RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Fhad1A6PWD2 1420 aa23,81■■□□□ 1,4
Scaf11-201ENSMUST00000047835 Dhx57Q6P5D3 1388 aaKnown RBP23,8■■□□□ 1,4
Scaf11-201ENSMUST00000047835 Sox12Q04890 314 aa23,79■■□□□ 1,4
Scaf11-201ENSMUST00000047835 Znf316Q6PGE4 1016 aa23,78■■□□□ 1,4
Scaf11-201ENSMUST00000047835 Ythdc1E9Q5K9 736 aaKnown RBP23,78■■□□□ 1,4
Scaf11-201ENSMUST00000047835 Dhx29Q6PGC1 1365 aaKnown RBP23,77■■□□□ 1,4
Scaf11-201ENSMUST00000047835 Sart1Q9Z315 806 aaKnown RBP23,76■■□□□ 1,39
Scaf11-201ENSMUST00000047835 NudcO35685 332 aaKnown RBP23,76■■□□□ 1,39
Scaf11-201ENSMUST00000047835 Ccnb3Q810T2 1396 aa23,76■■□□□ 1,39
Scaf11-201ENSMUST00000047835 Plekhh2Q8C115 1491 aa23,74■■□□□ 1,39
Scaf11-201ENSMUST00000047835 Tmf1B9EKI3 1091 aa23,74■■□□□ 1,39
Scaf11-201ENSMUST00000047835 Exoc6Q8R313 802 aa23,72■■□□□ 1,39
Scaf11-201ENSMUST00000047835 Birc3O08863 600 aa23,71■■□□□ 1,39
Scaf11-201ENSMUST00000047835 U2surpQ6NV83 1029 aaKnown RBP23,7■■□□□ 1,38
Scaf11-201ENSMUST00000047835 B4galnt3Q6L8S8 986 aa23,69■■□□□ 1,38
Scaf11-201ENSMUST00000047835 Dcaf11Q91VU6 549 aa23,69■■□□□ 1,38
Scaf11-201ENSMUST00000047835 Cttnbp2B9EJA2 1648 aa23,69■■□□□ 1,38
Scaf11-201ENSMUST00000047835 Ggt6Q6PDE7 497 aa23,69■■□□□ 1,38
Scaf11-201ENSMUST00000047835 Speer4f1Q9D5Q6 258 aa23,68■■□□□ 1,38
Scaf11-201ENSMUST00000047835 Zfp777B9EKF4 885 aa23,67■■□□□ 1,38
Scaf11-201ENSMUST00000047835 Rock2P70336 1388 aa23,66■■□□□ 1,38
Scaf11-201ENSMUST00000047835 WrnO09053 1401 aa23,65■■□□□ 1,38
Scaf11-201ENSMUST00000047835 U2af1Q9D883 239 aaKnown RBP23,65■■□□□ 1,38
Scaf11-201ENSMUST00000047835 Iqgap2Q3UQ44 1575 aa23,65■■□□□ 1,38
Scaf11-201ENSMUST00000047835 Rtf1A2AQ19 715 aaKnown RBP23,64■■□□□ 1,38
Scaf11-201ENSMUST00000047835 Fan1Q69ZT1 1020 aa23,62■■□□□ 1,37
Scaf11-201ENSMUST00000047835 Senp3Q9EP97 568 aaKnown RBP23,62■■□□□ 1,37
Scaf11-201ENSMUST00000047835 Clstn1Q9EPL2 979 aa23,62■■□□□ 1,37
Scaf11-201ENSMUST00000047835 Znf326O88291 580 aa23,62■■□□□ 1,37
Scaf11-201ENSMUST00000047835 Srcin1Q9QWI6 1250 aa23,61■■□□□ 1,37
Scaf11-201ENSMUST00000047835 Rwdd1Q9CQK7 243 aa23,61■■□□□ 1,37
Scaf11-201ENSMUST00000047835 Slc4a3P16283 1227 aa23,6■■□□□ 1,37
Scaf11-201ENSMUST00000047835 Pabpn1Q8CCS6 302 aaKnown RBP23,6■■□□□ 1,37
Scaf11-201ENSMUST00000047835 Fam71e1A1L3C1 212 aa23,59■■□□□ 1,37
Scaf11-201ENSMUST00000047835 Chmp4bQ9D8B3 224 aaKnown RBP23,59■■□□□ 1,37
Scaf11-201ENSMUST00000047835 SafbD3YXK2 937 aaKnown RBP23,57■■□□□ 1,36
Scaf11-201ENSMUST00000047835 Tnnt1O88346 262 aa23,57■■□□□ 1,36
Scaf11-201ENSMUST00000047835 Map7O88735 730 aa23,54■■□□□ 1,36
Scaf11-201ENSMUST00000047835 Zscan21Q07231 555 aa23,53■■□□□ 1,36
Scaf11-201ENSMUST00000047835 1700123L14RikQ3V2K7 440 aa23,53■■□□□ 1,36
Scaf11-201ENSMUST00000047835 Slc4a1apE9PX68 744 aa23,53■■□□□ 1,36
Scaf11-201ENSMUST00000047835 Hsp90b1P08113 802 aaKnown RBP23,53■■□□□ 1,36
Scaf11-201ENSMUST00000047835 Soga1E1U8D0 1418 aa23,52■■□□□ 1,36
Scaf11-201ENSMUST00000047835 Plcb2A3KGF7 1181 aa23,52■■□□□ 1,36
Scaf11-201ENSMUST00000047835 Tmco5bQ80X59 307 aa23,52■■□□□ 1,36
Scaf11-201ENSMUST00000047835 Golga2Q921M4 999 aa23,51■■□□□ 1,35
Scaf11-201ENSMUST00000047835 Utp14aQ640M1 767 aaKnown RBP23,5■■□□□ 1,35
Scaf11-201ENSMUST00000047835 Q8BT18 775 aa23,49■■□□□ 1,35
Scaf11-201ENSMUST00000047835 Jph4Q80WT0 628 aa23,48■■□□□ 1,35
Scaf11-201ENSMUST00000047835 Pes1Q9EQ61 584 aaKnown RBP23,47■■□□□ 1,35
Scaf11-201ENSMUST00000047835 Cc2d2bA0A286YDU8 1405 aa23,47■■□□□ 1,35
Scaf11-201ENSMUST00000047835 Znf330Q922H9 316 aa23,46■■□□□ 1,35
Scaf11-201ENSMUST00000047835 CrbnQ8C7D2 445 aa23,45■■□□□ 1,35
Scaf11-201ENSMUST00000047835 PtmaP26350 111 aa23,45■■□□□ 1,34
Scaf11-201ENSMUST00000047835 Q3TQI7 289 aaKnown RBP23,45■■□□□ 1,34
Scaf11-201ENSMUST00000047835 Spag9Q58A65 1321 aaKnown RBP23,45■■□□□ 1,34
Scaf11-201ENSMUST00000047835 Usp47Q8BY87 1376 aa23,45■■□□□ 1,34
Scaf11-201ENSMUST00000047835 Mak16Q8BGS0 296 aaKnown RBP23,45■■□□□ 1,34
Scaf11-201ENSMUST00000047835 UacaQ8CGB3 1411 aa23,44■■□□□ 1,34
Scaf11-201ENSMUST00000047835 Tdrd9Q14BI7 1383 aa23,43■■□□□ 1,34
Scaf11-201ENSMUST00000047835 CenpjQ569L8 1344 aa23,41■■□□□ 1,34
Scaf11-201ENSMUST00000047835 Rsph4aQ8BYM7 716 aa23,41■■□□□ 1,34
Scaf11-201ENSMUST00000047835 Pibf1E9Q6K3 756 aa23,41■■□□□ 1,34
Scaf11-201ENSMUST00000047835 Trim44Q9QXA7 346 aa23,4■■□□□ 1,34
Scaf11-201ENSMUST00000047835 CatipB9EKE5 520 aa23,39■■□□□ 1,33
Scaf11-201ENSMUST00000047835 Ppm1gQ61074 542 aa23,39■■□□□ 1,33
Scaf11-201ENSMUST00000047835 Rad54l2Q99NG0 1466 aa23,39■■□□□ 1,33
Scaf11-201ENSMUST00000047835 Shq1Q7TMX5 569 aa23,39■■□□□ 1,33
Scaf11-201ENSMUST00000047835 Sh3bp5Q9Z131 463 aa23,38■■□□□ 1,33
Scaf11-201ENSMUST00000047835 Mbd3Q9Z2D8 285 aaKnown RBP23,38■■□□□ 1,33
Scaf11-201ENSMUST00000047835 KnstrnQ9D9Z1 312 aaKnown RBP23,37■■□□□ 1,33
Scaf11-201ENSMUST00000047835 Pank3Q8R2W9 370 aa23,37■■□□□ 1,33
Scaf11-201ENSMUST00000047835 HnrnpuQ8VEK3 800 aaKnown RBP23,37■■□□□ 1,33
Scaf11-201ENSMUST00000047835 Cluap1Q8R3P7 413 aa23,36■■□□□ 1,33
Scaf11-201ENSMUST00000047835 Ap3b2Q9JME5 1082 aa23,35■■□□□ 1,33
Scaf11-201ENSMUST00000047835 Supt16hQ920B9 1047 aa23,34■■□□□ 1,33
Scaf11-201ENSMUST00000047835 Cc2d2aQ8CFW7 1633 aa23,34■■□□□ 1,33
Scaf11-201ENSMUST00000047835 Usp40Q8BWR4 1235 aa23,34■■□□□ 1,33
Scaf11-201ENSMUST00000047835 Shroom4Q1W617 1475 aa23,34■■□□□ 1,33
Scaf11-201ENSMUST00000047835 Ncoa2Q61026 1462 aa23,33■■□□□ 1,33
Scaf11-201ENSMUST00000047835 HdgfP51859 237 aaKnown RBP23,33■■□□□ 1,33
Scaf11-201ENSMUST00000047835 Urb2E9Q7L1 1524 aaKnown RBP23,32■■□□□ 1,32
Scaf11-201ENSMUST00000047835 Ksr2Q3UVC0 959 aa23,32■■□□□ 1,32
Scaf11-201ENSMUST00000047835 Lmod3E9QA62 571 aa23,32■■□□□ 1,32
Scaf11-201ENSMUST00000047835 Htatsf1Q8BGC0 757 aa23,31■■□□□ 1,32
Scaf11-201ENSMUST00000047835 Chmp5Q9D7S9 219 aa23,3■■□□□ 1,32
Scaf11-201ENSMUST00000047835 Mink1Q9JM52 1308 aa23,3■■□□□ 1,32
Scaf11-201ENSMUST00000047835 Spryd3E9Q9B3 442 aa23,3■■□□□ 1,32
Scaf11-201ENSMUST00000047835 Stard8Q8K031 1019 aa23,3■■□□□ 1,32
Scaf11-201ENSMUST00000047835 Sart3Q9JLI8 962 aaKnown RBP23,29■■□□□ 1,32
Scaf11-201ENSMUST00000047835 Inpp5dQ9ES52 1191 aa23,29■■□□□ 1,32
Scaf11-201ENSMUST00000047835 Rassf8Q8CJ96 419 aa23,28■■□□□ 1,32
Scaf11-201ENSMUST00000047835 Tsen2Q6P7W5 460 aa23,27■■□□□ 1,32
Scaf11-201ENSMUST00000047835 Eif4g2Q62448 906 aaKnown RBP23,26■■□□□ 1,31
Scaf11-201ENSMUST00000047835 Cabp4Q8VHC5 271 aa23,26■■□□□ 1,31
Scaf11-201ENSMUST00000047835 Pak3Q61036 559 aa23,26■■□□□ 1,31
Scaf11-201ENSMUST00000047835 MccE9PWI3 1003 aa23,25■■□□□ 1,31
Scaf11-201ENSMUST00000047835 Efcab5A0JP43 1406 aa23,25■■□□□ 1,31
Scaf11-201ENSMUST00000047835 Nol10Q5RJG1 687 aaKnown RBP23,25■■□□□ 1,31
Scaf11-201ENSMUST00000047835 Tcerg1Q8CGF7 1100 aaKnown RBP23,23■■□□□ 1,31
Retrieved 100 of 22,080 RNA–protein pairs in 18,3 ms