RNA–Protein interactions for RNA: ENSMUST00000031971.12

Ssbp1-201, Transcript of Single-stranded DNA-binding protein, mitochondrial, mousemouse

TSL 1 (best) BASIC

Gene Ssbp1, Length 1,063 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1-201ENSMUST00000031971 Gga1Q8R0H9 635 aa13.47□□□□□ -0.25
Ssbp1-201ENSMUST00000031971 Golga3P55937 1487 aa13.47□□□□□ -0.25
Ssbp1-201ENSMUST00000031971 Ankrd65F6YK91 380 aa13.46□□□□□ -0.25
Ssbp1-201ENSMUST00000031971 Nap1l5Q9JJF0 156 aa13.46□□□□□ -0.25
Ssbp1-201ENSMUST00000031971 Kif15Q6P9L6 1387 aa13.45□□□□□ -0.26
Ssbp1-201ENSMUST00000031971 Top2bQ64511 1612 aa13.45□□□□□ -0.26
Ssbp1-201ENSMUST00000031971 Rsf1E9PWW9 1441 aaKnown RBP13.45□□□□□ -0.26
Ssbp1-201ENSMUST00000031971 Lamc3Q9R0B6 1581 aa13.45□□□□□ -0.26
Ssbp1-201ENSMUST00000031971 Cux2P70298 1426 aa13.42□□□□□ -0.26
Ssbp1-201ENSMUST00000031971 Apba1B2RUJ5 842 aa13.42□□□□□ -0.26
Ssbp1-201ENSMUST00000031971 Rnf166Q3U9F6 237 aa13.41□□□□□ -0.26
Ssbp1-201ENSMUST00000031971 Smpd1Q04519 627 aa13.4□□□□□ -0.26
Ssbp1-201ENSMUST00000031971 Cngb1E1AZ71 1325 aa13.37□□□□□ -0.27
Ssbp1-201ENSMUST00000031971 TnnQ80Z71 1560 aa13.37□□□□□ -0.27
Ssbp1-201ENSMUST00000031971 Dnm1lQ8K1M6 742 aa13.36□□□□□ -0.27
Ssbp1-201ENSMUST00000031971 Tox2A2A472 547 aa13.35□□□□□ -0.27
Ssbp1-201ENSMUST00000031971 Otop3Q80UF9 577 aa13.35□□□□□ -0.27
Ssbp1-201ENSMUST00000031971 Myt1lP97500 1187 aa13.34□□□□□ -0.27
Ssbp1-201ENSMUST00000031971 Slc4a2P13808 1237 aaKnown RBP13.32□□□□□ -0.28
Ssbp1-201ENSMUST00000031971 Ano8Q6PB70 1060 aa13.3□□□□□ -0.28
Ssbp1-201ENSMUST00000031971 Setdb2Q8C267 713 aa13.3□□□□□ -0.28
Ssbp1-201ENSMUST00000031971 Kif21aQ9QXL2 1672 aa13.3□□□□□ -0.28
Ssbp1-201ENSMUST00000031971 Rgl2Q61193 778 aa13.29□□□□□ -0.28
Ssbp1-201ENSMUST00000031971 Stk24Q99KH8 431 aa13.29□□□□□ -0.28
Ssbp1-201ENSMUST00000031971 Mier1Q5UAK0 511 aa13.28□□□□□ -0.28
Ssbp1-201ENSMUST00000031971 Rsph6aQ8CDR2 708 aa13.25□□□□□ -0.29
Ssbp1-201ENSMUST00000031971 Fmn1Q05860 1466 aa13.24□□□□□ -0.29
Ssbp1-201ENSMUST00000031971 Ccdc88bQ4QRL3 1481 aa13.23□□□□□ -0.29
Ssbp1-201ENSMUST00000031971 Sptlc1O35704 473 aa13.23□□□□□ -0.29
Ssbp1-201ENSMUST00000031971 Mnx1Q9QZW9 404 aa13.23□□□□□ -0.29
Ssbp1-201ENSMUST00000031971 Lrriq1Q0P5X1 1673 aa13.23□□□□□ -0.29
Ssbp1-201ENSMUST00000031971 Camsap1A2AHC3 1581 aa13.23□□□□□ -0.29
Ssbp1-201ENSMUST00000031971 Hoxa2P31245 372 aa13.22□□□□□ -0.29
Ssbp1-201ENSMUST00000031971 Kdm2aP59997 1161 aa13.22□□□□□ -0.29
Ssbp1-201ENSMUST00000031971 Neurod1Q60867 357 aa13.22□□□□□ -0.29
Ssbp1-201ENSMUST00000031971 Stk25Q9Z2W1 426 aa13.21□□□□□ -0.29
Ssbp1-201ENSMUST00000031971 Npm1Q61937 292 aaKnown RBP13.19□□□□□ -0.3
Ssbp1-201ENSMUST00000031971 Cypt1Q8CH20 168 aa13.19□□□□□ -0.3
Ssbp1-201ENSMUST00000031971 Il27Q8K3I6 234 aa13.19□□□□□ -0.3
Ssbp1-201ENSMUST00000031971 Cep164Q5DU05 1446 aa13.17□□□□□ -0.3
Ssbp1-201ENSMUST00000031971 Dhx29Q6PGC1 1365 aaKnown RBP13.16□□□□□ -0.3
Ssbp1-201ENSMUST00000031971 Ccdc18Q640L5 1455 aa13.15□□□□□ -0.3
Ssbp1-201ENSMUST00000031971 LrpprcQ6PB66 1392 aaKnown RBP13.13□□□□□ -0.31
Ssbp1-201ENSMUST00000031971 Urb2E9Q7L1 1524 aaKnown RBP13.13□□□□□ -0.31
Ssbp1-201ENSMUST00000031971 UncxO08934 530 aa13.11□□□□□ -0.31
Ssbp1-201ENSMUST00000031971 Plb1Q3TTY0 1478 aa13.1□□□□□ -0.31
Ssbp1-201ENSMUST00000031971 Fmr1nbQ80ZA7 238 aa13.1□□□□□ -0.31
Ssbp1-201ENSMUST00000031971 Onecut3Q8K557 490 aa13.1□□□□□ -0.31
Ssbp1-201ENSMUST00000031971 Prdm10Q3UTQ7 1184 aa13.09□□□□□ -0.31
Ssbp1-201ENSMUST00000031971 PogzQ8BZH4 1409 aaKnown RBP13.09□□□□□ -0.31
Ssbp1-201ENSMUST00000031971 Erich4Q3UNU4 136 aa13.07□□□□□ -0.32
Ssbp1-201ENSMUST00000031971 Grin2bQ01097 1482 aa13.06□□□□□ -0.32
Ssbp1-201ENSMUST00000031971 Top2aQ01320 1528 aaKnown RBP13.06□□□□□ -0.32
Ssbp1-201ENSMUST00000031971 Lhx6Q9R1R0 363 aa13.05□□□□□ -0.32
Ssbp1-201ENSMUST00000031971 Crocc2F6XLV1 1638 aa13.05□□□□□ -0.32
Ssbp1-201ENSMUST00000031971 Duox2A2AQ99 1517 aa13.03□□□□□ -0.32
Ssbp1-201ENSMUST00000031971 Lrrc14bQ3UJB3 510 aa13.03□□□□□ -0.32
Ssbp1-201ENSMUST00000031971 Eif4g3Q80XI3 1579 aaKnown RBP13.02□□□□□ -0.33
Ssbp1-201ENSMUST00000031971 Pbx2O35984 430 aa13□□□□□ -0.33
Ssbp1-201ENSMUST00000031971 GcgrQ61606 485 aa13□□□□□ -0.33
Ssbp1-201ENSMUST00000031971 PtprkP35822 1457 aa12.99□□□□□ -0.33
Ssbp1-201ENSMUST00000031971 Gm11939A2A592 99 aa12.99□□□□□ -0.33
Ssbp1-201ENSMUST00000031971 Sgip1Q8VD37 806 aa12.99□□□□□ -0.33
Ssbp1-201ENSMUST00000031971 Crim1Q9JLL0 1037 aa12.99□□□□□ -0.33
Ssbp1-201ENSMUST00000031971 Samd9lQ69Z37 1561 aa12.98□□□□□ -0.33
Ssbp1-201ENSMUST00000031971 Pcdhb20Q91XZ9 799 aa12.98□□□□□ -0.33
Ssbp1-201ENSMUST00000031971 Disp1Q3TDN0 1521 aa12.94□□□□□ -0.34
Ssbp1-201ENSMUST00000031971 Gabbr2Q80T41 940 aa12.94□□□□□ -0.34
Ssbp1-201ENSMUST00000031971 Znf354bQ9QXT9 601 aa12.94□□□□□ -0.34
Ssbp1-201ENSMUST00000031971 NrkQ9R0G8 1455 aa12.92□□□□□ -0.34
Ssbp1-201ENSMUST00000031971 Ift140E9PY46 1464 aa12.91□□□□□ -0.34
Ssbp1-201ENSMUST00000031971 Efcab5A0JP43 1406 aa12.91□□□□□ -0.34
Ssbp1-201ENSMUST00000031971 Klra4Q60651 263 aa12.91□□□□□ -0.34
Ssbp1-201ENSMUST00000031971 Rad54l2Q99NG0 1466 aa12.91□□□□□ -0.34
Ssbp1-201ENSMUST00000031971 Shroom4Q1W617 1475 aa12.9□□□□□ -0.34
Ssbp1-201ENSMUST00000031971 1700006A11RikB9EHI3 544 aa12.89□□□□□ -0.35
Ssbp1-201ENSMUST00000031971 HrcG5E8J6 738 aa12.88□□□□□ -0.35
Ssbp1-201ENSMUST00000031971 Inpp5dQ9ES52 1191 aa12.88□□□□□ -0.35
Ssbp1-201ENSMUST00000031971 Rusc2Q80U22 1514 aa12.88□□□□□ -0.35
Ssbp1-201ENSMUST00000031971 Slc24a1Q91WD8 1130 aa12.86□□□□□ -0.35
Ssbp1-201ENSMUST00000031971 Setd1bQ8CFT2 1985 aa12.86□□□□□ -0.35
Ssbp1-201ENSMUST00000031971 Nup160Q9Z0W3 1402 aaKnown RBP12.86□□□□□ -0.35
Ssbp1-201ENSMUST00000031971 Magi3Q9EQJ9 1476 aa12.85□□□□□ -0.35
Ssbp1-201ENSMUST00000031971 Skiv2lQ6NZR5 1244 aa12.85□□□□□ -0.35
Ssbp1-201ENSMUST00000031971 Myt1Q8CFC2 1127 aa12.84□□□□□ -0.35
Ssbp1-201ENSMUST00000031971 Noa1Q9JJG9 693 aaKnown RBP12.83□□□□□ -0.36
Ssbp1-201ENSMUST00000031971 Erbb3Q61526 1339 aa12.82□□□□□ -0.36
Ssbp1-201ENSMUST00000031971 Speer2E9Q9U2 264 aa12.8□□□□□ -0.36
Ssbp1-201ENSMUST00000031971 Grin2aP35436 1464 aa12.79□□□□□ -0.36
Ssbp1-201ENSMUST00000031971 Pla2r1Q62028 1487 aa12.79□□□□□ -0.36
Ssbp1-201ENSMUST00000031971 IncenpQ9WU62 880 aa12.79□□□□□ -0.36
Ssbp1-201ENSMUST00000031971 Rapgef2Q8CHG7 1496 aa12.78□□□□□ -0.36
Ssbp1-201ENSMUST00000031971 Emid1Q91VF5 444 aa12.78□□□□□ -0.36
Ssbp1-201ENSMUST00000031971 Pdcd7Q9WTY1 482 aa12.78□□□□□ -0.36
Ssbp1-201ENSMUST00000031971 SynmQ70IV5 1561 aa12.77□□□□□ -0.36
Ssbp1-201ENSMUST00000031971 ZyxQ62523 564 aa12.77□□□□□ -0.37
Ssbp1-201ENSMUST00000031971 Eya1P97767 591 aa12.76□□□□□ -0.37
Ssbp1-201ENSMUST00000031971 Shroom2A2ALU4 1481 aa12.76□□□□□ -0.37
Ssbp1-201ENSMUST00000031971 Pbrm1Q8BSQ9 1634 aaKnown RBP12.76□□□□□ -0.37
Ssbp1-201ENSMUST00000031971 Cc2d2bA0A286YDU8 1405 aa12.74□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 58.5 ms