RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Fhad1A6PWD2 1420 aa23.81■■□□□ 1.4
Scaf11-201ENSMUST00000047835 Dhx57Q6P5D3 1388 aaKnown RBP23.8■■□□□ 1.4
Scaf11-201ENSMUST00000047835 Sox12Q04890 314 aa23.79■■□□□ 1.4
Scaf11-201ENSMUST00000047835 Znf316Q6PGE4 1016 aa23.78■■□□□ 1.4
Scaf11-201ENSMUST00000047835 Ythdc1E9Q5K9 736 aaKnown RBP23.78■■□□□ 1.4
Scaf11-201ENSMUST00000047835 Dhx29Q6PGC1 1365 aaKnown RBP23.77■■□□□ 1.4
Scaf11-201ENSMUST00000047835 Sart1Q9Z315 806 aaKnown RBP23.76■■□□□ 1.39
Scaf11-201ENSMUST00000047835 NudcO35685 332 aaKnown RBP23.76■■□□□ 1.39
Scaf11-201ENSMUST00000047835 Ccnb3Q810T2 1396 aa23.76■■□□□ 1.39
Scaf11-201ENSMUST00000047835 Plekhh2Q8C115 1491 aa23.74■■□□□ 1.39
Scaf11-201ENSMUST00000047835 Tmf1B9EKI3 1091 aa23.74■■□□□ 1.39
Scaf11-201ENSMUST00000047835 Exoc6Q8R313 802 aa23.72■■□□□ 1.39
Scaf11-201ENSMUST00000047835 Birc3O08863 600 aa23.71■■□□□ 1.39
Scaf11-201ENSMUST00000047835 U2surpQ6NV83 1029 aaKnown RBP23.7■■□□□ 1.38
Scaf11-201ENSMUST00000047835 B4galnt3Q6L8S8 986 aa23.69■■□□□ 1.38
Scaf11-201ENSMUST00000047835 Dcaf11Q91VU6 549 aa23.69■■□□□ 1.38
Scaf11-201ENSMUST00000047835 Cttnbp2B9EJA2 1648 aa23.69■■□□□ 1.38
Scaf11-201ENSMUST00000047835 Ggt6Q6PDE7 497 aa23.69■■□□□ 1.38
Scaf11-201ENSMUST00000047835 Speer4f1Q9D5Q6 258 aa23.68■■□□□ 1.38
Scaf11-201ENSMUST00000047835 Zfp777B9EKF4 885 aa23.67■■□□□ 1.38
Scaf11-201ENSMUST00000047835 Rock2P70336 1388 aa23.66■■□□□ 1.38
Scaf11-201ENSMUST00000047835 WrnO09053 1401 aa23.65■■□□□ 1.38
Scaf11-201ENSMUST00000047835 U2af1Q9D883 239 aaKnown RBP23.65■■□□□ 1.38
Scaf11-201ENSMUST00000047835 Iqgap2Q3UQ44 1575 aa23.65■■□□□ 1.38
Scaf11-201ENSMUST00000047835 Rtf1A2AQ19 715 aaKnown RBP23.64■■□□□ 1.38
Scaf11-201ENSMUST00000047835 Fan1Q69ZT1 1020 aa23.62■■□□□ 1.37
Scaf11-201ENSMUST00000047835 Senp3Q9EP97 568 aaKnown RBP23.62■■□□□ 1.37
Scaf11-201ENSMUST00000047835 Clstn1Q9EPL2 979 aa23.62■■□□□ 1.37
Scaf11-201ENSMUST00000047835 Znf326O88291 580 aa23.62■■□□□ 1.37
Scaf11-201ENSMUST00000047835 Srcin1Q9QWI6 1250 aa23.61■■□□□ 1.37
Scaf11-201ENSMUST00000047835 Rwdd1Q9CQK7 243 aa23.61■■□□□ 1.37
Scaf11-201ENSMUST00000047835 Slc4a3P16283 1227 aa23.6■■□□□ 1.37
Scaf11-201ENSMUST00000047835 Pabpn1Q8CCS6 302 aaKnown RBP23.6■■□□□ 1.37
Scaf11-201ENSMUST00000047835 Fam71e1A1L3C1 212 aa23.59■■□□□ 1.37
Scaf11-201ENSMUST00000047835 Chmp4bQ9D8B3 224 aaKnown RBP23.59■■□□□ 1.37
Scaf11-201ENSMUST00000047835 SafbD3YXK2 937 aaKnown RBP23.57■■□□□ 1.36
Scaf11-201ENSMUST00000047835 Tnnt1O88346 262 aa23.57■■□□□ 1.36
Scaf11-201ENSMUST00000047835 Map7O88735 730 aa23.54■■□□□ 1.36
Scaf11-201ENSMUST00000047835 Zscan21Q07231 555 aa23.53■■□□□ 1.36
Scaf11-201ENSMUST00000047835 1700123L14RikQ3V2K7 440 aa23.53■■□□□ 1.36
Scaf11-201ENSMUST00000047835 Slc4a1apE9PX68 744 aa23.53■■□□□ 1.36
Scaf11-201ENSMUST00000047835 Hsp90b1P08113 802 aaKnown RBP23.53■■□□□ 1.36
Scaf11-201ENSMUST00000047835 Soga1E1U8D0 1418 aa23.52■■□□□ 1.36
Scaf11-201ENSMUST00000047835 Plcb2A3KGF7 1181 aa23.52■■□□□ 1.36
Scaf11-201ENSMUST00000047835 Tmco5bQ80X59 307 aa23.52■■□□□ 1.36
Scaf11-201ENSMUST00000047835 Golga2Q921M4 999 aa23.51■■□□□ 1.35
Scaf11-201ENSMUST00000047835 Utp14aQ640M1 767 aaKnown RBP23.5■■□□□ 1.35
Scaf11-201ENSMUST00000047835 Q8BT18 775 aa23.49■■□□□ 1.35
Scaf11-201ENSMUST00000047835 Jph4Q80WT0 628 aa23.48■■□□□ 1.35
Scaf11-201ENSMUST00000047835 Pes1Q9EQ61 584 aaKnown RBP23.47■■□□□ 1.35
Scaf11-201ENSMUST00000047835 Cc2d2bA0A286YDU8 1405 aa23.47■■□□□ 1.35
Scaf11-201ENSMUST00000047835 Znf330Q922H9 316 aa23.46■■□□□ 1.35
Scaf11-201ENSMUST00000047835 CrbnQ8C7D2 445 aa23.45■■□□□ 1.35
Scaf11-201ENSMUST00000047835 PtmaP26350 111 aa23.45■■□□□ 1.34
Scaf11-201ENSMUST00000047835 Q3TQI7 289 aaKnown RBP23.45■■□□□ 1.34
Scaf11-201ENSMUST00000047835 Spag9Q58A65 1321 aaKnown RBP23.45■■□□□ 1.34
Scaf11-201ENSMUST00000047835 Usp47Q8BY87 1376 aa23.45■■□□□ 1.34
Scaf11-201ENSMUST00000047835 Mak16Q8BGS0 296 aaKnown RBP23.45■■□□□ 1.34
Scaf11-201ENSMUST00000047835 UacaQ8CGB3 1411 aa23.44■■□□□ 1.34
Scaf11-201ENSMUST00000047835 Tdrd9Q14BI7 1383 aa23.43■■□□□ 1.34
Scaf11-201ENSMUST00000047835 CenpjQ569L8 1344 aa23.41■■□□□ 1.34
Scaf11-201ENSMUST00000047835 Rsph4aQ8BYM7 716 aa23.41■■□□□ 1.34
Scaf11-201ENSMUST00000047835 Pibf1E9Q6K3 756 aa23.41■■□□□ 1.34
Scaf11-201ENSMUST00000047835 Trim44Q9QXA7 346 aa23.4■■□□□ 1.34
Scaf11-201ENSMUST00000047835 CatipB9EKE5 520 aa23.39■■□□□ 1.33
Scaf11-201ENSMUST00000047835 Ppm1gQ61074 542 aa23.39■■□□□ 1.33
Scaf11-201ENSMUST00000047835 Rad54l2Q99NG0 1466 aa23.39■■□□□ 1.33
Scaf11-201ENSMUST00000047835 Shq1Q7TMX5 569 aa23.39■■□□□ 1.33
Scaf11-201ENSMUST00000047835 Sh3bp5Q9Z131 463 aa23.38■■□□□ 1.33
Scaf11-201ENSMUST00000047835 Mbd3Q9Z2D8 285 aaKnown RBP23.38■■□□□ 1.33
Scaf11-201ENSMUST00000047835 KnstrnQ9D9Z1 312 aaKnown RBP23.37■■□□□ 1.33
Scaf11-201ENSMUST00000047835 Pank3Q8R2W9 370 aa23.37■■□□□ 1.33
Scaf11-201ENSMUST00000047835 HnrnpuQ8VEK3 800 aaKnown RBP23.37■■□□□ 1.33
Scaf11-201ENSMUST00000047835 Cluap1Q8R3P7 413 aa23.36■■□□□ 1.33
Scaf11-201ENSMUST00000047835 Ap3b2Q9JME5 1082 aa23.35■■□□□ 1.33
Scaf11-201ENSMUST00000047835 Supt16hQ920B9 1047 aa23.34■■□□□ 1.33
Scaf11-201ENSMUST00000047835 Cc2d2aQ8CFW7 1633 aa23.34■■□□□ 1.33
Scaf11-201ENSMUST00000047835 Usp40Q8BWR4 1235 aa23.34■■□□□ 1.33
Scaf11-201ENSMUST00000047835 Shroom4Q1W617 1475 aa23.34■■□□□ 1.33
Scaf11-201ENSMUST00000047835 Ncoa2Q61026 1462 aa23.33■■□□□ 1.33
Scaf11-201ENSMUST00000047835 HdgfP51859 237 aaKnown RBP23.33■■□□□ 1.33
Scaf11-201ENSMUST00000047835 Urb2E9Q7L1 1524 aaKnown RBP23.32■■□□□ 1.32
Scaf11-201ENSMUST00000047835 Ksr2Q3UVC0 959 aa23.32■■□□□ 1.32
Scaf11-201ENSMUST00000047835 Lmod3E9QA62 571 aa23.32■■□□□ 1.32
Scaf11-201ENSMUST00000047835 Htatsf1Q8BGC0 757 aa23.31■■□□□ 1.32
Scaf11-201ENSMUST00000047835 Chmp5Q9D7S9 219 aa23.3■■□□□ 1.32
Scaf11-201ENSMUST00000047835 Mink1Q9JM52 1308 aa23.3■■□□□ 1.32
Scaf11-201ENSMUST00000047835 Spryd3E9Q9B3 442 aa23.3■■□□□ 1.32
Scaf11-201ENSMUST00000047835 Stard8Q8K031 1019 aa23.3■■□□□ 1.32
Scaf11-201ENSMUST00000047835 Sart3Q9JLI8 962 aaKnown RBP23.29■■□□□ 1.32
Scaf11-201ENSMUST00000047835 Inpp5dQ9ES52 1191 aa23.29■■□□□ 1.32
Scaf11-201ENSMUST00000047835 Rassf8Q8CJ96 419 aa23.28■■□□□ 1.32
Scaf11-201ENSMUST00000047835 Tsen2Q6P7W5 460 aa23.27■■□□□ 1.32
Scaf11-201ENSMUST00000047835 Eif4g2Q62448 906 aaKnown RBP23.26■■□□□ 1.31
Scaf11-201ENSMUST00000047835 Cabp4Q8VHC5 271 aa23.26■■□□□ 1.31
Scaf11-201ENSMUST00000047835 Pak3Q61036 559 aa23.26■■□□□ 1.31
Scaf11-201ENSMUST00000047835 MccE9PWI3 1003 aa23.25■■□□□ 1.31
Scaf11-201ENSMUST00000047835 Efcab5A0JP43 1406 aa23.25■■□□□ 1.31
Scaf11-201ENSMUST00000047835 Nol10Q5RJG1 687 aaKnown RBP23.25■■□□□ 1.31
Scaf11-201ENSMUST00000047835 Tcerg1Q8CGF7 1100 aaKnown RBP23.23■■□□□ 1.31
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms