RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W MSO1P53604 210 aaKnown RBP2.28□□□□□ -2.04
SEC22YLR268W RSM23Q01163 450 aa2.28□□□□□ -2.04
SEC22YLR268W YVH1Q02256 364 aaKnown RBP2.28□□□□□ -2.04
SEC22YLR268W NGL3Q03210 505 aa2.28□□□□□ -2.04
SEC22YLR268W DPB4Q04603 196 aaKnown RBP2.28□□□□□ -2.04
SEC22YLR268W YDL012CQ12489 107 aa2.28□□□□□ -2.04
SEC22YLR268W YER078W-AQ3E7A2 54 aa2.28□□□□□ -2.04
SEC22YLR268W SUP35P05453 685 aaKnown RBP2.27□□□□□ -2.05
SEC22YLR268W APE1P14904 514 aa2.27□□□□□ -2.05
SEC22YLR268W HSC82P15108 705 aaKnown RBP2.27□□□□□ -2.05
SEC22YLR268W OLE1P21147 510 aaKnown RBP2.27□□□□□ -2.05
SEC22YLR268W SGF29P25554 259 aa2.27□□□□□ -2.05
SEC22YLR268W YME1P32795 747 aa2.27□□□□□ -2.05
SEC22YLR268W PAD1P33751 242 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
SEC22YLR268W PMU1P36069 295 aa2.27□□□□□ -2.05
SEC22YLR268W AUR1P36107 401 aaPredicted RBP2.27□□□□□ -2.05
SEC22YLR268W RFS1P38234 210 aaKnown RBP2.27□□□□□ -2.05
SEC22YLR268W SHO1P40073 367 aa2.27□□□□□ -2.05
SEC22YLR268W YGR210CP42942 411 aa2.27□□□□□ -2.05
SEC22YLR268W FAR3P46671 204 aa2.27□□□□□ -2.05
SEC22YLR268W PYK2P52489 506 aaKnown RBP2.27□□□□□ -2.05
SEC22YLR268W DSD1P53095 428 aa2.27□□□□□ -2.05
SEC22YLR268W LCL3P53153 274 aa2.27□□□□□ -2.05
SEC22YLR268W YGR127WP53275 312 aa2.27□□□□□ -2.05
SEC22YLR268W YMR087WQ04299 284 aa2.27□□□□□ -2.05
SEC22YLR268W IMH1Q06704 911 aaKnown RBP2.27□□□□□ -2.05
SEC22YLR268W TEN1Q07921 160 aa2.27□□□□□ -2.05
SEC22YLR268W ETT1Q08421 412 aaKnown RBP2.27□□□□□ -2.05
SEC22YLR268W FMP40Q08968 688 aaPredicted RBP2.27□□□□□ -2.05
SEC22YLR268W RCN2Q12044 265 aa2.27□□□□□ -2.05
SEC22YLR268W NMD4Q12129 218 aa2.27□□□□□ -2.05
SEC22YLR268W MF(ALPHA)1P01149 165 aa2.26□□□□□ -2.05
SEC22YLR268W GCN4P03069 281 aa2.26□□□□□ -2.05
SEC22YLR268W PEP5P12868 1029 aa2.26□□□□□ -2.05
SEC22YLR268W YIM1P28625 365 aa2.26□□□□□ -2.05
SEC22YLR268W RPN12P32496 274 aa2.26□□□□□ -2.05
SEC22YLR268W SSE2P32590 693 aaKnown RBP2.26□□□□□ -2.05
SEC22YLR268W YKL100CP34248 587 aa2.26□□□□□ -2.05
SEC22YLR268W OSH3P38713 996 aaKnown RBP2.26□□□□□ -2.05
SEC22YLR268W ALG8P40351 577 aa2.26□□□□□ -2.05
SEC22YLR268W ALT2P52892 507 aa2.26□□□□□ -2.05
SEC22YLR268W EFM6P53970 246 aa2.26□□□□□ -2.05
SEC22YLR268W RHO4Q00246 291 aa2.26□□□□□ -2.05
SEC22YLR268W SHR3Q02774 210 aa2.26□□□□□ -2.05
SEC22YLR268W COG4Q06096 861 aa2.26□□□□□ -2.05
SEC22YLR268W LUC7Q07508 261 aaPredicted RBP2.26□□□□□ -2.05
SEC22YLR268W YOR387CQ08910 206 aa2.26□□□□□ -2.05
SEC22YLR268W CTI6Q08923 506 aa2.26□□□□□ -2.05
SEC22YLR268W YPL272CQ08984 517 aa2.26□□□□□ -2.05
SEC22YLR268W YDL009CQ12210 107 aa2.26□□□□□ -2.05
SEC22YLR268W MED1Q12321 566 aa2.26□□□□□ -2.05
SEC22YLR268W SPE4Q12455 300 aa2.26□□□□□ -2.05
SEC22YLR268W CBS1P14066 229 aa2.25□□□□□ -2.05
SEC22YLR268W MET8P15807 274 aa2.25□□□□□ -2.05
SEC22YLR268W SUI2P20459 304 aaKnown RBP2.25□□□□□ -2.05
SEC22YLR268W PUP3P25451 205 aaKnown RBP2.25□□□□□ -2.05
SEC22YLR268W IMG1P25626 169 aa2.25□□□□□ -2.05
SEC22YLR268W PEP3P27801 918 aa2.25□□□□□ -2.05
SEC22YLR268W FUN19P28003 413 aaPredicted RBP2.25□□□□□ -2.05
SEC22YLR268W YBL055CP34220 418 aaPredicted RBP2.25□□□□□ -2.05
SEC22YLR268W YKL023WP36103 277 aaKnown RBP2.25□□□□□ -2.05
SEC22YLR268W NUP133P36161 1157 aa2.25□□□□□ -2.05
SEC22YLR268W NDT80P38830 627 aa2.25□□□□□ -2.05
SEC22YLR268W CCT6P39079 546 aa2.25□□□□□ -2.05
SEC22YLR268W VPS52P39904 641 aa2.25□□□□□ -2.05
SEC22YLR268W RPS10BP46784 105 aaKnown RBP2.25□□□□□ -2.05
SEC22YLR268W MRX6P48564 524 aa2.25□□□□□ -2.05
SEC22YLR268W APT1P49435 187 aaKnown RBP2.25□□□□□ -2.05
SEC22YLR268W VID30P53076 958 aa2.25□□□□□ -2.05
SEC22YLR268W YGR066CP53242 292 aa2.25□□□□□ -2.05
SEC22YLR268W WSC2P53832 503 aa2.25□□□□□ -2.05
SEC22YLR268W VPS75P53853 264 aa2.25□□□□□ -2.05
SEC22YLR268W TIM10P87108 93 aa2.25□□□□□ -2.05
SEC22YLR268W MRPL51Q06090 140 aaPredicted RBP2.25□□□□□ -2.05
SEC22YLR268W RTT109Q07794 436 aa2.25□□□□□ -2.05
SEC22YLR268W YEH1Q07804 573 aa2.25□□□□□ -2.05
SEC22YLR268W SGS1P35187 1447 aa2.25□□□□□ -2.05
SEC22YLR268W LPD1P09624 499 aaKnown RBP2.24□□□□□ -2.05
SEC22YLR268W MRP7P12687 371 aa2.24□□□□□ -2.05
SEC22YLR268W EXO70P19658 623 aa2.24□□□□□ -2.05
SEC22YLR268W KGD1P20967 1014 aaKnown RBP2.24□□□□□ -2.05
SEC22YLR268W BUD5P25300 642 aaPredicted RBP2.24□□□□□ -2.05
SEC22YLR268W OCA4P25366 362 aa2.24□□□□□ -2.05
SEC22YLR268W BOS1P25385 244 aa2.24□□□□□ -2.05
SEC22YLR268W NAM9P27929 486 aa2.24□□□□□ -2.05
SEC22YLR268W SYN8P31377 255 aa2.24□□□□□ -2.05
SEC22YLR268W YBL059WP34224 193 aa2.24□□□□□ -2.05
SEC22YLR268W UBP11P36026 717 aa2.24□□□□□ -2.05
SEC22YLR268W REG2P38232 338 aa2.24□□□□□ -2.05
SEC22YLR268W ICS2P38284 255 aa2.24□□□□□ -2.05
SEC22YLR268W YBR225WP38321 900 aa2.24□□□□□ -2.05
SEC22YLR268W ERP2P39704 215 aa2.24□□□□□ -2.05
SEC22YLR268W SIM1P40472 476 aa2.24□□□□□ -2.05
SEC22YLR268W ELP2P42935 788 aa2.24□□□□□ -2.05
SEC22YLR268W RMD8P43620 662 aa2.24□□□□□ -2.05
SEC22YLR268W RLI1Q03195 608 aaKnown RBP2.24□□□□□ -2.05
SEC22YLR268W RRN11Q04712 507 aa2.24□□□□□ -2.05
SEC22YLR268W MFB1Q04922 465 aa2.24□□□□□ -2.05
SEC22YLR268W VPS74Q06385 345 aa2.24□□□□□ -2.05
SEC22YLR268W TSR2Q06672 205 aaKnown RBP2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms