RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Setbp1Q9Z180 1582 aa18.38■□□□□ 0.53
Nup88-201ENSMUST00000035283 Mug1P28665 1476 aa18.37■□□□□ 0.53
Nup88-201ENSMUST00000035283 Kif27Q7M6Z4 1394 aa18.37■□□□□ 0.53
Nup88-201ENSMUST00000035283 NexmifQ5DTT1 1515 aa18.37■□□□□ 0.53
Nup88-201ENSMUST00000035283 EprsQ8CGC7 1512 aaKnown RBP18.36■□□□□ 0.53
Nup88-201ENSMUST00000035283 PnisrA2AJT4 805 aaKnown RBP18.35■□□□□ 0.53
Nup88-201ENSMUST00000035283 Rprd2Q6NXI6 1469 aaKnown RBP18.34■□□□□ 0.53
Nup88-201ENSMUST00000035283 CadpsQ80TJ1 1355 aa18.34■□□□□ 0.53
Nup88-201ENSMUST00000035283 Slc4a3P16283 1227 aa18.33■□□□□ 0.53
Nup88-201ENSMUST00000035283 BC005561E9Q5E2 1589 aa18.33■□□□□ 0.53
Nup88-201ENSMUST00000035283 Egfem1Q8C088 590 aa18.31■□□□□ 0.52
Nup88-201ENSMUST00000035283 Ift140E9PY46 1464 aa18.3■□□□□ 0.52
Nup88-201ENSMUST00000035283 Gcc2Q8CHG3 1679 aa18.29■□□□□ 0.52
Nup88-201ENSMUST00000035283 Rfx7F8VPJ6 1459 aa18.29■□□□□ 0.52
Nup88-201ENSMUST00000035283 Pla2r1Q62028 1487 aa18.28■□□□□ 0.52
Nup88-201ENSMUST00000035283 Abcc5Q9R1X5 1436 aa18.28■□□□□ 0.52
Nup88-201ENSMUST00000035283 Disp1Q3TDN0 1521 aa18.27■□□□□ 0.51
Nup88-201ENSMUST00000035283 Abca5Q8K448 1642 aa18.26■□□□□ 0.51
Nup88-201ENSMUST00000035283 PrkcshO08795 521 aa18.26■□□□□ 0.51
Nup88-201ENSMUST00000035283 Kcnh8P59111 1102 aa18.26■□□□□ 0.51
Nup88-201ENSMUST00000035283 Ofd1Q80Z25 1017 aa18.24■□□□□ 0.51
Nup88-201ENSMUST00000035283 L3mbtl2P59178 703 aa18.22■□□□□ 0.51
Nup88-201ENSMUST00000035283 Rgl3Q3UYI5 709 aa18.21■□□□□ 0.51
Nup88-201ENSMUST00000035283 Plekhh2Q8C115 1491 aa18.21■□□□□ 0.51
Nup88-201ENSMUST00000035283 Pik3c2gO70167 1506 aa18.2■□□□□ 0.5
Nup88-201ENSMUST00000035283 Arhgef40Q3UPH7 1517 aa18.2■□□□□ 0.5
Nup88-201ENSMUST00000035283 Kif21aQ9QXL2 1672 aa18.19■□□□□ 0.5
Nup88-201ENSMUST00000035283 Magi3Q9EQJ9 1476 aa18.18■□□□□ 0.5
Nup88-201ENSMUST00000035283 Dhx9O70133 1380 aaKnown RBP18.18■□□□□ 0.5
Nup88-201ENSMUST00000035283 Plekhg5Q66T02 1073 aa18.17■□□□□ 0.5
Nup88-201ENSMUST00000035283 Dapk1Q80YE7 1442 aa18.17■□□□□ 0.5
Nup88-201ENSMUST00000035283 Rundc1Q0VDN7 615 aa18.17■□□□□ 0.5
Nup88-201ENSMUST00000035283 Ncoa3O09000 1398 aa18.17■□□□□ 0.5
Nup88-201ENSMUST00000035283 Kdm6bQ5NCY0 1641 aa18.16■□□□□ 0.5
Nup88-201ENSMUST00000035283 SphkapQ6NSW3 1687 aa18.16■□□□□ 0.5
Nup88-201ENSMUST00000035283 Arhgap27A2AB59 869 aa18.15■□□□□ 0.5
Nup88-201ENSMUST00000035283 Cwc22Q8C5N3 908 aaKnown RBP18.15■□□□□ 0.5
Nup88-201ENSMUST00000035283 WizO88286 1684 aaKnown RBP18.14■□□□□ 0.5
Nup88-201ENSMUST00000035283 Ttbk1Q6PCN3 1308 aa18.14■□□□□ 0.49
Nup88-201ENSMUST00000035283 Mtus2Q3UHD3 1353 aa18.14■□□□□ 0.49
Nup88-201ENSMUST00000035283 Adgrb2Q8CGM1 1561 aa18.12■□□□□ 0.49
Nup88-201ENSMUST00000035283 Grin2aP35436 1464 aa18.12■□□□□ 0.49
Nup88-201ENSMUST00000035283 Myom3A2ABU4 1439 aa18.11■□□□□ 0.49
Nup88-201ENSMUST00000035283 Dhx57Q6P5D3 1388 aaKnown RBP18.11■□□□□ 0.49
Nup88-201ENSMUST00000035283 Kif14L0N7N1 1674 aaKnown RBP18.11■□□□□ 0.49
Nup88-201ENSMUST00000035283 Soga1E1U8D0 1418 aa18.11■□□□□ 0.49
Nup88-201ENSMUST00000035283 AlkP97793 1621 aa18.1■□□□□ 0.49
Nup88-201ENSMUST00000035283 Fam135aQ6NS59 1506 aa18.1■□□□□ 0.49
Nup88-201ENSMUST00000035283 Card11Q8CIS0 1159 aa18.1■□□□□ 0.49
Nup88-201ENSMUST00000035283 PxdnQ3UQ28 1475 aa18.1■□□□□ 0.49
Nup88-201ENSMUST00000035283 WrnO09053 1401 aa18.1■□□□□ 0.49
Nup88-201ENSMUST00000035283 Mug2P28666 1451 aa18.09■□□□□ 0.49
Nup88-201ENSMUST00000035283 Tcerg1Q8CGF7 1100 aaKnown RBP18.09■□□□□ 0.49
Nup88-201ENSMUST00000035283 Mbd5B1AYB6 1498 aa18.09■□□□□ 0.49
Nup88-201ENSMUST00000035283 Ccdc27Q3V036 639 aa18.09■□□□□ 0.49
Nup88-201ENSMUST00000035283 Ttll5Q8CHB8 1328 aa18.08■□□□□ 0.49
Nup88-201ENSMUST00000035283 Kdm3bQ6ZPY7 1562 aa18.08■□□□□ 0.49
Nup88-201ENSMUST00000035283 Trak1Q6PD31 939 aa18.08■□□□□ 0.49
Nup88-201ENSMUST00000035283 Lamc1P02468 1607 aaKnown RBP18.08■□□□□ 0.48
Nup88-201ENSMUST00000035283 Grwd1Q810D6 446 aaKnown RBP18.08■□□□□ 0.48
Nup88-201ENSMUST00000035283 Ipo9Q91YE6 1041 aa18.08■□□□□ 0.48
Nup88-201ENSMUST00000035283 Adamts12Q811B3 1600 aa18.07■□□□□ 0.48
Nup88-201ENSMUST00000035283 Naip6Q9JIB6 1403 aa18.07■□□□□ 0.48
Nup88-201ENSMUST00000035283 Erbb3Q61526 1339 aa18.06■□□□□ 0.48
Nup88-201ENSMUST00000035283 Il16O54824 1322 aa18.05■□□□□ 0.48
Nup88-201ENSMUST00000035283 Plb1Q3TTY0 1478 aa18.05■□□□□ 0.48
Nup88-201ENSMUST00000035283 Upf2A2AT37 1269 aaKnown RBP18.04■□□□□ 0.48
Nup88-201ENSMUST00000035283 Adcy10Q8C0T9 1614 aa18.03■□□□□ 0.48
Nup88-201ENSMUST00000035283 Kif21bQ9QXL1 1668 aa18.03■□□□□ 0.48
Nup88-201ENSMUST00000035283 Arhgef12Q8R4H2 1543 aaKnown RBP18.02■□□□□ 0.48
Nup88-201ENSMUST00000035283 Map3k4O08648 1597 aa18.01■□□□□ 0.47
Nup88-201ENSMUST00000035283 Cdk13Q69ZA1 1511 aaKnown RBP18.01■□□□□ 0.47
Nup88-201ENSMUST00000035283 Supt6hQ62383 1726 aaKnown RBP18.01■□□□□ 0.47
Nup88-201ENSMUST00000035283 Rpgrip1lQ8CG73 1264 aa17.99■□□□□ 0.47
Nup88-201ENSMUST00000035283 Wdr7Q920I9 1489 aa17.99■□□□□ 0.47
Nup88-201ENSMUST00000035283 Rapgef6Q5NCJ1 1609 aa17.98■□□□□ 0.47
Nup88-201ENSMUST00000035283 Kank1E9Q238 1360 aa17.97■□□□□ 0.47
Nup88-201ENSMUST00000035283 Zfp444Q3TDV8 331 aaKnown RBP17.96■□□□□ 0.47
Nup88-201ENSMUST00000035283 Cc2d2bA0A286YDU8 1405 aa17.96■□□□□ 0.47
Nup88-201ENSMUST00000035283 Zbtb4Q5F293 982 aa17.95■□□□□ 0.46
Nup88-201ENSMUST00000035283 Hdac5Q9Z2V6 1113 aa17.95■□□□□ 0.46
Nup88-201ENSMUST00000035283 Arhgef11Q68FM7 1552 aa17.94■□□□□ 0.46
Nup88-201ENSMUST00000035283 Cdc42bpaQ3UU96 1719 aa17.93■□□□□ 0.46
Nup88-201ENSMUST00000035283 RalgapbQ8BQZ4 1484 aa17.93■□□□□ 0.46
Nup88-201ENSMUST00000035283 Q7TT23 1179 aa17.93■□□□□ 0.46
Nup88-201ENSMUST00000035283 Abca16E9PWJ7 1678 aa17.92■□□□□ 0.46
Nup88-201ENSMUST00000035283 Nup155Q99P88 1391 aaKnown RBP17.92■□□□□ 0.46
Nup88-201ENSMUST00000035283 ChgaP26339 463 aaKnown RBP17.92■□□□□ 0.46
Nup88-201ENSMUST00000035283 Rad21Q61550 635 aaKnown RBP17.91■□□□□ 0.46
Nup88-201ENSMUST00000035283 Kiaa1551Q5DTW7 1521 aa17.9■□□□□ 0.46
Nup88-201ENSMUST00000035283 Zscan21Q07231 555 aa17.9■□□□□ 0.46
Nup88-201ENSMUST00000035283 Tdrd9Q14BI7 1383 aa17.89■□□□□ 0.45
Nup88-201ENSMUST00000035283 Rock2P70336 1388 aa17.88■□□□□ 0.45
Nup88-201ENSMUST00000035283 Map4P27546 1125 aaKnown RBP17.88■□□□□ 0.45
Nup88-201ENSMUST00000035283 Iqcf3Q9D498 203 aa17.88■□□□□ 0.45
Nup88-201ENSMUST00000035283 Setd1bQ8CFT2 1985 aa17.87■□□□□ 0.45
Nup88-201ENSMUST00000035283 Mak16Q8BGS0 296 aaKnown RBP17.87■□□□□ 0.45
Nup88-201ENSMUST00000035283 Zbtb7cQ8VCZ7 619 aa17.87■□□□□ 0.45
Nup88-201ENSMUST00000035283 Mink1Q9JM52 1308 aa17.87■□□□□ 0.45
Nup88-201ENSMUST00000035283 Arhgap31A6X8Z5 1425 aa17.87■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms