456 aa13.38□□□□□ -0.27
Nipbl-201ENSMUST00000052965 Exoc6Q8R313 802 aa13.38□□□□□ -0.27
Nipbl-201ENSMUST00000052965 Smarce1O54941 411 aaKnown RBP13.38□□□□□ -0.27
Nipbl-201ENSMUST00000052965 Kif27Q7M6Z4 1394 aa13.36□□□□□ -0.27
Nipbl-201ENSMUST00000052965 Smarca4Q3TKT4 1613 aaKnown RBP13.36□□□□□ -0.27
Nipbl-201ENSMUST00000052965 Iqcf3Q9D498 203 aa13.36□□□□□ -0.27
Nipbl-201ENSMUST00000052965 Atp6v1dP57746 247 aa13.36□□□□□ -0.27
Nipbl-201ENSMUST00000052965 Safb2Q80YR5 991 aaKnown RBP13.36□□□□□ -0.27
Nipbl-201ENSMUST00000052965 Sart3Q9JLI8 962 aaKnown RBP13.36□□□□□ -0.27
Nipbl-201ENSMUST00000052965 Hspa5P20029 655 aaKnown RBP13.35□□□□□ -0.27
Nipbl-201ENSMUST00000052965 CalrP14211 416 aaKnown RBP13.35□□□□□ -0.27
Nipbl-201ENSMUST00000052965 Dusp9Q7TNL7 452 aa13.35□□□□□ -0.27
Nipbl-201ENSMUST00000052965 Polr1aO35134 1717 aaKnown RBP13.35□□□□□ -0.27
Nipbl-201ENSMUST00000052965 Gm6268A2A3U9 297 aa13.35□□□□□ -0.27
Nipbl-201ENSMUST00000052965 Rrp7aQ9D1C9 280 aaKnown RBP13.34□□□□□ -0.27
Nipbl-201ENSMUST00000052965 Hsp90b1P08113 802 aaKnown RBP13.33□□□□□ -0.28
Nipbl-201ENSMUST00000052965 Isy1Q69ZQ2 285 aaKnown RBP13.33□□□□□ -0.28
Nipbl-201ENSMUST00000052965 Rock2P70336 1388 aa13.32□□□□□ -0.28
Nipbl-201ENSMUST00000052965 Tmf1B9EKI3 1091 aa13.32□□□□□ -0.28
Nipbl-201ENSMUST00000052965 Mfap1aC0HKD8 439 aaKnown RBP13.32□□□□□ -0.28
Nipbl-201ENSMUST00000052965 Mfap1bC0HKD9 439 aaKnown RBP13.32□□□□□ -0.28
Nipbl-201ENSMUST00000052965 Kif3aP28741 701 aa13.32□□□□□ -0.28
Nipbl-201ENSMUST00000052965 CftrP26361 1476 aa13.32□□□□□ -0.28
Nipbl-201ENSMUST00000052965 Pde3bQ61409 1100 aa13.31□□□□□ -0.28
Nipbl-201ENSMUST00000052965 AampJ3QN89 436 aa13.31□□□□□ -0.28
Nipbl-201ENSMUST00000052965 Gpatch11Q3UFS4 262 aa13.31□□□□□ -0.28
Nipbl-201ENSMUST00000052965 ScribQ80U72 1612 aa13.31□□□□□ -0.28
Nipbl-201ENSMUST00000052965 Stag3O70576 1240 aa13.3□□□□□ -0.28
Nipbl-201ENSMUST00000052965 Anp32eP97822 260 aaKnown RBP13.3□□□□□ -0.28
Nipbl-201ENSMUST00000052965 R3hcc1Q8BSI6 488 aa13.3□□□□□ -0.28
Nipbl-201ENSMUST00000052965 Plekhh2Q8C115 1491 aa13.3□□□□□ -0.28
Nipbl-201ENSMUST00000052965 Pkd2O35245 966 aa13.29□□□□□ -0.28
Nipbl-201ENSMUST00000052965 Kif20aP97329 887 aa13.29□□□□□ -0.28
Nipbl-201ENSMUST00000052965 Cwc15Q9JHS9 229 aaKnown RBP13.29□□□□□ -0.28
Nipbl-201ENSMUST00000052965 Cux1P53564 1515 aa13.29□□□□□ -0.28
Nipbl-201ENSMUST00000052965 Ralbp1Q62172 648 aa13.29□□□□□ -0.28
Nipbl-201ENSMUST00000052965 Ccdc173A0JLY1 547 aa13.28□□□□□ -0.28
Nipbl-201ENSMUST00000052965 Rundc1Q0VDN7 615 aa13.28□□□□□ -0.28
Nipbl-201ENSMUST00000052965 Pes1Q9EQ61 584 aaKnown RBP13.28□□□□□ -0.28
Nipbl-201ENSMUST00000052965 Rapgef2Q8CHG7 1496 aa13.27□□□□□ -0.28
Nipbl-201ENSMUST00000052965 Mrvi1Q9WUX5 899 aaKnown RBP13.27□□□□□ -0.29
Nipbl-201ENSMUST00000052965 Znf710Q3U288 666 aa13.26□□□□□ -0.29
Nipbl-201ENSMUST00000052965 UacaQ8CGB3 1411 aa13.26□□□□□ -0.29
Nipbl-201ENSMUST00000052965 Ccdc34Q3UI66 367 aa13.26□□□□□ -0.29
Nipbl-201ENSMUST00000052965 EzrP26040 586 aaKnown RBP13.26□□□□□ -0.29
Nipbl-201ENSMUST00000052965 IbspQ61711 324 aa13.25□□□□□ -0.29
Nipbl-201ENSMUST00000052965 Zrsr2Q62377 462 aaKnown RBP13.25□□□□□ -0.29
Nipbl-201ENSMUST00000052965 Aebp1Q640N1 1128 aa13.25□□□□□ -0.29
Nipbl-201ENSMUST00000052965 Plppr3Q7TPB0 716 aa13.24□□□□□ -0.29
Nipbl-201ENSMUST00000052965 Rabep1O35551 862 aa13.24□□□□□ -0.29
Nipbl-201ENSMUST00000052965 Speer4f1Q9D5Q6 258 aa13.24□□□□□ -0.29
Nipbl-201ENSMUST00000052965 St18Q80TY4 1045 aa13.24□□□□□ -0.29
Nipbl-201ENSMUST00000052965 Ankrd36D3Z4K0 1415 aa13.23□□□□□ -0.29
Nipbl-201ENSMUST00000052965 Kif16bB1AVY7 1312 aa13.23□□□□□ -0.29
Nipbl-201ENSMUST00000052965 Mphosph9A6H5Y1 991 aa13.23□□□□□ -0.29
Nipbl-201ENSMUST00000052965 Gripap1Q8VD04 806 aa13.23□□□□□ -0.29
Nipbl-201ENSMUST00000052965 Dhx57Q6P5D3 1388 aaKnown RBP13.23□□□□□ -0.29
Nipbl-201ENSMUST00000052965 Prkrip1Q9CWV6 186 aaKnown RBP13.22□□□□□ -0.29
Nipbl-201ENSMUST00000052965 Tpm3-rs7D3Z2H9 248 aa13.22□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 59.8 ms