RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C MPT5P39016 859 aaKnown RBP RIP-Chip data8.45□□□□□ -1.06 RIP-Chip
RPD3YNL330C MTW1P39731 289 aa8.45□□□□□ -1.06
RPD3YNL330C YER034WP40022 185 aaKnown RBP8.45□□□□□ -1.06
RPD3YNL330C KRE29P40026 464 aa8.45□□□□□ -1.06
RPD3YNL330C GTS1P40956 396 aa8.45□□□□□ -1.06
RPD3YNL330C PTR3P43606 678 aa8.45□□□□□ -1.06
RPD3YNL330C NUP85P46673 744 aa8.45□□□□□ -1.06
RPD3YNL330C STB2P46679 850 aa8.45□□□□□ -1.06
RPD3YNL330C SIP4P46954 829 aa8.45□□□□□ -1.06
RPD3YNL330C COG1P53079 417 aa8.45□□□□□ -1.06
RPD3YNL330C MON1P53129 644 aa8.45□□□□□ -1.06
RPD3YNL330C SLD3P53135 668 aa8.45□□□□□ -1.06
RPD3YNL330C GPI17Q04080 534 aa8.45□□□□□ -1.06
RPD3YNL330C YLL032CQ07834 825 aaKnown RBP RIP-Chip data8.45□□□□□ -1.06not detected
RPD3YNL330C YOR389WQ08912 624 aa8.45□□□□□ -1.06
RPD3YNL330C MRN1Q08925 612 aaKnown RBP RIP-Chip data8.45□□□□□ -1.06not detected
RPD3YNL330C MCD1Q12158 566 aa8.45□□□□□ -1.06
RPD3YNL330C LPX1Q12405 387 aaKnown RBP8.45□□□□□ -1.06
RPD3YNL330C MDM12Q92328 271 aa8.45□□□□□ -1.06
RPD3YNL330C MET17P06106 444 aa8.44□□□□□ -1.06
RPD3YNL330C SPS1P08458 490 aa8.44□□□□□ -1.06
RPD3YNL330C MRPL8P22353 238 aa8.44□□□□□ -1.06
RPD3YNL330C BUD23P25627 275 aaPredicted RBP8.44□□□□□ -1.06
RPD3YNL330C POT1P27796 417 aaKnown RBP RIP-Chip data8.44□□□□□ -1.06not detected
RPD3YNL330C NTG1P31378 399 aa8.44□□□□□ -1.06
RPD3YNL330C NUP2P32499 720 aa8.44□□□□□ -1.06
RPD3YNL330C GAB1P41733 394 aa8.44□□□□□ -1.06
RPD3YNL330C IME4P41833 600 aa8.44□□□□□ -1.06
RPD3YNL330C TES1P41903 349 aaKnown RBP8.44□□□□□ -1.06
RPD3YNL330C FAR7P43592 221 aa8.44□□□□□ -1.06
RPD3YNL330C YJL055WP47044 245 aa8.44□□□□□ -1.06
RPD3YNL330C YPT32P51996 222 aaKnown RBP8.44□□□□□ -1.06
RPD3YNL330C CAF120P53836 1060 aa8.44□□□□□ -1.06
RPD3YNL330C RPL34AP87262 121 aaPredicted RBP8.44□□□□□ -1.06
RPD3YNL330C RPN4Q03465 531 aa8.44□□□□□ -1.06
RPD3YNL330C HER2Q03557 464 aa8.44□□□□□ -1.06
RPD3YNL330C YMR010WQ03687 405 aa8.44□□□□□ -1.06
RPD3YNL330C PPN1Q04119 674 aa8.44□□□□□ -1.06
RPD3YNL330C ERB1Q04660 807 aaKnown RBP8.44□□□□□ -1.06
RPD3YNL330C VTA1Q06263 330 aa8.44□□□□□ -1.06
RPD3YNL330C FMP45Q07651 309 aa8.44□□□□□ -1.06
RPD3YNL330C YLL007CQ07799 665 aa8.44□□□□□ -1.06
RPD3YNL330C PUS7Q08647 676 aaKnown RBP8.44□□□□□ -1.06
RPD3YNL330C UPC2Q12151 913 aa8.44□□□□□ -1.06
RPD3YNL330C RAS2P01120 322 aaKnown RBP8.43□□□□□ -1.06
RPD3YNL330C SST2P11972 698 aaKnown RBP8.43□□□□□ -1.06
RPD3YNL330C RSR1P13856 272 aa8.43□□□□□ -1.06
RPD3YNL330C CBS2P14905 389 aa8.43□□□□□ -1.06
RPD3YNL330C ADK2P26364 225 aa8.43□□□□□ -1.06
RPD3YNL330C PPZ1P26570 692 aa8.43□□□□□ -1.06
RPD3YNL330C AAR2P32357 355 aaPredicted RBP8.43□□□□□ -1.06
RPD3YNL330C MRPL6P32904 214 aa8.43□□□□□ -1.06
RPD3YNL330C THI80P35202 319 aa8.43□□□□□ -1.06
RPD3YNL330C ECM8P38246 354 aa8.43□□□□□ -1.06
RPD3YNL330C YLF2P38746 405 aa8.43□□□□□ -1.06
RPD3YNL330C MTG2P38860 518 aa8.43□□□□□ -1.06
RPD3YNL330C RSP5P39940 809 aaKnown RBP8.43□□□□□ -1.06
RPD3YNL330C RMD8P43620 662 aa8.43□□□□□ -1.06
RPD3YNL330C BFA1P47113 574 aa8.43□□□□□ -1.06
RPD3YNL330C YNL143CP53908 130 aa8.43□□□□□ -1.06
RPD3YNL330C IDP3P53982 420 aaKnown RBP8.43□□□□□ -1.06
RPD3YNL330C CIK1Q01649 594 aa8.43□□□□□ -1.06
RPD3YNL330C IRC15Q02733 499 aa8.43□□□□□ -1.06
RPD3YNL330C FMP30Q02883 468 aa8.43□□□□□ -1.06
RPD3YNL330C ARP10Q04549 284 aa8.43□□□□□ -1.06
RPD3YNL330C GAL83Q04739 417 aa8.43□□□□□ -1.06
RPD3YNL330C BCH1Q05029 724 aa8.43□□□□□ -1.06
RPD3YNL330C MFG1Q07684 458 aa8.43□□□□□ -1.06
RPD3YNL330C NTG2Q08214 380 aa8.43□□□□□ -1.06
RPD3YNL330C SOG2Q08817 791 aa8.43□□□□□ -1.06
RPD3YNL330C NDJ1Q12366 352 aa8.43□□□□□ -1.06
RPD3YNL330C MHF1Q3E835 90 aa8.43□□□□□ -1.06
RPD3YNL330C RIB3Q99258 208 aa8.43□□□□□ -1.06
RPD3YNL330C MF(ALPHA)1P01149 165 aa8.42□□□□□ -1.06
RPD3YNL330C TEC1P18412 486 aa8.42□□□□□ -1.06
RPD3YNL330C CRM1P30822 1084 aaKnown RBP8.42□□□□□ -1.06
RPD3YNL330C RPN2P32565 945 aaKnown RBP8.42□□□□□ -1.06
RPD3YNL330C HBS1P32769 611 aaKnown RBP8.42□□□□□ -1.06
RPD3YNL330C SGE1P33335 543 aa8.42□□□□□ -1.06
RPD3YNL330C RIB1P38066 345 aa8.42□□□□□ -1.06
RPD3YNL330C ETP1P38748 585 aaKnown RBP8.42□□□□□ -1.06
RPD3YNL330C BTT1P40314 149 aaPredicted RBP8.42□□□□□ -1.06
RPD3YNL330C CSN12P47130 423 aa8.42□□□□□ -1.06
RPD3YNL330C TOM22P49334 152 aa8.42□□□□□ -1.06
RPD3YNL330C ORM1P53224 222 aa8.42□□□□□ -1.06
RPD3YNL330C COQ6P53318 479 aa8.42□□□□□ -1.06
RPD3YNL330C IPI3P53877 555 aa8.42□□□□□ -1.06
RPD3YNL330C PML39Q03760 334 aa8.42□□□□□ -1.06
RPD3YNL330C APC4Q04601 652 aa8.42□□□□□ -1.06
RPD3YNL330C MRI1Q06489 411 aaKnown RBP8.42□□□□□ -1.06
RPD3YNL330C YDR524C-BQ3E6R4 66 aa8.42□□□□□ -1.06
RPD3YNL330C FRT1Q99332 602 aa8.42□□□□□ -1.06
RPD3YNL330C TY4B-PA0A0B7P3V8 1104 aa8.41□□□□□ -1.06
RPD3YNL330C HTA1P04911 132 aaKnown RBP8.41□□□□□ -1.06
RPD3YNL330C MAS1P10507 462 aa8.41□□□□□ -1.06
RPD3YNL330C YAP1P19880 650 aaKnown RBP8.41□□□□□ -1.06
RPD3YNL330C CAD1P24813 409 aaKnown RBP8.41□□□□□ -1.06
RPD3YNL330C GBP2P25555 427 aaKnown RBP RIP-Chip data8.41□□□□□ -1.06not detected
RPD3YNL330C LRG1P35688 1017 aa8.41□□□□□ -1.06
RPD3YNL330C YBR139WP38109 508 aa8.41□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms