RNA–Protein interactions for RNA: ENSMUST00000042617.13

Clcnka-201, Transcript of Chloride channel protein ClC-Ka, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clcnka, Length 2,428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcnka-201ENSMUST00000042617 Gm1043A0A140LJC2 1431 aa20.03■□□□□ 0.8
Clcnka-201ENSMUST00000042617 Fhad1A6PWD2 1420 aa20.03■□□□□ 0.8
Clcnka-201ENSMUST00000042617 Wdr43Q6ZQL4 677 aaKnown RBP20.02■□□□□ 0.79
Clcnka-201ENSMUST00000042617 Zcchc11B2RX14 1644 aaKnown RBP20.02■□□□□ 0.79
Clcnka-201ENSMUST00000042617 3425401B19RikD3Z1D3 1412 aa20.01■□□□□ 0.79
Clcnka-201ENSMUST00000042617 Hspa5P20029 655 aaKnown RBP19.98■□□□□ 0.79
Clcnka-201ENSMUST00000042617 Ppp4r2Q0VGB7 417 aa19.98■□□□□ 0.79
Clcnka-201ENSMUST00000042617 Mia2Q91ZV0 1396 aa19.97■□□□□ 0.79
Clcnka-201ENSMUST00000042617 Vps8Q0P5W1 1427 aa19.96■□□□□ 0.79
Clcnka-201ENSMUST00000042617 Kif27Q7M6Z4 1394 aa19.94■□□□□ 0.78
Clcnka-201ENSMUST00000042617 Abcc1O35379 1528 aa19.94■□□□□ 0.78
Clcnka-201ENSMUST00000042617 Chd1P40201 1711 aa19.93■□□□□ 0.78
Clcnka-201ENSMUST00000042617 Fkbp15Q6P9Q6 1216 aaKnown RBP19.92■□□□□ 0.78
Clcnka-201ENSMUST00000042617 Jph4Q80WT0 628 aa19.91■□□□□ 0.78
Clcnka-201ENSMUST00000042617 Pabpn1Q8CCS6 302 aaKnown RBP19.9■□□□□ 0.78
Clcnka-201ENSMUST00000042617 Arhgef12Q8R4H2 1543 aaKnown RBP19.9■□□□□ 0.78
Clcnka-201ENSMUST00000042617 Arhgap31A6X8Z5 1425 aa19.88■□□□□ 0.77
Clcnka-201ENSMUST00000042617 Naip5Q9R016 1403 aa19.88■□□□□ 0.77
Clcnka-201ENSMUST00000042617 Ccnb3Q810T2 1396 aa19.85■□□□□ 0.77
Clcnka-201ENSMUST00000042617 Gm14025A2AP89 1413 aa19.85■□□□□ 0.77
Clcnka-201ENSMUST00000042617 Rapgef6Q5NCJ1 1609 aa19.85■□□□□ 0.77
Clcnka-201ENSMUST00000042617 Liat1Q810M6 228 aa19.85■□□□□ 0.77
Clcnka-201ENSMUST00000042617 Cul7Q8VE73 1689 aa19.84■□□□□ 0.77
Clcnka-201ENSMUST00000042617 Slc24a1Q91WD8 1130 aa19.84■□□□□ 0.77
Clcnka-201ENSMUST00000042617 Pprc1Q6NZN1 1644 aa19.83■□□□□ 0.77
Clcnka-201ENSMUST00000042617 Lmtk2Q3TYD6 1471 aa19.83■□□□□ 0.76
Clcnka-201ENSMUST00000042617 Sin3aQ60520 1274 aaKnown RBP19.83■□□□□ 0.76
Clcnka-201ENSMUST00000042617 Naip2Q9QUK4 1447 aa19.82■□□□□ 0.76
Clcnka-201ENSMUST00000042617 Ncoa3O09000 1398 aa19.81■□□□□ 0.76
Clcnka-201ENSMUST00000042617 Pak3Q61036 559 aa19.81■□□□□ 0.76
Clcnka-201ENSMUST00000042617 Mroh2aD3Z750 1679 aa19.81■□□□□ 0.76
Clcnka-201ENSMUST00000042617 Ccdc27Q3V036 639 aa19.8■□□□□ 0.76
Clcnka-201ENSMUST00000042617 A2mQ6GQT1 1474 aa19.8■□□□□ 0.76
Clcnka-201ENSMUST00000042617 Ythdc2B2RR83 1445 aaKnown RBP19.79■□□□□ 0.76
Clcnka-201ENSMUST00000042617 Upf2A2AT37 1269 aaKnown RBP19.78■□□□□ 0.76
Clcnka-201ENSMUST00000042617 Egfem1Q8C088 590 aa19.78■□□□□ 0.76
Clcnka-201ENSMUST00000042617 Hdac5Q9Z2V6 1113 aa19.78■□□□□ 0.76
Clcnka-201ENSMUST00000042617 Ccdc141E9Q8Q6 1531 aa19.78■□□□□ 0.76
Clcnka-201ENSMUST00000042617 NexmifQ5DTT1 1515 aa19.78■□□□□ 0.76
Clcnka-201ENSMUST00000042617 Arhgef11Q68FM7 1552 aa19.77■□□□□ 0.76
Clcnka-201ENSMUST00000042617 Col17a1Q07563 1470 aa19.77■□□□□ 0.76
Clcnka-201ENSMUST00000042617 PtprtQ99M80 1454 aa19.77■□□□□ 0.76
Clcnka-201ENSMUST00000042617 Gapvd1Q6PAR5 1458 aa19.77■□□□□ 0.75
Clcnka-201ENSMUST00000042617 Eif5bQ05D44 1216 aaKnown RBP19.76■□□□□ 0.75
Clcnka-201ENSMUST00000042617 Rrbp1Q99PL5 1605 aaKnown RBP19.75■□□□□ 0.75
Clcnka-201ENSMUST00000042617 Mug1P28665 1476 aa19.75■□□□□ 0.75
Clcnka-201ENSMUST00000042617 Gcc2Q8CHG3 1679 aa19.75■□□□□ 0.75
Clcnka-201ENSMUST00000042617 Fhod3Q76LL6 1578 aa19.74■□□□□ 0.75
Clcnka-201ENSMUST00000042617 Chic2Q9D9G3 165 aa19.74■□□□□ 0.75
Clcnka-201ENSMUST00000042617 Ccdc9Q8VC31 543 aaKnown RBP19.72■□□□□ 0.75
Clcnka-201ENSMUST00000042617 Mrs2Q5NCE8 434 aa19.7■□□□□ 0.74
Clcnka-201ENSMUST00000042617 Cep170Q6A065 1588 aa19.7■□□□□ 0.74
Clcnka-201ENSMUST00000042617 Slc4a2P13808 1237 aaKnown RBP19.7■□□□□ 0.74
Clcnka-201ENSMUST00000042617 Cdc42bpaQ3UU96 1719 aa19.69■□□□□ 0.74
Clcnka-201ENSMUST00000042617 Gm13695A2AK44 830 aa19.69■□□□□ 0.74
Clcnka-201ENSMUST00000042617 Magi1Q6RHR9 1471 aa19.69■□□□□ 0.74
Clcnka-201ENSMUST00000042617 Prex2Q3LAC4 1598 aa19.69■□□□□ 0.74
Clcnka-201ENSMUST00000042617 Dennd4bQ3U1Y4 1499 aa19.68■□□□□ 0.74
Clcnka-201ENSMUST00000042617 Ube2uB1AUC4 352 aa19.67■□□□□ 0.74
Clcnka-201ENSMUST00000042617 Ncoa1P70365 1447 aa19.67■□□□□ 0.74
Clcnka-201ENSMUST00000042617 Ipo9Q91YE6 1041 aa19.66■□□□□ 0.74
Clcnka-201ENSMUST00000042617 Kiaa1551Q5DTW7 1521 aa19.64■□□□□ 0.73
Clcnka-201ENSMUST00000042617 Znf608Q56A10 1511 aa19.63■□□□□ 0.73
Clcnka-201ENSMUST00000042617 Gm156Q58A37 223 aa19.62■□□□□ 0.73
Clcnka-201ENSMUST00000042617 Amer1Q7TS75 1132 aa19.61■□□□□ 0.73
Clcnka-201ENSMUST00000042617 NrdcQ8BHG1 1161 aa19.61■□□□□ 0.73
Clcnka-201ENSMUST00000042617 Fancd2Q80V62 1450 aa19.6■□□□□ 0.73
Clcnka-201ENSMUST00000042617 P3h3Q8CG70 732 aa19.6■□□□□ 0.73
Clcnka-201ENSMUST00000042617 NhsB1AV60 1647 aa19.59■□□□□ 0.73
Clcnka-201ENSMUST00000042617 Fam163aQ8CAA5 168 aa19.59■□□□□ 0.73
Clcnka-201ENSMUST00000042617 Setbp1Q9Z180 1582 aa19.58■□□□□ 0.72
Clcnka-201ENSMUST00000042617 PnisrA2AJT4 805 aaKnown RBP19.57■□□□□ 0.72
Clcnka-201ENSMUST00000042617 Mapkbp1Q6NS57 1503 aa19.57■□□□□ 0.72
Clcnka-201ENSMUST00000042617 Ttbk1Q6PCN3 1308 aa19.57■□□□□ 0.72
Clcnka-201ENSMUST00000042617 Arhgef40Q3UPH7 1517 aa19.57■□□□□ 0.72
Clcnka-201ENSMUST00000042617 Exoc6Q8R313 802 aa19.56■□□□□ 0.72
Clcnka-201ENSMUST00000042617 Cabp1Q9JLK7 227 aa19.56■□□□□ 0.72
Clcnka-201ENSMUST00000042617 Wwc2Q6NXJ0 1187 aa19.55■□□□□ 0.72
Clcnka-201ENSMUST00000042617 Gtf3c3Q3TMP1 882 aa19.55■□□□□ 0.72
Clcnka-201ENSMUST00000042617 Tcerg1Q8CGF7 1100 aaKnown RBP19.55■□□□□ 0.72
Clcnka-201ENSMUST00000042617 Abcc5Q9R1X5 1436 aa19.55■□□□□ 0.72
Clcnka-201ENSMUST00000042617 Kdm6bQ5NCY0 1641 aa19.53■□□□□ 0.72
Clcnka-201ENSMUST00000042617 AI481877A2ALV5 1481 aa19.53■□□□□ 0.72
Clcnka-201ENSMUST00000042617 Rfx7F8VPJ6 1459 aa19.53■□□□□ 0.72
Clcnka-201ENSMUST00000042617 Hsp90aa1P07901 733 aaKnown RBP19.53■□□□□ 0.72
Clcnka-201ENSMUST00000042617 Adcy10Q8C0T9 1614 aa19.53■□□□□ 0.72
Clcnka-201ENSMUST00000042617 Plekhh2Q8C115 1491 aa19.52■□□□□ 0.72
Clcnka-201ENSMUST00000042617 Lrrc9Q8CDN9 1456 aa19.52■□□□□ 0.72
Clcnka-201ENSMUST00000042617 Arid3cA6PWV5 409 aa19.52■□□□□ 0.72
Clcnka-201ENSMUST00000042617 Adgrl3Q80TS3 1537 aa19.52■□□□□ 0.72
Clcnka-201ENSMUST00000042617 Dhx57Q6P5D3 1388 aaKnown RBP19.52■□□□□ 0.71
Clcnka-201ENSMUST00000042617 Atp10dQ8K2X1 1416 aa19.51■□□□□ 0.71
Clcnka-201ENSMUST00000042617 Fam208aQ69ZR9 1610 aaKnown RBP19.5■□□□□ 0.71
Clcnka-201ENSMUST00000042617 Slc4a3P16283 1227 aa19.49■□□□□ 0.71
Clcnka-201ENSMUST00000042617 Irx3P81067 507 aa19.48■□□□□ 0.71
Clcnka-201ENSMUST00000042617 Igf1rQ60751 1373 aa19.48■□□□□ 0.71
Clcnka-201ENSMUST00000042617 Mtus2Q3UHD3 1353 aa19.47■□□□□ 0.71
Clcnka-201ENSMUST00000042617 Mphosph9A6H5Y1 991 aa19.46■□□□□ 0.71
Clcnka-201ENSMUST00000042617 Zfp644E9QA22 1323 aa19.46■□□□□ 0.71
Clcnka-201ENSMUST00000042617 Wdr7Q920I9 1489 aa19.46■□□□□ 0.71
Retrieved 100 of 22,080 RNA–protein pairs in 10.5 ms